##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062190_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2415968 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.294686022331422 32.0 32.0 32.0 32.0 32.0 2 31.459578520907563 32.0 32.0 32.0 32.0 32.0 3 31.581518049907945 32.0 32.0 32.0 32.0 32.0 4 31.657121700287423 32.0 32.0 32.0 32.0 32.0 5 31.630644942317115 32.0 32.0 32.0 32.0 32.0 6 35.28127483476602 36.0 36.0 36.0 36.0 36.0 7 35.28627862620697 36.0 36.0 36.0 36.0 36.0 8 35.23967246254917 36.0 36.0 36.0 36.0 36.0 9 35.3198966211473 36.0 36.0 36.0 36.0 36.0 10 35.202642584669995 36.0 36.0 36.0 36.0 36.0 11 35.323118518126066 36.0 36.0 36.0 36.0 36.0 12 35.24379834501119 36.0 36.0 36.0 36.0 36.0 13 35.278963959787546 36.0 36.0 36.0 36.0 36.0 14 35.2447933913032 36.0 36.0 36.0 36.0 36.0 15 35.2220041821746 36.0 36.0 36.0 36.0 36.0 16 35.23247741691943 36.0 36.0 36.0 36.0 36.0 17 35.21626362600829 36.0 36.0 36.0 36.0 36.0 18 35.21268948926476 36.0 36.0 36.0 36.0 36.0 19 35.20167444270785 36.0 36.0 36.0 36.0 36.0 20 35.20577880170598 36.0 36.0 36.0 36.0 36.0 21 35.20213057457715 36.0 36.0 36.0 36.0 36.0 22 35.182762354468274 36.0 36.0 36.0 36.0 36.0 23 35.150699429793775 36.0 36.0 36.0 36.0 36.0 24 35.133166084981255 36.0 36.0 36.0 36.0 36.0 25 35.118307444469465 36.0 36.0 36.0 36.0 36.0 26 35.07931975920211 36.0 36.0 36.0 36.0 36.0 27 35.065892015126025 36.0 36.0 36.0 36.0 36.0 28 35.04973989721718 36.0 36.0 36.0 36.0 36.0 29 35.03517058172956 36.0 36.0 36.0 36.0 36.0 30 35.00860193512497 36.0 36.0 36.0 36.0 36.0 31 35.01653581504391 36.0 36.0 36.0 36.0 36.0 32 34.99031361342534 36.0 36.0 36.0 36.0 36.0 33 34.96961921681082 36.0 36.0 36.0 36.0 36.0 34 34.95764596219818 36.0 36.0 36.0 36.0 36.0 35 34.94968600577491 36.0 36.0 36.0 36.0 36.0 36 34.9192075391727 36.0 36.0 36.0 36.0 36.0 37 34.91207830567292 36.0 36.0 36.0 36.0 36.0 38 34.90401362931959 36.0 36.0 36.0 32.0 36.0 39 34.88411642869442 36.0 36.0 36.0 32.0 36.0 40 34.87575249341051 36.0 36.0 36.0 32.0 36.0 41 34.85299184426284 36.0 36.0 36.0 32.0 36.0 42 34.820510039868076 36.0 36.0 36.0 32.0 36.0 43 34.81889122703612 36.0 36.0 36.0 32.0 36.0 44 34.777844739665426 36.0 36.0 36.0 32.0 36.0 45 34.76172945999285 36.0 36.0 36.0 32.0 36.0 46 34.744648521834726 36.0 36.0 36.0 32.0 36.0 47 34.72145657558378 36.0 36.0 36.0 32.0 36.0 48 34.7015556497437 36.0 36.0 36.0 32.0 36.0 49 34.68701654988808 36.0 36.0 36.0 32.0 36.0 50 34.284632495132385 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 9.0 20 18.0 21 52.0 22 183.0 23 470.0 24 1154.0 25 2596.0 26 5590.0 27 10198.0 28 17693.0 29 28627.0 30 42693.0 31 63610.0 32 97351.0 33 166430.0 34 384639.0 35 1594655.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.16133314232291 17.583985929267072 12.115346555560432 26.139334372849582 2 16.34508676717306 19.535746055294386 36.93550009458435 27.183667082948197 3 18.693878463320203 23.001189588246834 28.35429530762487 29.950636640808092 4 12.79156544770686 15.538995358794223 35.08106691854649 36.58837227495243 5 14.833079121593235 36.50081851351323 33.058715668480296 15.607386696413233 6 35.53996022293369 34.609607341165955 16.11285759520523 13.737574840695126 7 31.25095199936423 30.029992119100918 19.80146260215367 18.917593279381183 8 28.538623028119574 33.15408151101339 18.57284533569981 19.73445012516722 9 27.1546229089127 14.345637028305012 18.255995112518047 40.243744950264244 10 16.301843651773247 26.70174166358301 30.924234860921057 26.072179823722685 11 37.66241936979298 21.18239976688433 21.624293036993866 19.530887826328826 12 24.6279752049696 23.357552749043034 28.3366749890727 23.677797056914663 13 29.555855044437674 19.28527199035749 25.049007271619487 26.109865693585345 14 23.575105299407937 19.174674498999984 24.829385157419303 32.42083504417277 15 25.275251990092585 26.996094319130055 21.881870951933138 25.84678273884422 16 26.03374320609714 25.91350080071922 23.161626074679432 24.89112991850421 17 24.43335342189963 26.02493079378535 24.712868713492895 24.82884707082213 18 25.083393178295214 25.221847170799244 25.45628765317378 24.238471997731757 19 25.68054586883502 25.04419559058182 25.078467610250975 24.196790930332185 20 25.829877837280286 24.460110647618873 24.801465919523437 24.908545595577404 21 26.59521980423582 24.16679359991523 24.559141511808104 24.678845084040848 22 26.0311808765679 24.086204784169325 24.906248758261697 24.976365581001073 23 24.73261235248149 24.228797732420297 25.40464112107445 25.633948794023766 24 24.97940751594624 24.73287719428957 25.041040096360405 25.246675193403785 25 25.124774313503274 24.371533989359104 25.11715829967524 25.38653339746238 26 24.970208468286867 24.99363605696298 25.364586674834587 24.671568799915562 27 25.428826281946478 24.678812312315422 24.834113218168387 25.05824818756972 28 25.06147743702521 24.541014691255157 25.277750528058174 25.11975734366146 29 24.87772915642224 24.88799427802254 25.272812163175693 24.961464402379523 30 25.015014853425644 24.85764346066398 25.400247770951363 24.727093914959017 31 25.40729286012305 24.549742710120068 24.748008238574275 25.294956191182607 32 25.27163362635962 24.662180900337674 24.622237822328223 25.443947650974486 33 24.890861144580683 24.571112340896516 24.97496853216466 25.563057982358146 34 25.454853258188102 24.572879172696055 25.167387985814237 24.804879583301602 35 25.751325039890894 24.473367784715425 25.170563315279814 24.604743860113867 36 24.876819152634976 24.861049023990464 25.031747214357853 25.230384609016703 37 25.80821144400003 24.612559764992316 24.792698105608586 24.786530685399065 38 25.058610047815204 24.439603504682182 25.24006940489278 25.26171704260984 39 25.583229095352294 24.523106062801073 24.719136934352008 25.17452790749462 40 25.69166950197147 24.65850098883842 24.971377908463943 24.67845160072617 41 24.843746119522837 25.046896860021356 25.285685902795603 24.823671117660208 42 25.803266962549394 24.94004111230049 24.816687653312204 24.44000427183791 43 25.35016718780916 24.30419819806395 25.066829590959028 25.278805023167866 44 25.051472907492816 24.776867947052654 24.845167341795836 25.326491803658698 45 25.198289999693696 24.97444023070434 24.844592463448496 24.982677306153466 46 25.150461027489456 24.78765747702313 24.853305672235862 25.20857582325155 47 25.162007602850405 24.759182362446687 25.12351320564783 24.955296829055072 48 25.758526542013055 25.11474136831979 24.40265776110284 24.724074328564306 49 25.119552165226 25.172327725050508 24.55483297880575 25.153287130917747 50 25.166477919944903 25.258409163156642 24.551685143977323 25.023427772921135 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 108.0 1 106.5 2 105.0 3 242.0 4 379.0 5 392.5 6 406.0 7 318.5 8 231.0 9 337.5 10 444.0 11 762.5 12 1081.0 13 1994.5 14 2908.0 15 3700.5 16 4493.0 17 4366.5 18 4240.0 19 4116.0 20 3992.0 21 4897.5 22 5803.0 23 7095.5 24 8388.0 25 11032.0 26 13676.0 27 17031.5 28 20387.0 29 23807.0 30 27227.0 31 30983.0 32 34739.0 33 40409.0 34 46079.0 35 53646.5 36 61214.0 37 72110.0 38 83006.0 39 92309.0 40 101612.0 41 111472.0 42 121332.0 43 127505.0 44 133678.0 45 145187.0 46 156696.0 47 166803.5 48 176911.0 49 184336.0 50 191761.0 51 189000.0 52 186239.0 53 184562.5 54 182886.0 55 182501.0 56 182116.0 57 175249.0 58 168382.0 59 154640.0 60 140898.0 61 123690.0 62 106482.0 63 91826.0 64 77170.0 65 65131.0 66 53092.0 67 45988.5 68 38885.0 69 34353.5 70 29822.0 71 23529.0 72 17236.0 73 15073.5 74 12911.0 75 9728.0 76 6545.0 77 5704.0 78 4863.0 79 4154.0 80 3445.0 81 2676.5 82 1908.0 83 1533.5 84 1159.0 85 876.0 86 593.0 87 415.5 88 238.0 89 156.5 90 75.0 91 58.0 92 41.0 93 31.5 94 22.0 95 27.0 96 32.0 97 25.5 98 19.0 99 16.0 100 13.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.030712327315593584 2 0.005587822355262983 3 2.483476602339104E-4 4 4.1391276705651736E-5 5 1.241738301169552E-4 6 1.241738301169552E-4 7 0.0 8 0.0 9 0.0 10 8.278255341130347E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 6.208691505847759E-4 17 0.0 18 1.241738301169552E-4 19 1.241738301169552E-4 20 4.139127670565173E-4 21 0.0 22 0.0 23 0.0 24 0.0015728685148147657 25 2.483476602339104E-4 26 5.380865971734725E-4 27 5.380865971734725E-4 28 0.0016970423449317207 29 8.278255341130346E-4 30 0.0011175644710525966 31 6.622604272904278E-4 32 0.0012417383011695518 33 3.725214903508656E-4 34 9.933906409356416E-4 35 1.241738301169552E-4 36 3.311302136452139E-4 37 0.0019453900051656316 38 0.0 39 9.106080875243381E-4 40 8.278255341130347E-5 41 0.0011589557477582485 42 0.0060431263990251526 43 0.005049735758089511 44 0.005546431078557332 45 0.002566259155750407 46 0.0024834766023391036 47 0.0013245208545808556 48 0.004139127670565173 49 0.003187128306335183 50 0.0013245208545808556 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2415968.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.74227846001551 #Duplication Level Percentage of deduplicated Percentage of total 1 77.78822228144212 43.3609274732173 2 13.17109796581994 14.683740208697579 3 3.843096295669826 6.426688315856446 4 1.6693909777498857 3.7222262696148674 5 0.8876155971033806 2.4738857889594787 6 0.5377973365138811 1.7986829332206855 7 0.37744428042177414 1.4727722927687499 8 0.2810389813931167 1.2532602527147385 9 0.21152046552962972 1.061156942059026 >10 1.0974984965570183 10.882446485212345 >50 0.0766113291586445 2.94655654053005 >100 0.05007875061878945 5.6508120263906605 >500 0.00619774858979103 2.3562338484119474 >1k 0.0023894934322076715 1.910610622346194 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.139127670565173E-5 2 0.0 0.0 0.0 0.0 4.139127670565173E-5 3 0.0 0.0 0.0 0.0 4.139127670565173E-5 4 0.0 0.0 0.0 0.0 4.139127670565173E-5 5 0.0 0.0 0.0 0.0 4.139127670565173E-5 6 0.0 0.0 0.0 0.0 8.278255341130346E-5 7 0.0 0.0 0.0 0.0 8.278255341130346E-5 8 0.0 0.0 0.0 0.0 8.278255341130346E-5 9 0.0 0.0 0.0 0.0 8.278255341130346E-5 10 0.0 0.0 0.0 4.139127670565173E-5 1.241738301169552E-4 11 0.0 0.0 0.0 4.139127670565173E-5 1.241738301169552E-4 12 0.0 0.0 0.0 4.139127670565173E-5 4.139127670565173E-4 13 0.0 0.0 0.0 4.139127670565173E-5 4.966953204678208E-4 14 0.0 0.0 0.0 4.139127670565173E-5 4.966953204678208E-4 15 0.0 0.0 0.0 1.241738301169552E-4 6.622604272904277E-4 16 0.0 0.0 0.0 2.0695638352825866E-4 6.622604272904277E-4 17 0.0 0.0 0.0 2.483476602339104E-4 6.622604272904277E-4 18 0.0 0.0 0.0 3.7252149035086555E-4 7.036517039960794E-4 19 0.0 0.0 0.0 4.5530404376216904E-4 7.036517039960794E-4 20 0.0 4.139127670565173E-5 0.0 7.036517039960794E-4 7.450429807017311E-4 21 0.0 4.139127670565173E-5 0.0 7.864342574073829E-4 8.692168108186863E-4 22 0.0 4.139127670565173E-5 0.0 8.692168108186863E-4 9.933906409356416E-4 23 0.0 4.139127670565173E-5 0.0 0.0011589557477582485 0.001076173194346945 24 0.0 4.139127670565173E-5 0.0 0.001365912131286507 0.001076173194346945 25 0.0 4.139127670565173E-5 0.0 0.0018212161750486761 0.0011589557477582485 26 0.0 4.139127670565173E-5 0.0 0.002442085325633452 0.0014900859614034622 27 4.139127670565173E-5 4.139127670565173E-5 0.0 0.002855998092689969 0.0014900859614034622 28 4.139127670565173E-5 4.139127670565173E-5 0.0 0.0038079974569199594 0.0014900859614034622 29 4.139127670565173E-5 4.139127670565173E-5 0.0 0.005380865971734725 0.0014900859614034622 30 4.139127670565173E-5 4.139127670565173E-5 0.0 0.007947125127485133 0.0014900859614034622 31 4.139127670565173E-5 4.139127670565173E-5 0.0 0.012251817904872913 0.0014900859614034622 32 4.139127670565173E-5 4.139127670565173E-5 0.0 0.016225380468615477 0.0016142597915204174 33 4.139127670565173E-5 4.139127670565173E-5 0.0 0.020488681969297606 0.0016142597915204174 34 4.139127670565173E-5 4.139127670565173E-5 0.0 0.026407634538205806 0.0018626074517543278 35 4.139127670565173E-5 4.139127670565173E-5 0.0 0.03187128306335183 0.0018626074517543278 36 4.139127670565173E-5 4.139127670565173E-5 0.0 0.04023232095789348 0.0018626074517543278 37 4.139127670565173E-5 8.278255341130346E-5 0.0 0.05244274758606074 0.0018626074517543278 38 4.139127670565173E-5 8.278255341130346E-5 0.0 0.06866812805467622 0.0019039987284599797 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2715 0.0 27.314064 1 GGTATCA 1200 0.0 25.122658 1 TCAACGC 3850 0.0 18.970064 4 CAACGCA 3955 0.0 18.522055 5 ATCAACG 3955 0.0 18.466433 3 AACGCAG 4095 0.0 17.835102 6 TATCAAC 4135 0.0 17.716507 2 CGTCGTA 585 0.0 17.674307 10 GTATACG 90 2.2124898E-4 17.115192 1 ACCGTCG 640 0.0 16.842537 8 AACGCGA 80 0.0019895309 16.499496 13 TATACTG 365 0.0 16.272802 5 ATACCGT 680 0.0 16.175306 6 CCGTCGT 660 0.0 15.998849 9 TACCGTC 650 0.0 15.906548 7 GTAATAC 280 0.0 15.713154 3 GCGAAAG 830 0.0 15.6384 18 CGTCTTA 275 0.0 15.199534 15 AAGACGG 960 0.0 15.123911 5 CGAGCCG 780 0.0 14.948262 15 >>END_MODULE