##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062181_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2443774 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.301135047676258 32.0 32.0 32.0 32.0 32.0 2 31.47201009585993 32.0 32.0 32.0 32.0 32.0 3 31.58221218492381 32.0 32.0 32.0 32.0 32.0 4 31.654361655374025 32.0 32.0 32.0 32.0 32.0 5 31.626589447305683 32.0 32.0 32.0 32.0 32.0 6 35.27395618416433 36.0 36.0 36.0 36.0 36.0 7 35.27185124320007 36.0 36.0 36.0 36.0 36.0 8 35.22437017498345 36.0 36.0 36.0 36.0 36.0 9 35.31027050782929 36.0 36.0 36.0 36.0 36.0 10 35.18728163897316 36.0 36.0 36.0 36.0 36.0 11 35.30994150850283 36.0 36.0 36.0 36.0 36.0 12 35.22643501403976 36.0 36.0 36.0 36.0 36.0 13 35.27053156306598 36.0 36.0 36.0 36.0 36.0 14 35.22289827128041 36.0 36.0 36.0 36.0 36.0 15 35.2074152519832 36.0 36.0 36.0 36.0 36.0 16 35.21489875905055 36.0 36.0 36.0 36.0 36.0 17 35.18801165737912 36.0 36.0 36.0 36.0 36.0 18 35.19068129867983 36.0 36.0 36.0 36.0 36.0 19 35.1831941087842 36.0 36.0 36.0 36.0 36.0 20 35.177749660975195 36.0 36.0 36.0 36.0 36.0 21 35.17396043987701 36.0 36.0 36.0 36.0 36.0 22 35.161576315976845 36.0 36.0 36.0 36.0 36.0 23 35.12411867873216 36.0 36.0 36.0 36.0 36.0 24 35.103943327001595 36.0 36.0 36.0 36.0 36.0 25 35.08957415865788 36.0 36.0 36.0 36.0 36.0 26 35.04971040693616 36.0 36.0 36.0 36.0 36.0 27 35.0320442888745 36.0 36.0 36.0 36.0 36.0 28 35.017279421092134 36.0 36.0 36.0 36.0 36.0 29 35.000483678114264 36.0 36.0 36.0 36.0 36.0 30 34.98319975578757 36.0 36.0 36.0 36.0 36.0 31 34.98870353805221 36.0 36.0 36.0 36.0 36.0 32 34.95991937061283 36.0 36.0 36.0 36.0 36.0 33 34.939397014617555 36.0 36.0 36.0 32.0 36.0 34 34.92696828757487 36.0 36.0 36.0 36.0 36.0 35 34.91628153830919 36.0 36.0 36.0 36.0 36.0 36 34.893291687365526 36.0 36.0 36.0 32.0 36.0 37 34.88616091340688 36.0 36.0 36.0 32.0 36.0 38 34.865224034628405 36.0 36.0 36.0 32.0 36.0 39 34.85573747817924 36.0 36.0 36.0 32.0 36.0 40 34.8396414725748 36.0 36.0 36.0 32.0 36.0 41 34.81363088403428 36.0 36.0 36.0 32.0 36.0 42 34.777713487417415 36.0 36.0 36.0 32.0 36.0 43 34.78164511120914 36.0 36.0 36.0 32.0 36.0 44 34.72040376892462 36.0 36.0 36.0 32.0 36.0 45 34.72028059877877 36.0 36.0 36.0 32.0 36.0 46 34.700609385319595 36.0 36.0 36.0 32.0 36.0 47 34.685126775225534 36.0 36.0 36.0 32.0 36.0 48 34.65144853820362 36.0 36.0 36.0 32.0 36.0 49 34.647867192301746 36.0 36.0 36.0 32.0 36.0 50 34.21851979765723 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 1.0 19 13.0 20 27.0 21 64.0 22 146.0 23 421.0 24 1039.0 25 2607.0 26 5638.0 27 10895.0 28 18429.0 29 29689.0 30 44750.0 31 66069.0 32 100954.0 33 173758.0 34 402362.0 35 1586911.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.45148954825421 17.674005081480104 11.895059699409208 25.979445670856478 2 16.892181941617974 19.45706097772074 35.97734221126235 27.673414869398933 3 18.771552279738614 22.579484869056664 27.85449676667211 30.79446608453261 4 12.856958131152881 15.487479611453434 34.268348873504664 37.38721338388902 5 15.518415369015301 35.84046642610978 32.15866115279072 16.482457052084197 6 36.386276466758574 34.06310651603074 15.743769981909123 13.806847035301562 7 32.078089054061465 29.43148589026645 19.343155299958177 19.147269755713907 8 29.190751681620313 32.136154979961326 18.352965536092945 20.32012780232542 9 27.12366200802529 14.151267670414693 18.370233908700232 40.35483641285978 10 17.489452771742023 25.53722322477156 29.21003204065849 27.763291962827925 11 38.39082501082342 20.76910549011488 21.013277005156777 19.826792493904918 12 25.168653075120694 23.248385489001848 27.245277181932536 24.33768425394492 13 29.410125486235632 18.556339497842274 25.008777407403464 27.02475760851863 14 24.372507441359144 19.27113554690409 23.70644748655154 32.64990952518523 15 25.910579292520502 26.49181143591838 21.188784232911882 26.408825038649237 16 27.12668531555524 25.14129888581348 22.389960372475812 25.342055426155476 17 24.887162233496223 25.65499100980696 24.00569774455412 25.452149012142694 18 25.94962944533628 24.128712656556328 25.159497481144903 24.762160416962487 19 26.264212648141765 24.4073715490876 24.283178395383533 25.0452374073871 20 26.593757429609756 23.546988279170414 23.722127582435164 26.13712670878467 21 27.926980124586038 23.441088840902978 23.482131932875927 25.149799101635057 22 27.09972362419765 23.282881313902184 24.29308111142847 25.324313950471687 23 25.01524281705264 23.569937318262653 24.9308651290995 26.483954735585208 24 25.455539455533728 24.311805908212417 24.556757214626206 25.675897421627653 25 25.696680575521313 23.66547219927268 24.406991337553865 26.230855887652137 26 25.342576463082928 25.09709419210798 24.76175043304153 24.798578911767557 27 26.055429998031727 23.927567562701356 24.274081776208618 25.742920663058307 28 25.489260514318428 23.672863591406447 25.133862495135528 25.704013399139598 29 25.082925288264097 24.093059646463697 25.181420807065813 25.64259425820639 30 25.1375248031604 24.325040992478336 25.269453677783364 25.267980526577897 31 26.03686617087289 24.05189057181603 23.912474148422223 25.99876910888885 32 25.92309936650665 23.874731918268267 23.77218464565334 26.429984069571738 33 25.242637797563265 23.866319443023595 24.3888735664544 26.502169192958736 34 26.252437847672066 23.956871272640374 24.54567849300707 25.245012386680493 35 26.71008599022983 23.41067025238914 24.90754024730682 24.971703510074207 36 24.946353248513358 24.50829949209498 24.264045136928118 26.281302122463547 37 26.56190856172442 24.09477334806494 24.22903559115694 25.114282499053697 38 25.485990112015266 23.556924658335838 24.757117474856514 26.19996775479238 39 26.487647303865604 23.681436541588816 23.759594853500225 26.07132130104536 40 26.40307688278612 24.082115680186202 24.435217360703042 25.07959007632463 41 25.055682978379494 24.83421960965649 24.908531782162214 25.2015656298018 42 26.845102295955424 24.455475324770987 24.229624188456178 24.469798190817407 43 26.153474705973828 23.446346873132924 24.401798940932864 25.998379479960388 44 25.449887034618847 24.21052114668558 24.10809319920169 26.23149861949388 45 25.769279245215078 24.412902317617924 24.200029790695808 25.617788646471197 46 25.503578987342184 24.382127488226907 24.1706865141007 25.943607010330204 47 25.705972980106434 24.04500451149972 24.713402120916378 25.53562038747747 48 26.736430387485743 24.7437775123308 23.28544238866266 25.234349711520792 49 25.49962413353265 24.892222285423625 23.787129857465377 25.821023723578346 50 25.886817653938355 24.75498600913846 23.774520836521752 25.58367550040143 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 27.0 1 33.5 2 40.0 3 118.0 4 196.0 5 222.0 6 248.0 7 200.0 8 152.0 9 229.5 10 307.0 11 520.5 12 734.0 13 1376.5 14 2019.0 15 2574.0 16 3129.0 17 3272.5 18 3416.0 19 3381.5 20 3347.0 21 3993.0 22 4639.0 23 5295.5 24 5952.0 25 8076.0 26 10200.0 27 13245.5 28 16291.0 29 18786.0 30 21281.0 31 23519.5 32 25758.0 33 30285.0 34 34812.0 35 41344.5 36 47877.0 37 61976.0 38 76075.0 39 85503.5 40 94932.0 41 105326.0 42 115720.0 43 118502.0 44 121284.0 45 135490.5 46 149697.0 47 163476.5 48 177256.0 49 187466.5 50 197677.0 51 188983.0 52 180289.0 53 183437.5 54 186586.0 55 192015.0 56 197444.0 57 192619.5 58 187795.0 59 174082.0 60 160369.0 61 141035.5 62 121702.0 63 105128.5 64 88555.0 65 75927.5 66 63300.0 67 55335.0 68 47370.0 69 42349.5 70 37329.0 71 28865.0 72 20401.0 73 18262.5 74 16124.0 75 11727.0 76 7330.0 77 6623.5 78 5917.0 79 5055.5 80 4194.0 81 3375.0 82 2556.0 83 2187.0 84 1818.0 85 1402.5 86 987.0 87 688.0 88 389.0 89 241.0 90 93.0 91 72.0 92 51.0 93 41.5 94 32.0 95 35.0 96 38.0 97 33.5 98 29.0 99 19.5 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0321224466746925 2 0.004542154880115755 3 2.8644219964693953E-4 4 0.0 5 0.0 6 4.0920314235277076E-5 7 0.0 8 0.0 9 0.0 10 1.636812569411083E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 7.365656562349874E-4 17 0.0 18 2.0460157117638538E-4 19 0.0 20 2.0460157117638538E-4 21 4.0920314235277076E-5 22 0.0 23 0.0 24 9.411672274113727E-4 25 2.8644219964693953E-4 26 5.31964085058602E-4 27 2.8644219964693953E-4 28 0.0014322109982346978 29 3.273625138822166E-4 30 0.0013503703697641436 31 6.547250277644332E-4 32 9.411672274113727E-4 33 3.273625138822166E-4 34 8.184062847055415E-4 35 3.273625138822166E-4 36 4.0920314235277076E-4 37 0.0020050953975285766 38 0.0 39 6.547250277644332E-4 40 8.184062847055415E-5 41 0.001186689112823035 42 0.005278720536350743 43 0.004664915822821587 44 0.004296632994704093 45 0.00237337822564607 46 0.0027007407395282872 47 7.774859704702643E-4 48 0.003969270480821877 49 0.0035600673384691057 50 0.0014731313124699747 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2443774.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.39233183372805 #Duplication Level Percentage of deduplicated Percentage of total 1 70.13909427287277 28.330815703870115 2 15.549746113063033 12.561810098581299 3 5.712083735644349 6.921731451365624 4 2.659752157215447 4.297343669188814 5 1.4770093277357046 2.982992544370608 6 0.9241939600965113 2.2398209468967303 7 0.6336373623723297 1.7915863422233933 8 0.46001884323004305 1.4864987012412496 9 0.33828445279863995 1.22976880844704 >10 1.8483970011734883 13.483396454362659 >50 0.12985118124740708 3.6268131889502495 >100 0.10112822913688421 8.699568447464026 >500 0.016102400833940878 4.554870564430596 >1k 0.010700962579517649 7.79298307860775 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 4714 0.19289836130509613 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 4086 0.16720040396534214 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 4016 0.16433598196887272 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 3905 0.159793827088757 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 3903 0.15971198646028642 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 3863 0.15807517389087533 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 3614 0.14788601564629136 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA 3463 0.14170704819676452 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 3050 0.12480695841759508 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 2994 0.12251542082041957 No Hit GCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATCTGTCAAT 2978 0.12186069579265514 No Hit CTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCTTTGCAACC 2974 0.12169701453571403 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 2961 0.12116505045065543 No Hit GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGAT 2878 0.11776866436912742 No Hit ACCATACTCCCCCCGGAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCG 2821 0.11543620645771663 No Hit GAGTATGGTTGCAAAGCTGAAACTTAAAGGAATTGACGGAAGGGCACCAC 2675 0.10946184057936618 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA 2569 0.1051242872704268 No Hit GTTATTGCTCAATCTCGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGT 2515 0.10291459030172184 No Hit GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGCTCAATCTCGGGT 2470 0.10107317616113438 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 2456 0.1005002917618405 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.2276094270583123E-4 2 0.0 0.0 0.0 0.0 1.2276094270583123E-4 3 0.0 0.0 0.0 0.0 1.2276094270583123E-4 4 0.0 0.0 0.0 0.0 1.2276094270583123E-4 5 0.0 0.0 0.0 0.0 1.2276094270583123E-4 6 0.0 0.0 0.0 0.0 2.0460157117638538E-4 7 0.0 0.0 0.0 0.0 2.0460157117638538E-4 8 0.0 0.0 0.0 0.0 2.0460157117638538E-4 9 0.0 0.0 0.0 0.0 2.0460157117638538E-4 10 0.0 0.0 0.0 0.0 2.0460157117638538E-4 11 0.0 0.0 0.0 4.0920314235277076E-5 2.4552188541166245E-4 12 0.0 0.0 0.0 4.0920314235277076E-5 5.728843992938791E-4 13 0.0 0.0 0.0 4.0920314235277076E-5 8.184062847055415E-4 14 0.0 0.0 0.0 4.0920314235277076E-5 8.184062847055415E-4 15 0.0 0.0 0.0 8.184062847055415E-5 9.820875416466498E-4 16 0.0 0.0 0.0 1.636812569411083E-4 0.0010230078558819268 17 0.0 0.0 0.0 1.636812569411083E-4 0.0010230078558819268 18 0.0 0.0 0.0 2.0460157117638538E-4 0.0010230078558819268 19 0.0 0.0 0.0 2.0460157117638538E-4 0.001063928170117204 20 0.0 0.0 0.0 3.273625138822166E-4 0.0013094500555288664 21 0.0 0.0 0.0 4.0920314235277076E-4 0.0013503703697641434 22 0.0 0.0 0.0 6.956453419997103E-4 0.0014731313124699747 23 0.0 0.0 0.0 0.0010230078558819268 0.0014731313124699747 24 0.0 0.0 0.0 0.0015140516267052517 0.0015140516267052517 25 0.0 0.0 0.0 0.0018414141405874683 0.0015140516267052517 26 0.0 0.0 0.0 0.002086936025999131 0.001636812569411083 27 0.0 0.0 0.0 0.0024961391683519015 0.001636812569411083 28 0.0 0.0 0.0 0.002864421996469395 0.001636812569411083 29 0.0 0.0 0.0 0.0036419079669396596 0.001636812569411083 30 0.0 0.0 0.0 0.004705836137056864 0.001636812569411083 31 0.0 0.0 0.0 0.007570258133526259 0.0017186531978816372 32 0.0 0.0 0.0 0.01063928170117204 0.0017186531978816372 33 0.0 0.0 0.0 0.013667384954582543 0.0017186531978816372 34 0.0 0.0 0.0 0.01775941637811025 0.0017186531978816372 35 0.0 0.0 0.0 0.022178810315520176 0.0017186531978816372 36 0.0 0.0 0.0 0.027784893365753134 0.0017186531978816372 37 0.0 0.0 0.0 0.0364190796693966 0.0017595735121169141 38 0.0 0.0 0.0 0.04718112231327447 0.0018004938263521913 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1250 0.0 27.465578 1 GTATCAA 3080 0.0 26.79506 1 GTATAGG 285 0.0 22.393774 1 CGCAATA 775 0.0 19.020151 36 TATAACG 70 8.1253966E-4 18.857548 2 TAGCGGC 835 0.0 16.861946 30 TCAACGC 4920 0.0 16.812336 4 ATCAACG 4950 0.0 16.710442 3 CGAGCCG 1285 0.0 16.607021 15 ACCGTCG 1010 0.0 16.553793 8 TCTAGCG 865 0.0 16.53147 28 CGGTCCA 905 0.0 16.529726 10 CAACGCA 5035 0.0 16.472033 5 CAATACG 880 0.0 16.251013 38 AACGCAG 5090 0.0 16.250824 6 ATACCGT 1070 0.0 16.24234 6 AGAGCGA 1635 0.0 16.146805 15 TACCGTC 1065 0.0 16.112032 7 GTATAGA 205 1.05501385E-10 16.103178 1 GCGAAAG 1630 0.0 16.061365 18 >>END_MODULE