##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062182_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 931646 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.309497384199577 32.0 32.0 32.0 32.0 32.0 2 31.488703863913976 32.0 32.0 32.0 32.0 32.0 3 31.602685998759185 32.0 32.0 32.0 32.0 32.0 4 31.67126354860108 32.0 32.0 32.0 32.0 32.0 5 31.649667362925403 32.0 32.0 32.0 32.0 32.0 6 35.30552377190478 36.0 36.0 36.0 36.0 36.0 7 35.30455666637328 36.0 36.0 36.0 36.0 36.0 8 35.26315682136777 36.0 36.0 36.0 36.0 36.0 9 35.34208808925278 36.0 36.0 36.0 36.0 36.0 10 35.2300251383036 36.0 36.0 36.0 36.0 36.0 11 35.338307683390475 36.0 36.0 36.0 36.0 36.0 12 35.26845497109417 36.0 36.0 36.0 36.0 36.0 13 35.29492639908291 36.0 36.0 36.0 36.0 36.0 14 35.263106373021515 36.0 36.0 36.0 36.0 36.0 15 35.24374279501012 36.0 36.0 36.0 36.0 36.0 16 35.26276182155024 36.0 36.0 36.0 36.0 36.0 17 35.243450838623254 36.0 36.0 36.0 36.0 36.0 18 35.22991458128946 36.0 36.0 36.0 36.0 36.0 19 35.22261030477242 36.0 36.0 36.0 36.0 36.0 20 35.228950695865166 36.0 36.0 36.0 36.0 36.0 21 35.21849930123673 36.0 36.0 36.0 36.0 36.0 22 35.20639491824148 36.0 36.0 36.0 36.0 36.0 23 35.17378596591409 36.0 36.0 36.0 36.0 36.0 24 35.16081752081799 36.0 36.0 36.0 36.0 36.0 25 35.14170833127604 36.0 36.0 36.0 36.0 36.0 26 35.10558087513927 36.0 36.0 36.0 36.0 36.0 27 35.09065997170599 36.0 36.0 36.0 36.0 36.0 28 35.07691977424902 36.0 36.0 36.0 36.0 36.0 29 35.055109988128535 36.0 36.0 36.0 36.0 36.0 30 35.03205080041131 36.0 36.0 36.0 36.0 36.0 31 35.03682514603186 36.0 36.0 36.0 36.0 36.0 32 35.009769805269386 36.0 36.0 36.0 36.0 36.0 33 34.99361667414447 36.0 36.0 36.0 36.0 36.0 34 34.97335146611481 36.0 36.0 36.0 36.0 36.0 35 34.97173926577262 36.0 36.0 36.0 36.0 36.0 36 34.94289354540244 36.0 36.0 36.0 36.0 36.0 37 34.93119811602261 36.0 36.0 36.0 36.0 36.0 38 34.913978056042744 36.0 36.0 36.0 36.0 36.0 39 34.90464511198459 36.0 36.0 36.0 36.0 36.0 40 34.880189471108125 36.0 36.0 36.0 36.0 36.0 41 34.862679601479535 36.0 36.0 36.0 32.0 36.0 42 34.83235370516269 36.0 36.0 36.0 32.0 36.0 43 34.829003720297194 36.0 36.0 36.0 32.0 36.0 44 34.781132533172475 36.0 36.0 36.0 32.0 36.0 45 34.768429210236505 36.0 36.0 36.0 32.0 36.0 46 34.74629848676429 36.0 36.0 36.0 32.0 36.0 47 34.7194921676259 36.0 36.0 36.0 32.0 36.0 48 34.690858974331455 36.0 36.0 36.0 32.0 36.0 49 34.67739248598717 36.0 36.0 36.0 32.0 36.0 50 34.27963733005884 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 10.0 21 31.0 22 76.0 23 172.0 24 408.0 25 998.0 26 2074.0 27 3942.0 28 6802.0 29 10797.0 30 16041.0 31 24087.0 32 36343.0 33 62465.0 34 145950.0 35 621449.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.500878832746906 18.345969126503597 12.589158306928983 25.56399373382051 2 16.165393760164022 19.605193243845235 37.35078011367601 26.87863288231474 3 18.586431268663283 22.97309481539046 28.68086668484246 29.75960723110379 4 12.792090558001645 16.036348570165064 35.3363831326491 35.835177739184196 5 14.829023040940442 36.417480459316096 32.98044536229426 15.773051137449205 6 34.96671482515891 34.853259714526764 16.372742436504854 13.807283023809472 7 31.007378338982832 30.156304003881303 19.69041889301301 19.145898764122855 8 28.44857381451753 33.25275909519281 18.680163924924273 19.618503165365386 9 26.957986187886817 14.50164547478334 18.87680513843241 39.663563198897435 10 17.10220405604704 26.66688849627434 30.365288961687163 25.865618485991458 11 37.20050319541972 21.451602862031287 21.556578357015432 19.79131558553356 12 24.40057704321169 23.72553523548644 28.361416246084886 23.51247147521698 13 29.591926547207848 19.465655409887447 25.05060935162068 25.89180869128403 14 23.60853800692538 19.482292630462645 25.11189872548157 31.797270637130413 15 25.32807525605219 27.04535843013333 21.978197727463005 25.648368586351467 16 25.768942195297097 26.04168791063472 23.4506572838992 24.73871261016898 17 24.212200771537688 26.14458710712009 24.88058769103286 24.762624430309366 18 24.958648412217098 25.209280358935004 25.763998089401007 24.06807313944689 19 25.62768007127178 25.161515384078697 25.358800830788553 23.852003713860967 20 25.855182725571918 24.55489924788787 24.878306389893982 24.71161163664623 21 26.650787960233824 24.272309439422273 24.670958711785378 24.40594388855853 22 26.02061297960813 24.259214336775987 25.15816093237131 24.562011751244572 23 24.734958058058595 24.23680693826511 25.452613388146773 25.57562161552952 24 24.69311917151837 24.85691775293249 25.39629381558384 25.053669259965304 25 25.107202850871307 24.48561415560648 25.410000590353622 24.997182403168587 26 24.738150491283132 25.303603744786084 25.560676740636424 24.397569023294356 27 25.282940694084864 24.897600370957147 25.08855313832322 24.730905796634765 28 24.816021776838923 24.711688735466364 25.603135143490135 24.869154344204578 29 24.78830364915241 24.923441540249947 25.52152599552832 24.766728815069325 30 24.696956848887922 24.9063740764872 25.69176918378804 24.704899890836842 31 25.192536610132017 24.817177432079525 24.824047030991554 25.166238926796908 32 25.14090788579672 24.850773423554454 24.753310570533372 25.255008120115452 33 24.727202079768837 24.677504878483365 25.258307375579893 25.336985666167905 34 25.291368535847614 24.69274546551343 25.533200663777134 24.482685334861824 35 25.779374954381716 24.396013928066946 25.627278230740497 24.19733288681084 36 24.671199866902093 25.048704173800107 25.19800997160936 25.082085987688448 37 25.62600093599591 24.873125324700418 24.896417883532912 24.60445585577076 38 24.865667860968653 24.59839896269613 25.372512735524005 25.16342044081121 39 25.48591939341116 24.600809758317627 24.97649296506361 24.936777883207604 40 25.761422000869427 24.67141454094639 25.100011270387323 24.467152187796852 41 24.611276053574457 25.183064666748244 25.475452911967956 24.730206367709346 42 25.662114278783037 25.000778231835803 25.224157604291115 24.112949885090043 43 25.416325855891248 24.270664940607684 25.230302210600662 25.0827069929004 44 24.695707432585472 24.98145637498162 25.237578454830306 25.085257737602607 45 25.0892260066572 25.034053474420446 25.119495761697596 24.75722475722476 46 24.929504443340033 25.09029978993558 24.945927466056403 25.03426830066798 47 25.08428730135729 24.920059894701254 25.24497254826193 24.75068025567953 48 25.81737968344953 25.28281836185937 24.319749249950355 24.580052704740744 49 25.055763438505647 25.416427833845347 24.709268001554292 24.818540726094714 50 25.270733710090326 25.366157347029684 24.525484766029614 24.837624176850376 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 122.0 1 75.5 2 29.0 3 85.0 4 141.0 5 151.0 6 161.0 7 121.0 8 81.0 9 134.0 10 187.0 11 314.0 12 441.0 13 852.0 14 1263.0 15 1632.5 16 2002.0 17 2083.5 18 2165.0 19 2085.5 20 2006.0 21 2401.0 22 2796.0 23 3234.0 24 3672.0 25 4655.0 26 5638.0 27 7008.5 28 8379.0 29 9813.5 30 11248.0 31 12800.0 32 14352.0 33 16395.5 34 18439.0 35 21226.5 36 24014.0 37 28321.5 38 32629.0 39 35842.5 40 39056.0 41 42746.0 42 46436.0 43 48681.0 44 50926.0 45 55952.5 46 60979.0 47 65319.5 48 69660.0 49 72490.5 50 75321.0 51 73479.0 52 71637.0 53 70894.0 54 70151.0 55 70936.5 56 71722.0 57 68554.5 58 65387.0 59 59319.5 60 53252.0 61 46287.5 62 39323.0 63 33705.5 64 28088.0 65 23556.5 66 19025.0 67 16263.5 68 13502.0 69 11838.5 70 10175.0 71 8064.0 72 5953.0 73 5368.0 74 4783.0 75 3406.5 76 2030.0 77 1876.0 78 1722.0 79 1479.5 80 1237.0 81 947.5 82 658.0 83 533.5 84 409.0 85 331.5 86 254.0 87 170.5 88 87.0 89 63.5 90 40.0 91 30.5 92 21.0 93 18.0 94 15.0 95 16.5 96 18.0 97 15.0 98 12.0 99 7.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03187906136021622 2 0.0054741822537745025 3 4.293476277470198E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 9.660321624307945E-4 17 0.0 18 1.0733690693675495E-4 19 1.0733690693675495E-4 20 3.2201072081026484E-4 21 0.0 22 0.0 23 1.0733690693675495E-4 24 0.0015027166971145693 25 1.0733690693675495E-4 26 4.293476277470198E-4 27 2.146738138735099E-4 28 0.0015027166971145693 29 5.366845346837747E-4 30 0.0013953797901778144 31 5.366845346837747E-4 32 9.660321624307945E-4 33 4.293476277470198E-4 34 8.586952554940396E-4 35 2.146738138735099E-4 36 1.0733690693675495E-4 37 0.001932064324861589 38 0.0 39 0.0010733690693675495 40 1.0733690693675495E-4 41 8.586952554940396E-4 42 0.005044834626027482 43 0.004722823905217218 44 0.006332877509268541 45 0.002468748859545364 46 0.0028980964872923833 47 0.0011807059763043045 48 0.004400813184406952 49 0.0034347810219761583 50 0.0011807059763043045 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 931646.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.4567742933817 #Duplication Level Percentage of deduplicated Percentage of total 1 79.02126708410135 46.983496413964474 2 13.133170865748989 15.61711951842508 3 3.662721104148227 6.533207459668408 4 1.3915952949168988 3.3095906943042404 5 0.7240767142950136 2.1525632886466024 6 0.4504703398294304 1.6070107992660838 7 0.3024591550659967 1.258827200100813 8 0.20227064281380913 0.9621087964766304 9 0.14980666392718672 0.8016318904286905 >10 0.8206356796463323 8.991148273372993 >50 0.07784337481528474 3.270389497858102 >100 0.05896581557981003 6.674618995333045 >500 0.004717265111770795 1.8382871721548226 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 941 0.1010040294274864 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.0733690693675495E-4 2 0.0 0.0 0.0 0.0 1.0733690693675495E-4 3 0.0 0.0 0.0 0.0 1.0733690693675495E-4 4 0.0 0.0 0.0 0.0 2.146738138735099E-4 5 0.0 0.0 0.0 0.0 2.146738138735099E-4 6 0.0 0.0 0.0 0.0 2.146738138735099E-4 7 0.0 0.0 0.0 0.0 2.146738138735099E-4 8 0.0 0.0 0.0 0.0 2.146738138735099E-4 9 0.0 0.0 0.0 1.0733690693675495E-4 3.2201072081026484E-4 10 0.0 0.0 0.0 1.0733690693675495E-4 3.2201072081026484E-4 11 0.0 0.0 0.0 1.0733690693675495E-4 3.2201072081026484E-4 12 0.0 0.0 0.0 1.0733690693675495E-4 5.366845346837747E-4 13 0.0 0.0 0.0 1.0733690693675495E-4 7.513583485572846E-4 14 0.0 0.0 0.0 1.0733690693675495E-4 7.513583485572846E-4 15 0.0 0.0 0.0 1.0733690693675495E-4 7.513583485572846E-4 16 0.0 0.0 0.0 2.146738138735099E-4 7.513583485572846E-4 17 0.0 0.0 0.0 2.146738138735099E-4 7.513583485572846E-4 18 0.0 0.0 0.0 3.2201072081026484E-4 8.586952554940396E-4 19 0.0 0.0 0.0 3.2201072081026484E-4 8.586952554940396E-4 20 0.0 0.0 0.0 3.2201072081026484E-4 0.0010733690693675495 21 0.0 0.0 0.0 4.293476277470198E-4 0.0010733690693675495 22 0.0 0.0 0.0 5.366845346837747E-4 0.0011807059763043043 23 0.0 0.0 0.0 6.440214416205297E-4 0.0012880428832410594 24 0.0 0.0 0.0 0.0010733690693675495 0.0012880428832410594 25 0.0 0.0 0.0 0.0013953797901778142 0.0012880428832410594 26 0.0 0.0 0.0 0.0016100536040513241 0.0012880428832410594 27 0.0 0.0 0.0 0.001932064324861589 0.0013953797901778142 28 0.0 0.0 0.0 0.0025760857664821188 0.0013953797901778142 29 0.0 0.0 0.0 0.0037567917427864233 0.0013953797901778142 30 0.0 0.0 0.0 0.006762225137015561 0.0013953797901778142 31 0.0 0.0 0.0 0.011163038321422514 0.0015027166971145693 32 0.0 0.0 0.0 0.015885862226639732 0.0016100536040513241 33 0.0 0.0 0.0 0.02060868613185695 0.0016100536040513241 34 0.0 0.0 0.0 0.02565352075788443 0.0016100536040513241 35 0.0 0.0 0.0 0.032630419708773506 0.0016100536040513241 36 0.0 0.0 0.0 0.0412173722637139 0.0016100536040513241 37 0.0 0.0 0.0 0.05280975821288343 0.0016100536040513241 38 0.0 0.0 0.0 0.06751491446321886 0.0016100536040513241 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1340 0.0 24.96043 1 GGTATCA 765 0.0 22.148413 1 TGTAGGA 180 0.0 19.554388 2 TAAGGTT 95 1.5972908E-5 18.52521 5 CGCAATA 215 0.0 18.419481 36 CGGACTT 60 0.0074088234 18.334206 26 ACGGACC 385 0.0 18.284622 8 TCTAGCG 220 0.0 18.000856 28 CTAGCGG 225 0.0 17.600838 29 CGTCTTA 75 0.001291086 17.59895 15 AAATTCG 115 4.2731917E-6 17.216364 21 ACACGCT 245 0.0 17.060205 9 CGGATCG 130 7.3087176E-7 16.923882 26 CGGACCA 355 0.0 16.731394 9 AGCGAAA 395 0.0 16.70786 17 TACGAAT 240 0.0 16.502556 41 TCAACGC 2020 0.0 16.444561 4 CCTATTC 215 1.2732926E-11 16.371115 3 ATCGATT 135 1.0842505E-6 16.297071 29 GCGAAAG 365 0.0 16.273 18 >>END_MODULE