##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062194_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 878083 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.28678951761963 32.0 32.0 32.0 32.0 32.0 2 31.47010931768409 32.0 32.0 32.0 32.0 32.0 3 31.588870300415792 32.0 32.0 32.0 32.0 32.0 4 31.66307740839989 32.0 32.0 32.0 32.0 32.0 5 31.64362822193346 32.0 32.0 32.0 32.0 32.0 6 35.28467582221726 36.0 36.0 36.0 36.0 36.0 7 35.29339595459655 36.0 36.0 36.0 36.0 36.0 8 35.24800389029283 36.0 36.0 36.0 36.0 36.0 9 35.3219194540835 36.0 36.0 36.0 36.0 36.0 10 35.21038671742876 36.0 36.0 36.0 36.0 36.0 11 35.326512413974534 36.0 36.0 36.0 36.0 36.0 12 35.2422709470517 36.0 36.0 36.0 36.0 36.0 13 35.27687359850948 36.0 36.0 36.0 36.0 36.0 14 35.24650175438996 36.0 36.0 36.0 36.0 36.0 15 35.222365083938534 36.0 36.0 36.0 36.0 36.0 16 35.24120271090546 36.0 36.0 36.0 36.0 36.0 17 35.217198146416685 36.0 36.0 36.0 36.0 36.0 18 35.21582014456492 36.0 36.0 36.0 36.0 36.0 19 35.20111538430877 36.0 36.0 36.0 36.0 36.0 20 35.19279726403996 36.0 36.0 36.0 36.0 36.0 21 35.18997862388863 36.0 36.0 36.0 36.0 36.0 22 35.17327063614715 36.0 36.0 36.0 36.0 36.0 23 35.13737653502004 36.0 36.0 36.0 36.0 36.0 24 35.11898875163282 36.0 36.0 36.0 36.0 36.0 25 35.10320550562988 36.0 36.0 36.0 36.0 36.0 26 35.0650359931806 36.0 36.0 36.0 36.0 36.0 27 35.046861173715925 36.0 36.0 36.0 36.0 36.0 28 35.01800854816686 36.0 36.0 36.0 36.0 36.0 29 34.999945335463735 36.0 36.0 36.0 36.0 36.0 30 34.96940152582387 36.0 36.0 36.0 36.0 36.0 31 34.98706386526103 36.0 36.0 36.0 36.0 36.0 32 34.950666394862445 36.0 36.0 36.0 36.0 36.0 33 34.927691345806714 36.0 36.0 36.0 36.0 36.0 34 34.92019205473742 36.0 36.0 36.0 36.0 36.0 35 34.90754518650287 36.0 36.0 36.0 36.0 36.0 36 34.8756757618585 36.0 36.0 36.0 32.0 36.0 37 34.84956889041241 36.0 36.0 36.0 32.0 36.0 38 34.83134737832301 36.0 36.0 36.0 32.0 36.0 39 34.80029564403365 36.0 36.0 36.0 32.0 36.0 40 34.795552356667876 36.0 36.0 36.0 32.0 36.0 41 34.7702233160191 36.0 36.0 36.0 32.0 36.0 42 34.73722415762519 36.0 36.0 36.0 32.0 36.0 43 34.742715665831135 36.0 36.0 36.0 32.0 36.0 44 34.6782434006808 36.0 36.0 36.0 32.0 36.0 45 34.65690714886861 36.0 36.0 36.0 32.0 36.0 46 34.62108707263437 36.0 36.0 36.0 32.0 36.0 47 34.58981554135543 36.0 36.0 36.0 32.0 36.0 48 34.568636450085016 36.0 36.0 36.0 32.0 36.0 49 34.544216207351695 36.0 36.0 36.0 32.0 36.0 50 34.14670594920981 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 7.0 20 10.0 21 31.0 22 71.0 23 172.0 24 458.0 25 1038.0 26 2254.0 27 4273.0 28 7069.0 29 11061.0 30 16544.0 31 24281.0 32 36343.0 33 61156.0 34 139792.0 35 573522.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.802434367324246 18.17846254801974 12.18790016450891 25.8312029201471 2 16.01840905829535 20.0220717365605 37.69608881539236 26.26343038975179 3 18.91042066686255 23.49871652078052 28.550067078017772 29.040795734339163 4 12.60484487229567 15.77538797585194 35.75538986633382 35.864377285518565 5 14.413785484971239 36.85209712521482 33.275555955416515 15.45856143439743 6 34.588231810577405 35.35183053005481 16.487354782428458 13.572582876939318 7 30.507480500134953 30.2225416048369 20.074525984445664 19.195451910582484 8 27.879482919040683 33.76002040809354 18.939211896825242 19.421284776040533 9 27.179662970357015 14.363790211175937 18.687413376639796 39.76913344182725 10 16.481300109329446 26.753598760932945 31.112313228862977 25.652787900874635 11 37.41388911982125 21.125793347553707 22.131734699339354 19.328582833285694 12 24.66281661300811 23.576928376930198 28.787711412246907 22.972543597814784 13 29.52112727384541 19.609763541715306 25.29339481575204 25.57571436868724 14 23.289142370368175 19.932512074598872 25.056173505238117 31.72217204979484 15 24.955727419845278 27.85169511310434 22.009308914988672 25.183268552061705 16 25.429147035745075 25.95062631038893 23.996132466440947 24.62409418742505 17 23.772012440737377 26.303549892208366 25.340429093832817 24.58400857322144 18 24.43994474326459 25.24260235080283 26.687454375041998 23.62999853089059 19 25.675961926107128 24.881844747984815 25.437487615051896 24.00470571085616 20 25.66753750805737 24.58039035256549 25.38248310514556 24.369589034231584 21 26.517311005907185 24.177554969177173 24.733311087903992 24.57182293701165 22 25.653383563968323 24.775562219061296 25.30546656751127 24.265587649459107 23 24.253857551051553 24.675685555921252 25.85723673046853 25.213220162558663 24 24.614925570308756 24.98892466150463 25.905359097209015 24.490790670977603 25 24.791220855479164 24.64897885274821 25.802972618699187 24.756827673073442 26 24.098287283945975 25.690626925367766 26.175663009820298 24.035422780865957 27 24.68465287900875 25.168891217201168 25.554505284256564 24.591950619533527 28 24.44745356582782 25.020527952750975 25.791536219736216 24.74048226168499 29 24.31264961586731 25.11348598422471 25.630977516906167 24.942886883001815 30 24.32525695413262 25.193292144748458 25.912592887851265 24.568858013267658 31 24.918401326533633 24.834012468140642 25.327248832108307 24.920337373217414 32 24.741450881646514 25.18275815336538 25.12456253637226 24.951228428615842 33 24.325546276482466 24.799648324015667 25.886791765224395 24.988013634277475 34 24.852403903096786 25.00706092438889 25.940583460126277 24.199951712388053 35 25.217918144319096 24.80759200165816 25.988461214328503 23.986028639694243 36 24.151958473126655 25.488621791586663 25.575629610901945 24.783790124384737 37 24.96082290129193 25.163883270467757 25.358060460285355 24.517233367954955 38 24.568634172396003 25.119151606397118 25.503056089230746 24.809158131976133 39 25.219258036044756 24.707114995871652 25.19420322865359 24.879423739430003 40 25.602678571428573 24.909803206997083 25.551316508746357 23.93620171282799 41 24.537709279296823 25.100077100651085 26.10876316661599 24.253450453436106 42 25.36826592136523 25.667229287248556 25.38216059970343 23.582344191682783 43 24.725071977841758 24.756733117096104 25.804625715222855 24.71356918983928 44 24.25941427359334 25.433372624721684 25.321534528019313 24.98567857366566 45 24.615859436214215 25.65633029027497 25.353391096776544 24.374419176734268 46 24.587499715281417 25.1039792269321 25.27492426485661 25.03359679292987 47 24.885544693373664 25.0473765249319 25.609972758498163 24.457106023196275 48 25.19887796950291 25.537241003085242 24.685695933379723 24.578185094032122 49 24.704089616458234 25.73762631640687 24.844969495007703 24.713314572127196 50 24.74799988611451 25.934914443527035 24.737294650229195 24.57979102012926 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 365.0 1 212.5 2 60.0 3 147.5 4 235.0 5 242.0 6 249.0 7 186.5 8 124.0 9 180.5 10 237.0 11 377.0 12 517.0 13 1003.5 14 1490.0 15 1816.5 16 2143.0 17 2161.0 18 2179.0 19 2068.5 20 1958.0 21 2304.5 22 2651.0 23 3058.5 24 3466.0 25 4375.0 26 5284.0 27 7099.5 28 8915.0 29 10585.5 30 12256.0 31 14106.5 32 15957.0 33 18658.5 34 21360.0 35 24747.5 36 28135.0 37 31529.5 38 34924.0 39 37237.0 40 39550.0 41 42278.5 42 45007.0 43 46154.0 44 47301.0 45 51409.5 46 55518.0 47 59387.5 48 63257.0 49 65707.0 50 68157.0 51 66527.5 52 64898.0 53 64029.5 54 63161.0 55 63624.0 56 64087.0 57 61387.5 58 58688.0 59 53475.0 60 48262.0 61 41947.5 62 35633.0 63 30777.0 64 25921.0 65 21696.5 66 17472.0 67 15007.0 68 12542.0 69 11209.0 70 9876.0 71 7834.5 72 5793.0 73 5031.0 74 4269.0 75 3126.5 76 1984.0 77 1776.5 78 1569.0 79 1341.0 80 1113.0 81 886.0 82 659.0 83 566.5 84 474.0 85 357.0 86 240.0 87 154.5 88 69.0 89 51.5 90 34.0 91 26.0 92 18.0 93 11.5 94 5.0 95 7.0 96 9.0 97 9.0 98 9.0 99 6.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03632913972824892 2 0.00421372467067464 3 1.1388445055877404E-4 4 0.0 5 0.0 6 4.5553780223509617E-4 7 0.0 8 0.0 9 0.0 10 3.416533516763222E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 4.5553780223509617E-4 17 0.0 18 0.0 19 1.1388445055877404E-4 20 5.694222527938702E-4 21 0.0 22 0.0 23 0.0 24 6.833067033526444E-4 25 2.2776890111754808E-4 26 4.5553780223509617E-4 27 3.416533516763222E-4 28 0.0013666134067052888 29 1.1388445055877404E-4 30 9.110756044701923E-4 31 5.694222527938702E-4 32 0.0011388445055877405 33 2.2776890111754808E-4 34 0.0012527289561465147 35 1.1388445055877404E-4 36 1.1388445055877404E-4 37 0.002163804560616707 38 0.0 39 9.110756044701923E-4 40 3.416533516763222E-4 41 0.0011388445055877405 42 0.005580338077379929 43 0.003985955769557092 44 0.003188764615645674 45 0.002163804560616707 46 0.002619342362851803 47 0.0012527289561465147 48 0.0036443024178807694 49 0.003416533516763222 50 9.110756044701923E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 878083.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.570612186969065 #Duplication Level Percentage of deduplicated Percentage of total 1 78.78703166897549 47.72178740583964 2 13.314951166220695 16.1298948675517 3 3.7248820122411894 6.7685515141703405 4 1.4961145733589243 3.624823024407844 5 0.7337983807408194 2.222330857163902 6 0.44764831540982836 1.6268599505303232 7 0.2767335994423225 1.173334647164747 8 0.2048143939849568 0.9924586582697527 9 0.14714910503654016 0.8021620237345065 >10 0.7430193682699345 8.2233107796613 >50 0.06570733675764562 2.7654387403158935 >100 0.054374100409545295 6.408548635306769 >500 0.003775979152119731 1.540498895883278 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 888 0.10112939209619136 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 3.4165335167632215E-4 13 0.0 0.0 0.0 1.1388445055877406E-4 4.555378022350962E-4 14 0.0 0.0 0.0 1.1388445055877406E-4 4.555378022350962E-4 15 0.0 0.0 0.0 4.555378022350962E-4 5.694222527938702E-4 16 0.0 0.0 0.0 4.555378022350962E-4 6.833067033526443E-4 17 0.0 0.0 0.0 4.555378022350962E-4 6.833067033526443E-4 18 0.0 0.0 0.0 9.110756044701924E-4 0.0011388445055877405 19 0.0 0.0 0.0 0.0010249600550289665 0.0011388445055877405 20 0.0 0.0 0.0 0.0011388445055877405 0.0011388445055877405 21 0.0 0.0 0.0 0.0012527289561465147 0.0012527289561465147 22 0.0 0.0 0.0 0.0013666134067052886 0.0012527289561465147 23 0.0 0.0 0.0 0.0015943823078228368 0.0012527289561465147 24 0.0 0.0 0.0 0.001822151208940385 0.0012527289561465147 25 0.0 0.0 0.0 0.0019360356594991589 0.0012527289561465147 26 0.0 0.0 0.0 0.0030748801650868993 0.0012527289561465147 27 0.0 0.0 0.0 0.003758186868439544 0.0012527289561465147 28 0.0 0.0 0.0 0.004555378022350962 0.0012527289561465147 29 0.0 0.0 0.0 0.007174720385202765 0.0012527289561465147 30 0.0 0.0 0.0 0.010819022803083535 0.0012527289561465147 31 0.0 0.0 0.0 0.017765974287168754 0.0012527289561465147 32 0.0 0.0 0.0 0.023232427913989908 0.0012527289561465147 33 0.0 0.0 0.0 0.02892665044192861 0.0012527289561465147 34 0.0 0.0 0.0 0.0359874863765726 0.0013666134067052886 35 0.0 0.0 0.0 0.04487047352015698 0.0013666134067052886 36 0.0 0.0 0.0 0.05614503412547561 0.0013666134067052886 37 0.0 0.0 0.0 0.07083612824755746 0.0013666134067052886 38 0.0 0.0 0.0 0.0944102095132237 0.0013666134067052886 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1325 0.0 26.078522 1 GGTATCA 645 0.0 20.814661 1 TAGGACG 540 0.0 20.777939 4 ATACACT 235 0.0 20.595905 4 TACCGAT 75 5.472521E-5 20.532324 7 CGATCAA 65 4.930427E-4 20.307848 10 ATACGAA 230 0.0 20.087112 40 GTAGGAC 495 0.0 20.000154 3 TACCGTC 215 0.0 19.440905 7 TTAGGAC 400 0.0 19.250149 3 GATATAC 230 0.0 19.138212 1 GGACGTG 580 0.0 18.965666 6 CGCAATA 245 0.0 18.85729 36 AAACCGT 70 8.120484E-4 18.857288 6 ACCGTCG 210 0.0 18.856215 8 AACGCAG 1915 0.0 18.49623 6 AATGCCG 120 3.161149E-7 18.332434 18 ATCAACG 1925 0.0 18.285856 3 AGGACGT 605 0.0 18.18196 5 ATACCGT 230 0.0 18.174055 6 >>END_MODULE