##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062190_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2415968 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.217929210982927 32.0 32.0 32.0 32.0 32.0 2 30.68784768672433 32.0 32.0 32.0 32.0 32.0 3 30.72163000503318 32.0 32.0 32.0 32.0 32.0 4 30.726025344706553 32.0 32.0 32.0 32.0 32.0 5 30.618119941985988 32.0 32.0 32.0 32.0 32.0 6 34.28800174505623 36.0 36.0 36.0 32.0 36.0 7 34.21537661094849 36.0 36.0 36.0 32.0 36.0 8 34.15647475463251 36.0 36.0 36.0 32.0 36.0 9 34.322293176068555 36.0 36.0 36.0 32.0 36.0 10 33.94058116663797 36.0 36.0 36.0 32.0 36.0 11 34.31398470509543 36.0 36.0 36.0 32.0 36.0 12 34.09449835428284 36.0 36.0 36.0 32.0 36.0 13 34.208977933482565 36.0 36.0 36.0 32.0 36.0 14 34.09445779083167 36.0 36.0 36.0 32.0 36.0 15 34.04162141220414 36.0 36.0 36.0 32.0 36.0 16 34.03994754897416 36.0 36.0 36.0 32.0 36.0 17 33.9725004635823 36.0 36.0 36.0 32.0 36.0 18 33.97683288851508 36.0 36.0 36.0 32.0 36.0 19 33.98415334971324 36.0 36.0 36.0 32.0 36.0 20 33.972314202837126 36.0 36.0 36.0 32.0 36.0 21 33.95386818037325 36.0 36.0 36.0 32.0 36.0 22 33.92124398998662 36.0 36.0 36.0 32.0 36.0 23 33.88319257539835 36.0 36.0 36.0 32.0 36.0 24 33.861411657770304 36.0 36.0 36.0 32.0 36.0 25 33.49031609690194 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 3.0 4 30.0 5 203.0 6 520.0 7 101.0 8 418.0 9 310.0 10 167.0 11 38.0 12 93.0 13 102.0 14 397.0 15 564.0 16 848.0 17 1218.0 18 1633.0 19 2320.0 20 3579.0 21 5165.0 22 7719.0 23 11463.0 24 16199.0 25 22920.0 26 31118.0 27 39906.0 28 52353.0 29 68801.0 30 89437.0 31 119972.0 32 168241.0 33 235872.0 34 502184.0 35 1032074.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.403720203663745 17.14080174904789 11.646177082820248 25.809300964468118 2 16.92478988727072 19.026807093645807 37.331128555256385 26.717274463827085 3 19.432621412750994 22.52783891077351 27.9771584960469 30.062381180428595 4 13.074913793460308 15.155461541327394 34.903941284342906 36.86568338086939 5 15.138944211147834 36.16064811095994 33.24185493026911 15.458552747623122 6 35.46681632179718 34.474992130680405 16.217673663458193 13.840517884064212 7 31.25203552525046 29.891330920674804 19.766617965991294 19.090015588083446 8 28.49964240104288 33.13794535158649 18.58018711168607 19.782225135684563 9 26.942188830619347 14.66995978227312 18.273517838975764 40.11433354813177 10 16.33437667858114 26.574509108271382 30.904585303421158 26.18652890972632 11 37.38014905205216 21.32376957448043 21.68052458364075 19.61555678982666 12 24.618548565583453 23.473759075713353 28.273328696868894 23.6343636618343 13 29.38606925008227 19.418843389512443 24.968854620913284 26.226232739492012 14 23.582446671849333 19.309357144869907 24.756171545169593 32.35202463811117 15 25.235351508263932 26.987318331513848 21.909926085078833 25.867404075143384 16 25.977294907205 26.01807207696276 23.08199153376445 24.922641482067785 17 24.283281606082447 26.109656246205414 24.726634360791667 24.88042778692047 18 25.00105666281848 25.35336047782707 25.316563749089404 24.329019110265044 19 25.63916334938665 25.159096860157177 24.969713592506537 24.232026197949637 20 25.734397902679074 24.631713527438265 24.61870470215176 25.015183867730904 21 26.4565667981776 24.30534179102066 24.465342387604966 24.772749023196774 22 25.972704405173726 24.162306821246958 24.789900820508613 25.075087953070703 23 24.6312375208159 24.41263949760151 25.26955037655032 25.68657260503227 24 24.79906006385832 24.900021998681737 24.953713696478676 25.347204240981263 25 25.033525433966393 24.553335992997045 24.937081553492177 25.476057019544385 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 343.0 1 343.0 2 557.0 3 771.0 4 771.0 5 771.0 6 1628.5 7 2486.0 8 2486.0 9 2486.0 10 3051.0 11 3616.0 12 3616.0 13 3616.0 14 4984.5 15 6353.0 16 6353.0 17 6353.0 18 10567.5 19 14782.0 20 14782.0 21 14782.0 22 23046.5 23 31311.0 24 31311.0 25 31311.0 26 46201.0 27 61091.0 28 61091.0 29 61091.0 30 76820.5 31 92550.0 32 92550.0 33 92550.0 34 115872.5 35 139195.0 36 139195.0 37 139195.0 38 165708.0 39 192221.0 40 192221.0 41 192221.0 42 221879.5 43 251538.0 44 251538.0 45 251538.0 46 280626.5 47 309715.0 48 309715.0 49 309715.0 50 320713.0 51 331711.0 52 331711.0 53 331711.0 54 313929.5 55 296148.0 56 296148.0 57 296148.0 58 273043.5 59 249939.0 60 249939.0 61 249939.0 62 218664.0 63 187389.0 64 187389.0 65 187389.0 66 153342.5 67 119296.0 68 119296.0 69 119296.0 70 90841.0 71 62386.0 72 62386.0 73 62386.0 74 47180.5 75 31975.0 76 31975.0 77 31975.0 78 25041.0 79 18107.0 80 18107.0 81 18107.0 82 12629.0 83 7151.0 84 7151.0 85 7151.0 86 5270.5 87 3390.0 88 3390.0 89 3390.0 90 2275.0 91 1160.0 92 1160.0 93 1160.0 94 728.0 95 296.0 96 296.0 97 296.0 98 672.0 99 1048.0 100 1048.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0010347819176412933 2 1.241738301169552E-4 3 6.208691505847759E-4 4 0.010678949390058147 5 0.03418919455886833 6 0.06324587080623584 7 0.10703784156081536 8 0.10968688326997708 9 0.11808931244122439 10 0.13311434588537596 11 0.14023364547874806 12 0.13286599822514206 13 0.12789904502046387 14 0.11573000966900224 15 0.1322037377978516 16 0.11808931244122439 17 0.12380130862660432 18 0.11217035987231619 19 0.09702115259804765 20 0.09197141683995814 21 0.0921783732234864 22 0.10202949707943151 23 0.08063020702260958 24 0.09052272215526035 25 0.08812202810633253 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2415968.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.89168847095443 #Duplication Level Percentage of deduplicated Percentage of total 1 78.19844969427892 42.9244493952996 2 12.780090350466574 14.030414762969237 3 3.8017360786456087 6.2605113743340794 4 1.6500078989527518 3.62286878255714 5 0.8893299581283164 2.4408411504733247 6 0.5463417552609828 1.7993772857076178 7 0.3724437895270879 1.431084792736384 8 0.28055333106159147 1.2320036838497137 9 0.2146990039766447 1.0606671757179167 >10 1.1225082070117705 11.082832584411815 >50 0.07800288945467745 2.951958604699007 >100 0.05661190249329946 6.404271733448505 >500 0.006427352156339156 2.433920089252677 >1k 0.0027977885856999936 2.324798584543072 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 3872 0.1602670234042835 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.0695638352825866E-4 2 0.0 0.0 0.0 0.0 2.0695638352825866E-4 3 0.0 0.0 0.0 0.0 2.0695638352825866E-4 4 0.0 0.0 0.0 0.0 2.0695638352825866E-4 5 0.0 0.0 0.0 0.0 2.0695638352825866E-4 6 0.0 0.0 0.0 0.0 2.483476602339104E-4 7 0.0 0.0 0.0 4.139127670565173E-5 2.483476602339104E-4 8 0.0 0.0 0.0 4.139127670565173E-5 2.483476602339104E-4 9 0.0 0.0 0.0 4.139127670565173E-5 2.483476602339104E-4 10 0.0 0.0 0.0 1.241738301169552E-4 2.897389369395621E-4 11 0.0 0.0 0.0 1.241738301169552E-4 3.3113021364521383E-4 12 0.0 0.0 0.0 1.241738301169552E-4 7.450429807017311E-4 13 0.0 0.0 0.0 1.241738301169552E-4 9.519993642299898E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTACG 35 0.0021682158 16.28847 9 CCGATCA 65 3.3680735E-6 14.617857 9 GGTATCA 830 0.0 13.385228 1 CGATCAA 95 7.380913E-8 13.00166 10 GTATCAA 2335 0.0 12.891112 1 CCGATAA 155 1.8189894E-12 12.260138 9 ATAACGA 160 3.6379788E-12 11.87627 12 CGGAATT 80 2.8671933E-5 11.875286 15 CGCAAGA 515 0.0 11.803662 2 TAACGAA 155 2.5465852E-11 11.645682 13 TTAGAGT 235 0.0 11.318716 4 CGTCGTA 350 0.0 11.129992 10 TCTTATA 215 0.0 11.044487 2 TAGACTG 250 0.0 11.0204935 5 GATAACG 190 0.0 11.001861 11 ACTCTAA 330 0.0 10.94079 10 CGATAAC 165 8.0035534E-11 10.94079 10 CAAGACG 530 0.0 10.933545 4 AAGACGG 550 0.0 10.882305 5 CGCCGGT 405 0.0 10.791501 7 >>END_MODULE