##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062183_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1324816 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.287747883479668 32.0 32.0 32.0 32.0 32.0 2 31.44761536696417 32.0 32.0 32.0 32.0 32.0 3 31.577163923141025 32.0 32.0 32.0 32.0 32.0 4 31.659140590089493 32.0 32.0 32.0 32.0 32.0 5 31.62915151990918 32.0 32.0 32.0 32.0 32.0 6 35.279207829615586 36.0 36.0 36.0 36.0 36.0 7 35.28122244900424 36.0 36.0 36.0 36.0 36.0 8 35.23283308776464 36.0 36.0 36.0 36.0 36.0 9 35.32198358111617 36.0 36.0 36.0 36.0 36.0 10 35.19882836559945 36.0 36.0 36.0 36.0 36.0 11 35.32723638603399 36.0 36.0 36.0 36.0 36.0 12 35.241327097498825 36.0 36.0 36.0 36.0 36.0 13 35.279798100264486 36.0 36.0 36.0 36.0 36.0 14 35.24574657914759 36.0 36.0 36.0 36.0 36.0 15 35.22200214973249 36.0 36.0 36.0 36.0 36.0 16 35.23134533399355 36.0 36.0 36.0 36.0 36.0 17 35.209209429837806 36.0 36.0 36.0 36.0 36.0 18 35.20684155384597 36.0 36.0 36.0 36.0 36.0 19 35.193215510682236 36.0 36.0 36.0 36.0 36.0 20 35.19936806318764 36.0 36.0 36.0 36.0 36.0 21 35.19291131749617 36.0 36.0 36.0 36.0 36.0 22 35.17629617999783 36.0 36.0 36.0 36.0 36.0 23 35.14653280153621 36.0 36.0 36.0 36.0 36.0 24 35.1326410610983 36.0 36.0 36.0 36.0 36.0 25 35.1161821717129 36.0 36.0 36.0 36.0 36.0 26 35.076068676706804 36.0 36.0 36.0 36.0 36.0 27 35.05993964444874 36.0 36.0 36.0 36.0 36.0 28 35.041291017016704 36.0 36.0 36.0 36.0 36.0 29 35.01597353896692 36.0 36.0 36.0 36.0 36.0 30 35.00219200251205 36.0 36.0 36.0 36.0 36.0 31 35.00559171990677 36.0 36.0 36.0 36.0 36.0 32 34.98228508713663 36.0 36.0 36.0 36.0 36.0 33 34.95675625898238 36.0 36.0 36.0 36.0 36.0 34 34.94990021255782 36.0 36.0 36.0 36.0 36.0 35 34.93810914119395 36.0 36.0 36.0 36.0 36.0 36 34.91092574365044 36.0 36.0 36.0 32.0 36.0 37 34.90880167510054 36.0 36.0 36.0 36.0 36.0 38 34.88220099998792 36.0 36.0 36.0 32.0 36.0 39 34.861872894047174 36.0 36.0 36.0 32.0 36.0 40 34.85690541177039 36.0 36.0 36.0 32.0 36.0 41 34.82908645426988 36.0 36.0 36.0 32.0 36.0 42 34.7974375309477 36.0 36.0 36.0 32.0 36.0 43 34.79800138283354 36.0 36.0 36.0 32.0 36.0 44 34.750654430502045 36.0 36.0 36.0 32.0 36.0 45 34.73829648796512 36.0 36.0 36.0 32.0 36.0 46 34.70847272375938 36.0 36.0 36.0 32.0 36.0 47 34.696968484680134 36.0 36.0 36.0 32.0 36.0 48 34.66597399186 36.0 36.0 36.0 32.0 36.0 49 34.65570086713929 36.0 36.0 36.0 32.0 36.0 50 34.2426752092366 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 0.0 20 7.0 21 19.0 22 90.0 23 245.0 24 607.0 25 1364.0 26 2811.0 27 5354.0 28 9482.0 29 15507.0 30 23649.0 31 35681.0 32 54240.0 33 94183.0 34 218014.0 35 863562.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.247333222083874 17.71033509998482 11.906058137155483 26.13627354077582 2 16.291717965305388 19.553594276392914 37.20850358442554 26.946184173876155 3 18.862237707869273 23.102842594151166 28.289620179784137 29.745299518195427 4 12.618214618644869 15.715703702026321 35.138868445783 36.527213233545815 5 14.68143500682359 36.553227014166495 33.099011485368536 15.66632649364138 6 35.397572791350335 34.8809719704049 16.15698505601541 13.564470182229355 7 31.02294960205795 29.91743759133344 19.954922042004323 19.104690764604292 8 28.3309531285854 33.31111641163754 18.620774507554255 19.7371559522228 9 26.971594545959586 14.227636139660149 18.455921426069732 40.344847888310525 10 16.54693907743961 26.5989237726381 30.73369600086956 26.120441149052738 11 37.60431637299067 21.145804398497603 21.643911305419017 19.605967923092717 12 24.630967621163997 23.43095192087052 28.375336650523547 23.562743807441937 13 29.585391480779215 19.253239695172763 25.053667830098668 26.10770099394935 14 23.577764761295153 19.42118754604413 24.763740776077583 32.23730691658313 15 25.116469003997537 27.15094020603616 21.817595801983067 25.914994987983235 16 25.940024426217878 25.892168362764057 23.246799908816836 24.92100730220123 17 24.198001835726622 26.20990386589534 24.697014528810037 24.895079769568003 18 24.995093643475453 25.06061237368019 25.775581742918995 24.168712239925362 19 25.75753916015507 24.943992222316155 25.10107063924349 24.197397978285288 20 25.91137459503688 24.279671379788226 24.78283711198268 25.026116913192208 21 26.62415007065132 24.13701223415176 24.503402736681924 24.735434958514993 22 26.073658530694072 24.216796898588182 24.874624098742768 24.834920471974975 23 24.504628948192767 24.25938715971664 25.54839732339987 25.687586568690723 24 24.909118083086 24.718900117452044 25.232715074622806 25.139266724839143 25 25.121545639340255 24.335244800956513 25.196952621921163 25.34625693778207 26 24.735413891100954 25.280097825717746 25.474013156653243 24.510475126528057 27 25.309440599029294 24.820087408760504 24.900325329669915 24.970146662540287 28 24.865903275236075 24.505317823957004 25.474829973052334 25.153948927754588 29 24.71307098025747 24.805839349942065 25.399436143432432 25.08165352636803 30 24.808762720845657 24.903796363812035 25.44493709965474 24.84250381568757 31 25.328234755973288 24.724300920733025 24.669274328320807 25.278189994972877 32 25.266096166750827 24.624189407783646 24.616263701093672 25.49345072437185 33 24.62332306015433 24.582562467495315 25.182648970530845 25.61146550181951 34 25.44134963768116 24.643870772946862 25.230902777777775 24.683876811594203 35 25.72663030432951 24.41286097520105 25.425229503915265 24.43527921655417 36 24.648327460801987 25.05374347454582 24.932141315145092 25.365787749507103 37 25.674954502326024 24.756924289304063 24.839729678523362 24.72839152984655 38 24.890097945676985 24.55450417265492 25.263432808782504 25.291965072885592 39 25.623316266722224 24.481340329058753 24.700843668785463 25.194499735433563 40 25.735064895853384 24.668651849503515 25.00311364228213 24.59316961236097 41 24.655985289832866 25.204219813133776 25.379944716100116 24.759850180933242 42 25.87107001321004 24.97354217776939 24.938818645027364 24.216569163993206 43 25.301413996237798 24.295643877061135 25.196715470622514 25.206226656078552 44 24.825004585774362 24.832855129537744 24.920267914903125 25.421872369784765 45 25.003094844140627 25.099412432517298 24.88677399485501 25.010718728487056 46 24.76624614750553 24.936159741423364 25.043120009118418 25.254474101952685 47 25.12541496767064 24.735620870137577 25.25426441083271 24.884699751359072 48 25.749815626842317 25.31849189173276 24.257091289811957 24.674601191612965 49 25.072805310522767 25.348552121657715 24.432163868939874 25.146478698879648 50 25.211127482653882 25.46346898230062 24.440214010954172 24.885189524091327 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 121.0 1 80.0 2 39.0 3 117.0 4 195.0 5 198.5 6 202.0 7 158.0 8 114.0 9 170.0 10 226.0 11 400.0 12 574.0 13 1102.5 14 1631.0 15 2118.0 16 2605.0 17 2583.0 18 2561.0 19 2500.5 20 2440.0 21 2888.0 22 3336.0 23 4050.5 24 4765.0 25 6133.0 26 7501.0 27 9280.5 28 11060.0 29 13302.5 30 15545.0 31 17986.5 32 20428.0 33 23561.5 34 26695.0 35 30364.5 36 34034.0 37 39986.0 38 45938.0 39 50707.0 40 55476.0 41 60813.5 42 66151.0 43 69132.0 44 72113.0 45 78644.5 46 85176.0 47 91305.0 48 97434.0 49 101419.5 50 105405.0 51 103096.0 52 100787.0 53 99961.0 54 99135.0 55 99876.5 56 100618.0 57 96897.5 58 93177.0 59 85832.0 60 78487.0 61 68484.0 62 58481.0 63 50249.5 64 42018.0 65 35247.0 66 28476.0 67 24546.0 68 20616.0 69 18182.0 70 15748.0 71 12298.0 72 8848.0 73 7805.0 74 6762.0 75 4960.0 76 3158.0 77 2839.5 78 2521.0 79 2146.0 80 1771.0 81 1391.5 82 1012.0 83 865.5 84 719.0 85 563.0 86 407.0 87 286.5 88 166.0 89 110.0 90 54.0 91 45.5 92 37.0 93 29.0 94 21.0 95 20.0 96 19.0 97 13.5 98 8.0 99 6.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03509921377761138 2 0.004302484269513653 3 3.77410900834531E-4 4 7.54821801669062E-5 5 0.0 6 1.509643603338124E-4 7 0.0 8 0.0 9 0.0 10 2.264465405007186E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 7.54821801669062E-4 17 0.0 18 3.019287206676248E-4 19 0.0 20 3.019287206676248E-4 21 0.0 22 0.0 23 7.54821801669062E-5 24 0.001509643603338124 25 3.77410900834531E-4 26 8.303039818359681E-4 27 4.528930810014372E-4 28 0.001962536684339561 29 8.303039818359681E-4 30 0.0016606079636719362 31 1.509643603338124E-4 32 9.812683421697806E-4 33 5.283752611683434E-4 34 0.0012077148826704991 35 1.509643603338124E-4 36 3.019287206676248E-4 37 0.0017360901438388426 38 0.0 39 5.283752611683434E-4 40 7.54821801669062E-5 41 0.0013586792430043116 42 0.0049818238910158096 43 0.004528930810014372 44 0.005057306071182715 45 0.0024154297653409982 46 0.0018870545041726548 47 0.0010567505223366869 48 0.004302484269513653 49 0.0037741090083453096 50 0.0018115723240057489 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1324816.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.346418764676265 #Duplication Level Percentage of deduplicated Percentage of total 1 75.8952026222655 42.005276665618624 2 14.344940274128785 15.878821431324031 3 4.46856476166011 7.419571697277487 4 1.8020935832476808 3.989577044462485 5 0.9589176002815704 2.6536327533001116 6 0.5725857366547288 1.9014341975743958 7 0.3773401554937804 1.4619098383880778 8 0.27349795858927706 1.210970603789297 9 0.18143947003862002 0.9037822400278556 >10 0.9879611650180367 9.55678303809717 >50 0.07112780220573088 2.7162521131957593 >100 0.058226617330056074 6.649938417219764 >500 0.006454337204244833 2.493274648882708 >1k 0.0016479158819348511 1.1587753108421464 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1596 0.1204695595463823 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1427 0.10771307109817514 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1361 0.10273124720715933 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1351 0.10197642540549028 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.77410900834531E-4 2 0.0 0.0 0.0 0.0 3.77410900834531E-4 3 0.0 0.0 0.0 0.0 3.77410900834531E-4 4 0.0 0.0 0.0 0.0 3.77410900834531E-4 5 0.0 0.0 0.0 0.0 3.77410900834531E-4 6 0.0 0.0 0.0 0.0 3.77410900834531E-4 7 0.0 0.0 0.0 0.0 3.77410900834531E-4 8 0.0 0.0 0.0 0.0 3.77410900834531E-4 9 0.0 0.0 0.0 0.0 3.77410900834531E-4 10 0.0 0.0 0.0 0.0 3.77410900834531E-4 11 0.0 0.0 0.0 0.0 3.77410900834531E-4 12 0.0 0.0 0.0 0.0 9.057861620028743E-4 13 0.0 1.509643603338124E-4 0.0 0.0 0.0010567505223366867 14 0.0 1.509643603338124E-4 0.0 0.0 0.0010567505223366867 15 0.0 1.509643603338124E-4 0.0 0.0 0.0010567505223366867 16 0.0 1.509643603338124E-4 0.0 7.54821801669062E-5 0.0012077148826704991 17 0.0 1.509643603338124E-4 0.0 7.54821801669062E-5 0.0013586792430043116 18 0.0 1.509643603338124E-4 0.0 7.54821801669062E-5 0.0016606079636719362 19 0.0 1.509643603338124E-4 0.0 7.54821801669062E-5 0.0016606079636719362 20 0.0 1.509643603338124E-4 0.0 7.54821801669062E-5 0.001887054504172655 21 0.0 1.509643603338124E-4 0.0 7.54821801669062E-5 0.001962536684339561 22 0.0 1.509643603338124E-4 0.0 1.509643603338124E-4 0.0021135010446733733 23 0.0 1.509643603338124E-4 0.0 2.2644654050071858E-4 0.0021135010446733733 24 0.0 1.509643603338124E-4 0.0 3.77410900834531E-4 0.0021135010446733733 25 0.0 1.509643603338124E-4 0.0 7.54821801669062E-4 0.0021135010446733733 26 0.0 1.509643603338124E-4 0.0 0.0010567505223366867 0.0021135010446733733 27 0.0 1.509643603338124E-4 0.0 0.001509643603338124 0.0024154297653409982 28 0.0 1.509643603338124E-4 0.0 0.0021135010446733733 0.0024154297653409982 29 0.0 1.509643603338124E-4 0.0 0.003094769386843154 0.0024909119455079043 30 0.0 1.509643603338124E-4 0.0 0.004000555548846029 0.0024909119455079043 31 0.0 1.509643603338124E-4 0.0 0.00754821801669062 0.0024909119455079043 32 0.0 1.509643603338124E-4 0.0 0.012077148826704992 0.002566394125674811 33 0.0 1.509643603338124E-4 0.0 0.01547384693421577 0.002566394125674811 34 0.0 1.509643603338124E-4 0.0 0.02045567082523158 0.002943805026509342 35 0.0 2.2644654050071858E-4 0.0 0.024380744193910703 0.002943805026509342 36 0.0 2.2644654050071858E-4 0.0 0.032079926570935134 0.002943805026509342 37 0.0 2.2644654050071858E-4 0.0 0.04219453871330056 0.002943805026509342 38 0.0 2.2644654050071858E-4 0.0 0.054875544981340806 0.0032457337471769663 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATAC 40 7.035559E-4 27.497948 3 GTATCAA 1805 0.0 26.462759 1 GGTATCA 830 0.0 25.459257 1 TTATACG 55 0.0044857706 19.998508 4 TAGGTTG 155 3.45608E-11 19.869486 5 GTATAGT 135 2.581146E-9 19.56591 1 TTACACG 70 8.127963E-4 18.855736 4 GGCGTTA 400 0.0 18.702135 42 TATACTG 190 1.8189894E-12 18.524933 5 ATCAACG 2580 0.0 18.502495 3 TCAACGC 2620 0.0 18.220015 4 CAACGCA 2660 0.0 17.94603 5 CGCAATA 270 0.0 17.926617 36 TATCAAC 2730 0.0 17.809538 2 AACGCAG 2700 0.0 17.680162 6 TCTATAC 100 2.4848974E-5 17.598688 3 TCTAGCG 290 0.0 17.44895 28 GTATAGC 180 2.8376235E-10 17.120173 1 ATACGAA 300 0.0 16.868591 40 CGAGCCG 470 0.0 16.849808 15 >>END_MODULE