##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062186_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 952866 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.273148585425442 32.0 32.0 32.0 32.0 32.0 2 31.45174032865062 32.0 32.0 32.0 32.0 32.0 3 31.57900376338331 32.0 32.0 32.0 32.0 32.0 4 31.655689257461177 32.0 32.0 32.0 32.0 32.0 5 31.623913540833655 32.0 32.0 32.0 32.0 32.0 6 35.27672411440853 36.0 36.0 36.0 36.0 36.0 7 35.284101856924266 36.0 36.0 36.0 36.0 36.0 8 35.22714316598557 36.0 36.0 36.0 36.0 36.0 9 35.32408124542171 36.0 36.0 36.0 36.0 36.0 10 35.19787462245478 36.0 36.0 36.0 36.0 36.0 11 35.32018667892442 36.0 36.0 36.0 36.0 36.0 12 35.23839448568844 36.0 36.0 36.0 36.0 36.0 13 35.276572991375495 36.0 36.0 36.0 36.0 36.0 14 35.240823998337646 36.0 36.0 36.0 36.0 36.0 15 35.21569244783632 36.0 36.0 36.0 36.0 36.0 16 35.2282681930093 36.0 36.0 36.0 36.0 36.0 17 35.20549059364066 36.0 36.0 36.0 36.0 36.0 18 35.208900307073606 36.0 36.0 36.0 36.0 36.0 19 35.19809605967681 36.0 36.0 36.0 36.0 36.0 20 35.19610207521309 36.0 36.0 36.0 36.0 36.0 21 35.19689861953307 36.0 36.0 36.0 36.0 36.0 22 35.17220889401028 36.0 36.0 36.0 36.0 36.0 23 35.149568774623084 36.0 36.0 36.0 36.0 36.0 24 35.1321938236856 36.0 36.0 36.0 36.0 36.0 25 35.11806591902744 36.0 36.0 36.0 36.0 36.0 26 35.08850877248217 36.0 36.0 36.0 36.0 36.0 27 35.06952918878415 36.0 36.0 36.0 36.0 36.0 28 35.04332298560343 36.0 36.0 36.0 36.0 36.0 29 35.03101485413479 36.0 36.0 36.0 36.0 36.0 30 35.015507951800146 36.0 36.0 36.0 36.0 36.0 31 35.01190618617938 36.0 36.0 36.0 36.0 36.0 32 34.99128313949706 36.0 36.0 36.0 36.0 36.0 33 34.96229795165322 36.0 36.0 36.0 36.0 36.0 34 34.95461796307141 36.0 36.0 36.0 36.0 36.0 35 34.941171161527436 36.0 36.0 36.0 36.0 36.0 36 34.92088709220394 36.0 36.0 36.0 36.0 36.0 37 34.911619262309706 36.0 36.0 36.0 36.0 36.0 38 34.899174700325126 36.0 36.0 36.0 36.0 36.0 39 34.88605113415738 36.0 36.0 36.0 32.0 36.0 40 34.870023696931156 36.0 36.0 36.0 32.0 36.0 41 34.84094510665718 36.0 36.0 36.0 32.0 36.0 42 34.81579466577672 36.0 36.0 36.0 32.0 36.0 43 34.797521372365054 36.0 36.0 36.0 32.0 36.0 44 34.760187686411314 36.0 36.0 36.0 32.0 36.0 45 34.74541121206969 36.0 36.0 36.0 32.0 36.0 46 34.73166216445964 36.0 36.0 36.0 32.0 36.0 47 34.69864597960259 36.0 36.0 36.0 32.0 36.0 48 34.67171564522189 36.0 36.0 36.0 32.0 36.0 49 34.65641863598869 36.0 36.0 36.0 32.0 36.0 50 34.254325372088 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 2.0 20 4.0 21 27.0 22 64.0 23 185.0 24 441.0 25 1058.0 26 2189.0 27 4102.0 28 7060.0 29 10947.0 30 17031.0 31 25251.0 32 38696.0 33 66662.0 34 153726.0 35 625419.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.52392310341063 18.328343229555973 12.442260370037541 25.705473296995862 2 16.408787652032824 19.45757773889973 37.297670010715365 26.83596459835208 3 18.998953679595072 22.451915962735463 28.39736667285853 30.151763684810934 4 12.968979898537675 15.726870304953689 34.51786505132936 36.78628474517928 5 14.963069308801028 36.27404063110658 32.847850589694666 15.915039470397726 6 35.66609260722685 34.11550243844078 16.10882151998766 14.109583434344705 7 31.530981271238556 29.760532960563186 19.287391931289395 19.421093836908863 8 28.50211887085907 33.46336210967754 18.317580856070002 19.716938163393383 9 26.518734008769336 14.995917579176925 19.035310316455828 39.45003809559791 10 17.44687594452094 26.513437384558554 29.90384776841186 26.135838902508645 11 37.143417857285286 21.603982091920585 21.26689377100243 19.9857062797917 12 24.407629194451268 23.764831571280748 27.905917516208994 23.92162171805899 13 29.597341074190915 19.15389991877137 25.109721618779556 26.139037388258163 14 23.620110277835497 19.32874087227375 24.84976901264186 32.201379837248886 15 25.36421700427972 26.850050269397798 21.836228808667745 25.949503917654738 16 25.9861112714473 25.94203339633671 23.198395565345976 24.87345976687002 17 24.221978746224547 26.292784085065474 24.73233382238426 24.752903346325716 18 24.983523356953352 25.084272257111195 25.57038570037277 24.36181868556268 19 25.655548629083206 25.08379982075129 25.1674422216765 24.093209328489003 20 25.80197614562399 24.43578051455348 24.93186338043689 24.830379959385642 21 26.53321663276893 24.23362781335466 24.715752267370227 24.51740328650618 22 25.982876920784243 24.083659192373325 25.1481320563437 24.785331830498727 23 24.63221481299574 24.221768853123105 25.65754261354692 25.48847372033423 24 24.756916276350903 24.788295459673552 25.313975490653934 25.140812773321606 25 25.039459985895153 24.29328844410115 25.31987775800114 25.347373812002555 26 24.779427892572176 25.207716114488655 25.490023224744796 24.522832768194377 27 25.204882548697977 24.759697878918587 25.155452567682868 24.87996700470057 28 25.039198030338333 24.621610446091427 25.43621583159645 24.902975691973797 29 24.731021425932767 24.967046713906708 25.519906303522855 24.782025556637674 30 24.737972774565804 24.921210798239823 25.475437604094626 24.865378823099746 31 25.110928736944622 24.777302951942776 24.99160425832018 25.120164052792425 32 25.236733430234082 24.672855021435357 24.796482187927985 25.293929360402572 33 24.839694143772576 24.618571761401917 25.143199568459785 25.398534526365722 34 25.28897275354775 24.662436585514317 25.383425442196007 24.665165218741933 35 25.729799845518354 24.490378480034927 25.298258723175604 24.481562951271115 36 24.618544323790516 24.92341501349092 25.22492740299497 25.233113259723588 37 25.539774844125684 24.784882421280976 25.06540896740414 24.609933767189204 38 24.902557127654884 24.37425619132176 25.36715550769993 25.35603117332343 39 25.41813636645086 24.645094394868497 24.896128388355464 25.04064085032518 40 25.498995135722268 24.69122068708579 25.08057279887497 24.729211378316972 41 24.537127408816044 25.247729452780803 25.470218942251382 24.74492419615177 42 25.657737308094358 24.876575861764966 25.132659958102966 24.333026872037717 43 25.305196740649937 24.30533107759218 25.18250933012044 25.206962851637442 44 24.87447839265174 24.85842086261471 25.126466167938677 25.140634576794874 45 24.95287791075979 25.03862122236169 25.026132294478426 24.982368572400098 46 25.02749663113794 24.842891386208027 25.01259387685707 25.117018105796962 47 25.087342775133674 24.755812794181697 25.302695583273426 24.8541488474112 48 25.568203285377844 25.371525605880603 24.368301519266854 24.6919695894747 49 24.966074852571225 25.33413515274975 24.62740060430317 25.07238939037586 50 24.981424187596815 25.46051223065072 24.771213157972067 24.7868504237804 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 153.0 1 96.5 2 40.0 3 85.5 4 131.0 5 142.5 6 154.0 7 125.5 8 97.0 9 133.5 10 170.0 11 302.5 12 435.0 13 870.0 14 1305.0 15 1540.5 16 1776.0 17 1878.5 18 1981.0 19 1873.0 20 1765.0 21 2033.5 22 2302.0 23 2823.5 24 3345.0 25 4293.0 26 5241.0 27 6529.5 28 7818.0 29 9304.0 30 10790.0 31 12218.0 32 13646.0 33 15969.5 34 18293.0 35 20976.5 36 23660.0 37 27858.0 38 32056.0 39 36118.5 40 40181.0 41 43896.5 42 47612.0 43 50848.5 44 54085.0 45 58812.5 46 63540.0 47 67721.0 48 71902.0 49 74209.5 50 76517.0 51 75480.0 52 74443.0 53 73610.0 54 72777.0 55 72417.5 56 72058.0 57 68908.5 58 65759.0 59 60457.5 60 55156.0 61 47990.5 62 40825.0 63 35195.0 64 29565.0 65 24863.0 66 20161.0 67 17302.0 68 14443.0 69 12718.5 70 10994.0 71 8609.5 72 6225.0 73 5447.5 74 4670.0 75 3486.5 76 2303.0 77 1998.0 78 1693.0 79 1454.5 80 1216.0 81 946.0 82 676.0 83 553.0 84 430.0 85 347.0 86 264.0 87 188.5 88 113.0 89 76.5 90 40.0 91 32.5 92 25.0 93 19.0 94 13.0 95 12.5 96 12.0 97 8.5 98 5.0 99 5.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.032953216926619275 2 0.0030434499709298055 3 3.1483965216515226E-4 4 0.0 5 0.0 6 3.1483965216515226E-4 7 0.0 8 0.0 9 0.0 10 2.0989310144343487E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 7.34625855052022E-4 17 0.0 18 2.0989310144343487E-4 19 0.0 20 1.0494655072171744E-4 21 0.0 22 0.0 23 0.0 24 5.247327536085872E-4 25 2.0989310144343487E-4 26 3.1483965216515226E-4 27 3.1483965216515226E-4 28 0.001259358608660609 29 2.0989310144343487E-4 30 7.34625855052022E-4 31 2.0989310144343487E-4 32 1.0494655072171744E-4 33 0.0 34 8.395724057737395E-4 35 2.0989310144343487E-4 36 3.1483965216515226E-4 37 0.0015741982608257616 38 0.0 39 7.34625855052022E-4 40 1.0494655072171744E-4 41 0.001259358608660609 42 0.005667113738972741 43 0.003987968927425263 44 0.004407755130312132 45 0.002308824115877783 46 0.002308824115877783 47 0.0011544120579388916 48 0.003987968927425263 49 0.003463236173816675 50 0.001469251710104044 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 952866.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.07102633235388 #Duplication Level Percentage of deduplicated Percentage of total 1 79.97645850254882 49.642208616801156 2 12.640712408699867 15.69243985560244 3 3.4062867814486775 6.3429514952054955 4 1.3500347946024327 3.3519218114144635 5 0.7265024114305008 2.2547375155210605 6 0.40487021241327426 1.5078425769534034 7 0.28281897523664906 1.228840484144237 8 0.19589201323426522 0.9727374649409515 9 0.14399062687815967 0.8043881393309754 >10 0.7610772583286972 8.583727686501788 >50 0.062494347330872155 2.6899970880848696 >100 0.0454566737843309 5.493447769497611 >500 0.0034049940634380106 1.4347594960015606 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 972 0.10200804730150935 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 1.0494655072171742E-4 13 0.0 0.0 0.0 0.0 1.0494655072171742E-4 14 0.0 0.0 0.0 0.0 2.0989310144343485E-4 15 0.0 0.0 0.0 0.0 2.0989310144343485E-4 16 0.0 0.0 0.0 0.0 2.0989310144343485E-4 17 0.0 0.0 0.0 1.0494655072171742E-4 2.0989310144343485E-4 18 0.0 0.0 0.0 2.0989310144343485E-4 3.148396521651523E-4 19 0.0 0.0 0.0 3.148396521651523E-4 3.148396521651523E-4 20 0.0 0.0 0.0 5.247327536085872E-4 4.197862028868697E-4 21 0.0 0.0 0.0 6.296793043303046E-4 4.197862028868697E-4 22 0.0 0.0 0.0 7.34625855052022E-4 5.247327536085872E-4 23 0.0 0.0 0.0 0.0015741982608257613 5.247327536085872E-4 24 0.0 0.0 0.0 0.0026236637680429357 5.247327536085872E-4 25 0.0 0.0 0.0 0.0031483965216515227 5.247327536085872E-4 26 0.0 0.0 0.0 0.003883022376703545 6.296793043303046E-4 27 0.0 0.0 0.0 0.004512701681033849 7.34625855052022E-4 28 0.0 0.0 0.0 0.005457220637529307 7.34625855052022E-4 29 0.0 0.0 0.0 0.006821525796911633 7.34625855052022E-4 30 0.0 0.0 0.0 0.010389708521450025 7.34625855052022E-4 31 0.0 0.0 0.0 0.014797463651762157 8.395724057737394E-4 32 0.0 0.0 0.0 0.02256350840516925 8.395724057737394E-4 33 0.0 0.0 0.0 0.027495996289089965 8.395724057737394E-4 34 0.0 0.0 0.0 0.034002682433836445 9.445189564954568E-4 35 0.0 0.0 0.0 0.039879689274252623 9.445189564954568E-4 36 0.0 0.0 0.0 0.048380359882711735 9.445189564954568E-4 37 0.0 0.0 0.0 0.06107889252003954 0.0010494655072171744 38 0.0 0.0 0.0 0.07629614237468857 0.0010494655072171744 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATGCCG 30 0.0057459846 29.331688 5 GTATCAA 1225 0.0 24.971037 1 GGTATCA 625 0.0 23.94345 1 ATAATAC 80 8.989895E-5 19.24892 3 CGCAATA 150 4.656613E-10 19.066599 36 CGAATGC 175 9.094947E-12 18.861032 43 GTACGGG 60 0.0073976824 18.339043 1 AACGAGT 60 0.0074021635 18.337116 44 CTATGCG 60 0.007413376 18.332306 9 GTCCTAA 145 6.2773324E-9 18.212566 1 TTAAGAC 140 8.371899E-8 17.284744 3 TAGGGCG 80 0.0019886794 16.499075 31 CCTAGAC 175 3.623427E-9 16.34194 3 TAGCGGC 175 3.623427E-9 16.34194 30 TCTAGCG 175 3.623427E-9 16.34194 28 CCAGTAC 190 6.166374E-10 16.209618 3 GGCGTTA 330 0.0 16.002462 42 AAGACGG 430 0.0 15.859576 5 AGAGCGA 405 0.0 15.752204 15 TCCGACC 350 0.0 15.713405 8 >>END_MODULE