##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062184_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2057204 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.331676877937237 32.0 32.0 32.0 32.0 32.0 2 31.50496013035168 32.0 32.0 32.0 32.0 32.0 3 31.60501340654597 32.0 32.0 32.0 32.0 32.0 4 31.673250683938004 32.0 32.0 32.0 32.0 32.0 5 31.645626782759514 32.0 32.0 32.0 32.0 32.0 6 35.30625791122319 36.0 36.0 36.0 36.0 36.0 7 35.30574702363013 36.0 36.0 36.0 36.0 36.0 8 35.26525662987239 36.0 36.0 36.0 36.0 36.0 9 35.33286295379554 36.0 36.0 36.0 36.0 36.0 10 35.22381640323468 36.0 36.0 36.0 36.0 36.0 11 35.33799370407602 36.0 36.0 36.0 36.0 36.0 12 35.26019393312477 36.0 36.0 36.0 36.0 36.0 13 35.29479915458068 36.0 36.0 36.0 36.0 36.0 14 35.25325441716038 36.0 36.0 36.0 36.0 36.0 15 35.23575396509048 36.0 36.0 36.0 36.0 36.0 16 35.24443030443262 36.0 36.0 36.0 36.0 36.0 17 35.22621140149445 36.0 36.0 36.0 36.0 36.0 18 35.22255935726355 36.0 36.0 36.0 36.0 36.0 19 35.21481729570816 36.0 36.0 36.0 36.0 36.0 20 35.215893513720566 36.0 36.0 36.0 36.0 36.0 21 35.20722592411837 36.0 36.0 36.0 36.0 36.0 22 35.19473178158316 36.0 36.0 36.0 36.0 36.0 23 35.16765328086082 36.0 36.0 36.0 36.0 36.0 24 35.14861384675511 36.0 36.0 36.0 36.0 36.0 25 35.13085624955036 36.0 36.0 36.0 36.0 36.0 26 35.091881019091936 36.0 36.0 36.0 36.0 36.0 27 35.08343411737484 36.0 36.0 36.0 36.0 36.0 28 35.06344679477582 36.0 36.0 36.0 36.0 36.0 29 35.04176591140208 36.0 36.0 36.0 36.0 36.0 30 35.027675913521456 36.0 36.0 36.0 36.0 36.0 31 35.026770315437844 36.0 36.0 36.0 36.0 36.0 32 35.006063083680566 36.0 36.0 36.0 36.0 36.0 33 34.984379769823505 36.0 36.0 36.0 36.0 36.0 34 34.96787095494662 36.0 36.0 36.0 36.0 36.0 35 34.9608881763792 36.0 36.0 36.0 36.0 36.0 36 34.939716236211865 36.0 36.0 36.0 36.0 36.0 37 34.92987326487796 36.0 36.0 36.0 36.0 36.0 38 34.911676236289644 36.0 36.0 36.0 36.0 36.0 39 34.90329690200875 36.0 36.0 36.0 32.0 36.0 40 34.88841408047038 36.0 36.0 36.0 32.0 36.0 41 34.85900134357118 36.0 36.0 36.0 32.0 36.0 42 34.82461389342039 36.0 36.0 36.0 32.0 36.0 43 34.82392898322189 36.0 36.0 36.0 32.0 36.0 44 34.78421391364201 36.0 36.0 36.0 32.0 36.0 45 34.77387804029158 36.0 36.0 36.0 32.0 36.0 46 34.75480214893613 36.0 36.0 36.0 32.0 36.0 47 34.732130600562705 36.0 36.0 36.0 32.0 36.0 48 34.699377893490386 36.0 36.0 36.0 32.0 36.0 49 34.69389277874241 36.0 36.0 36.0 32.0 36.0 50 34.29327281105812 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 0.0 19 8.0 20 16.0 21 44.0 22 161.0 23 412.0 24 973.0 25 2153.0 26 4853.0 27 8889.0 28 15021.0 29 24053.0 30 36353.0 31 53135.0 32 80832.0 33 136856.0 34 318735.0 35 1374709.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.98240132106794 17.778643318463537 12.27390180878553 25.965053551682992 2 16.58294144354794 19.424721674802615 36.70217575394021 27.29016112770924 3 18.911557813860316 22.675125425518313 28.02604709223278 30.38726966838859 4 13.039597939532463 15.580620872125891 34.28052554852389 37.099255639817756 5 15.330176297537824 35.92414753228168 32.42809172060719 16.317584449573307 6 35.816286303574614 34.115771866725716 16.04495622936213 14.022985600337545 7 31.732827663177787 29.55307300588566 19.392340283219358 19.321759047717194 8 28.928195745293127 32.333400090608414 18.441632429258352 20.296771734840103 9 27.057890223818347 14.524033591223818 18.50915125578212 39.90892492917572 10 17.427205774053412 25.929769692149975 29.57739221651923 27.065632317277387 11 37.628548262593306 21.08682464160093 21.34324063145901 19.941386464346756 12 25.013659316236993 23.319029128856446 27.538688433427115 24.128623121479446 13 29.453277360922886 19.008226699928642 24.947452950703966 26.591042988444507 14 24.139317248070682 19.281315805335787 24.2059124909343 32.373454455659235 15 25.698861172737363 26.581029397181805 21.571803282513546 26.14830614756728 16 26.58067558174014 25.51329726471546 22.711660080012056 25.19436707353234 17 24.646316067827982 25.84896782234528 24.227592402114713 25.27712370771202 18 25.49518667084062 24.616178074707225 25.266137923122837 24.622497331329317 19 26.150688021217146 24.609810208418807 24.67139865565107 24.56810311471298 20 26.476757406815988 23.778469010928973 24.200111511170803 25.54466207108424 21 27.397711745230534 23.700503742706715 24.004363210012052 24.8974213020507 22 26.71110886426431 23.603930383180277 24.598727204496978 25.086233548058434 23 25.04581465505089 23.826196941282383 25.144297934767707 25.983690468899017 24 25.167984732505307 24.5048442504573 24.842150496237327 25.485020520800067 25 25.52172856309547 23.87944779311686 24.754472097997276 25.844351545790396 26 25.151091950139776 25.002150991327493 25.01449792459718 24.832259133935548 27 25.796812749003983 24.174653265901743 24.602614432460495 25.42591955263378 28 25.291711145203223 24.091762866692722 25.16036578370695 25.456160204397104 29 25.124307613036194 24.403617547194116 25.133154611011594 25.338920228758088 30 25.08613750111804 24.527799274345025 25.29545357324799 25.090609651288954 31 25.77922851261062 24.15225586295903 24.315147567440132 25.753368056990222 32 25.63738984308123 24.213255142114516 24.096687745694467 26.052667269109786 33 25.161773598626482 24.024448812850114 24.73629153469091 26.077486053832498 34 25.942791810957484 24.13945638415157 24.747713869612305 25.170037935278643 35 26.209983778899154 23.847886225772253 25.039604860399855 24.90252513492874 36 24.984226147942692 24.633944551871913 24.495261039022907 25.88656826116249 37 26.09670602955595 24.24101307467542 24.54016001493304 25.122120880835592 38 25.27109610908787 23.912067058006887 24.86107357364656 25.955763259258685 39 26.06131164036467 24.01036362619975 24.259392036243526 25.668932697192048 40 25.998953918963718 24.25046252142473 24.67531141813006 25.075272141481484 41 25.07414265041078 24.8240433641538 25.04726123052738 25.05455275490805 42 26.40977914193338 24.555724454611877 24.426368410485956 24.608127992968786 43 25.893300290357534 23.792303702410994 24.51399262755339 25.800403379678084 44 25.23483153331878 24.443188099049493 24.428458718602236 25.893521649029488 45 25.469602355862385 24.537203123131533 24.508279837407386 25.484914683598696 46 25.401888621314217 24.48236940017364 24.399050731055695 25.716691247456446 47 25.437249049669937 24.33856055376778 24.970590808777064 25.25359958778522 48 26.167129854908733 24.903420754949032 23.817338714969818 25.11211067517241 49 25.375657774807074 24.94306374187276 24.024402989609285 25.656875493710885 50 25.64907003491197 25.01125330185974 24.167863292069605 25.171813371158684 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 56.0 1 60.5 2 65.0 3 175.5 4 286.0 5 279.0 6 272.0 7 219.0 8 166.0 9 243.0 10 320.0 11 578.5 12 837.0 13 1523.5 14 2210.0 15 2897.5 16 3585.0 17 3512.0 18 3439.0 19 3291.5 20 3144.0 21 3630.5 22 4117.0 23 4839.5 24 5562.0 25 7199.5 26 8837.0 27 11306.0 28 13775.0 29 16204.5 30 18634.0 31 21804.0 32 24974.0 33 28754.0 34 32534.0 35 38283.5 36 44033.0 37 53819.5 38 63606.0 39 72116.0 40 80626.0 41 89031.0 42 97436.0 43 102359.5 44 107283.0 45 119225.0 46 131167.0 47 141405.0 48 151643.0 49 159068.5 50 166494.0 51 163160.0 52 159826.0 53 160248.5 54 160671.0 55 162403.0 56 164135.0 57 158350.0 58 152565.0 59 141368.0 60 130171.0 61 114514.0 62 98857.0 63 84947.5 64 71038.0 65 60432.5 66 49827.0 67 42591.0 68 35355.0 69 31417.5 70 27480.0 71 21233.0 72 14986.0 73 13173.5 74 11361.0 75 8273.5 76 5186.0 77 4612.5 78 4039.0 79 3412.0 80 2785.0 81 2194.0 82 1603.0 83 1377.5 84 1152.0 85 897.0 86 642.0 87 431.5 88 221.0 89 151.0 90 81.0 91 58.5 92 36.0 93 32.0 94 28.0 95 24.0 96 20.0 97 25.0 98 30.0 99 19.0 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03334623109813125 2 0.003791553973256906 3 3.4026766426664543E-4 4 4.860966632380649E-5 5 0.0 6 1.4582899897141945E-4 7 0.0 8 0.0 9 0.0 10 4.860966632380649E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 6.805353285332909E-4 17 0.0 18 0.0 19 0.0 20 5.347063295618714E-4 21 1.4582899897141945E-4 22 0.0 23 9.721933264761298E-5 24 0.0011180223254475493 25 1.9443866529522596E-4 26 6.319256622094844E-4 27 3.888773305904519E-4 28 0.0015555093223618077 29 4.3748699691425834E-4 30 0.0013610706570665817 31 4.3748699691425834E-4 32 0.0012152416580951623 33 3.888773305904519E-4 34 7.777546611809038E-4 35 3.4026766426664543E-4 36 9.721933264761298E-5 37 0.0010208029927999361 38 0.0 39 4.3748699691425834E-4 40 9.721933264761298E-5 41 0.0010208029927999361 42 0.004423479635466391 43 0.004131821637523551 44 0.004423479635466391 45 0.0018471673203046466 46 0.0020416059855998723 47 0.0011666319917713556 48 0.004131821637523551 49 0.0038401636395807128 50 0.0014582899897141945 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2057204.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.38478278595695 #Duplication Level Percentage of deduplicated Percentage of total 1 72.7126791976382 35.18187188762695 2 15.090549458742498 14.603059153639919 3 5.171671052176968 7.50690541500012 4 2.2841963389107782 4.4208137479470455 5 1.2442132982699803 3.0100495088096033 6 0.7644528146245672 2.219273003143386 7 0.5072037399569607 1.7178659950229773 8 0.36793143291647257 1.4241825969431532 9 0.2690006891072743 1.1713985920555383 >10 1.4160148145709146 12.124739307896656 >50 0.08792236229309065 2.920038981785321 >100 0.06970122298375434 7.041213667475314 >500 0.010013246175204424 3.343217005353522 >1k 0.0044503316334241864 3.3153711373004415 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2673 0.12993363808353472 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 2473 0.12021170481877344 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2344 0.1139410578630024 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 2307 0.11214250020902157 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 2288 0.11121891654886924 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 2233 0.10854538490105989 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 2230 0.10839955590208847 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA 2186 0.10626073058384099 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.4582899897141945E-4 2 0.0 0.0 0.0 0.0 1.4582899897141945E-4 3 0.0 0.0 0.0 0.0 1.4582899897141945E-4 4 0.0 0.0 0.0 0.0 1.4582899897141945E-4 5 0.0 0.0 0.0 0.0 1.9443866529522596E-4 6 0.0 0.0 0.0 0.0 1.9443866529522596E-4 7 0.0 0.0 0.0 0.0 1.9443866529522596E-4 8 0.0 0.0 0.0 0.0 1.9443866529522596E-4 9 0.0 0.0 0.0 0.0 1.9443866529522596E-4 10 0.0 0.0 0.0 0.0 1.9443866529522596E-4 11 0.0 0.0 0.0 0.0 1.9443866529522596E-4 12 0.0 0.0 0.0 0.0 3.4026766426664543E-4 13 0.0 0.0 0.0 0.0 4.374869969142584E-4 14 0.0 0.0 0.0 0.0 4.860966632380649E-4 15 0.0 0.0 0.0 1.4582899897141945E-4 5.833159958856778E-4 16 0.0 0.0 0.0 1.4582899897141945E-4 6.319256622094844E-4 17 0.0 0.0 0.0 1.9443866529522596E-4 6.805353285332909E-4 18 0.0 0.0 0.0 1.9443866529522596E-4 6.805353285332909E-4 19 0.0 0.0 0.0 2.4304833161903244E-4 6.805353285332909E-4 20 0.0 0.0 0.0 3.888773305904519E-4 7.777546611809038E-4 21 0.0 0.0 0.0 4.860966632380649E-4 8.749739938285168E-4 22 0.0 0.0 0.0 7.777546611809038E-4 9.235836601523233E-4 23 0.0 0.0 0.0 9.721933264761298E-4 9.721933264761298E-4 24 0.0 0.0 0.0 0.0011666319917713556 9.721933264761298E-4 25 0.0 0.0 0.0 0.0015068996560380012 9.721933264761298E-4 26 0.0 0.0 0.0 0.0017013383213332271 0.0011666319917713556 27 0.0 0.0 0.0 0.001895776986628453 0.001215241658095162 28 4.860966632380649E-5 0.0 0.0 0.002430483316190324 0.001215241658095162 29 4.860966632380649E-5 0.0 0.0 0.0033540669763426475 0.001215241658095162 30 4.860966632380649E-5 0.0 0.0 0.005104014963999681 0.001215241658095162 31 4.860966632380649E-5 0.0 0.0 0.009041397936228006 0.0013124609907427752 32 4.860966632380649E-5 0.0 0.0 0.012978780908456332 0.0013610706570665817 33 1.4582899897141945E-4 0.0 0.0 0.016527286550094205 0.0014582899897141947 34 1.4582899897141945E-4 0.0 0.0 0.022457665841598598 0.0015555093223618077 35 1.4582899897141945E-4 0.0 0.0 0.027999167802512537 0.0015555093223618077 36 1.4582899897141945E-4 0.0 0.0 0.035533666082702545 0.0015555093223618077 37 1.4582899897141945E-4 0.0 0.0 0.04666527967085423 0.0015555093223618077 38 1.4582899897141945E-4 0.0 0.0 0.06153983756593901 0.0015555093223618077 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1190 0.0 27.91905 1 GTATCAA 2900 0.0 27.00988 1 TAATCGG 85 6.11874E-6 20.70515 15 ATACGAA 555 0.0 19.42557 40 GTCTACG 130 3.5863195E-8 18.617441 1 GTATTAC 225 0.0 18.579832 1 CCTTATA 180 1.4551915E-11 18.332684 2 CGCAATA 640 0.0 17.87654 36 TAATACC 185 2.1827873E-11 17.836775 4 TACGAAT 605 0.0 17.82015 41 CGAATGC 635 0.0 17.671244 43 TCAACGC 4505 0.0 17.286427 4 ATCAACG 4590 0.0 17.110092 3 ATCGTTT 660 0.0 16.9994 29 CAACGCA 4595 0.0 16.995722 5 TATCAAC 4740 0.0 16.940329 2 CGTAATC 80 0.0019897833 16.499016 13 AACGCAG 4750 0.0 16.487438 6 CAATACG 655 0.0 16.459835 38 TCGTTTA 670 0.0 16.41733 30 >>END_MODULE