Basic Statistics
Measure | Value |
---|---|
Filename | SRR4062185_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1493855 |
Sequences flagged as poor quality | 0 |
Sequence length | 25 |
%GC | 49 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTT | 3377 | 0.22605942343801774 | No Hit |
TATCAACGCAGAGTACTTTTTTTTT | 2153 | 0.14412376033818544 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AGTTTCG | 50 | 0.0014994184 | 13.300095 | 16 |
GTAATAC | 105 | 1.9967047E-8 | 12.665058 | 3 |
AACCGCT | 75 | 2.0716383E-4 | 11.401226 | 7 |
GGTATCA | 640 | 0.0 | 11.276794 | 1 |
GTCCTAC | 195 | 0.0 | 11.200704 | 1 |
TCTTATA | 145 | 1.2223609E-9 | 11.134651 | 2 |
GTATCAA | 1495 | 0.0 | 10.98897 | 1 |
CGTCTAT | 70 | 0.0014962641 | 10.852856 | 1 |
TAATACT | 190 | 9.094947E-12 | 10.500073 | 4 |
ACCGGCC | 100 | 2.3953493E-5 | 10.451125 | 8 |
AGAACCG | 100 | 2.397122E-5 | 10.450424 | 5 |
GTATAAG | 200 | 1.8189894E-12 | 10.445873 | 1 |
GTCTTAG | 230 | 0.0 | 10.322008 | 1 |
TAAGGTT | 120 | 1.5222777E-6 | 10.292085 | 5 |
GTGTAAT | 205 | 3.6379788E-12 | 10.191095 | 1 |
TAGGGCC | 75 | 0.0026473112 | 10.133404 | 4 |
GTAGACC | 320 | 0.0 | 10.092467 | 3 |
GTAATTC | 105 | 4.1096413E-5 | 9.951117 | 3 |
CTTATAC | 115 | 1.0276006E-5 | 9.911785 | 3 |
TAAGGTG | 180 | 4.1745807E-9 | 9.500386 | 5 |