##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062180_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1242265 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.23176697403533 32.0 32.0 32.0 32.0 32.0 2 30.797469139032334 32.0 32.0 32.0 32.0 32.0 3 30.826538620986664 32.0 32.0 32.0 32.0 32.0 4 30.827210780308548 32.0 32.0 32.0 32.0 32.0 5 30.77355958672264 32.0 32.0 32.0 32.0 32.0 6 34.41674602439898 36.0 36.0 36.0 32.0 36.0 7 34.33599513791341 36.0 36.0 36.0 32.0 36.0 8 34.29565913875059 36.0 36.0 36.0 32.0 36.0 9 34.40749759511859 36.0 36.0 36.0 32.0 36.0 10 34.11638418533888 36.0 36.0 36.0 32.0 36.0 11 34.41991282053346 36.0 36.0 36.0 32.0 36.0 12 34.23986025525954 36.0 36.0 36.0 32.0 36.0 13 34.32906907946372 36.0 36.0 36.0 32.0 36.0 14 34.21657214845464 36.0 36.0 36.0 32.0 36.0 15 34.18618249729325 36.0 36.0 36.0 32.0 36.0 16 34.195925185045056 36.0 36.0 36.0 32.0 36.0 17 34.127657142397155 36.0 36.0 36.0 32.0 36.0 18 34.14231987538891 36.0 36.0 36.0 32.0 36.0 19 34.13736119105022 36.0 36.0 36.0 32.0 36.0 20 34.110334751441926 36.0 36.0 36.0 32.0 36.0 21 34.08298229443798 36.0 36.0 36.0 32.0 36.0 22 34.056848579006896 36.0 36.0 36.0 32.0 36.0 23 34.03309036316728 36.0 36.0 36.0 32.0 36.0 24 34.001466675789786 36.0 36.0 36.0 32.0 36.0 25 33.66649064410573 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 1.0 4 19.0 5 100.0 6 245.0 7 57.0 8 204.0 9 155.0 10 88.0 11 27.0 12 36.0 13 62.0 14 251.0 15 343.0 16 478.0 17 624.0 18 902.0 19 1295.0 20 1788.0 21 2633.0 22 3715.0 23 5540.0 24 7857.0 25 10821.0 26 14618.0 27 18427.0 28 24242.0 29 31574.0 30 41232.0 31 56295.0 32 80093.0 33 113857.0 34 253345.0 35 571341.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.14881819660069 17.34025408652337 11.86488431512396 25.646043401751978 2 16.267341349892373 19.64827065466061 38.35905791209906 25.72533008334796 3 19.279826960121778 23.363362009632468 28.300424147338273 29.056386882907482 4 12.842682870867941 15.71367962085003 35.69883435696419 35.74480315131784 5 14.642497368846987 36.610913869699345 33.55925952469338 15.187329236760288 6 34.131733150762166 35.07114234509977 16.925313626386902 13.871810877751154 7 30.186214682345586 30.59169838201367 20.18200029492654 19.040086640714204 8 27.762252413415204 33.56492449515706 19.234556560137957 19.438266531289788 9 27.13277876545518 14.868968429603674 18.705866803777425 39.29238600116372 10 16.218810754345295 26.920361229418084 31.381080270696376 25.479747745540248 11 36.217771741101835 21.662387702377544 22.71731025782607 19.402530298694547 12 24.680718672144323 23.66909356746357 28.994976129967753 22.655211630424358 13 29.311042406813975 20.21891703687465 25.201894992037037 25.26814556427434 14 23.172749376041107 19.999564820403798 25.68631448817641 31.141371315378684 15 24.663359776631776 27.851870241375032 22.494079678102143 24.99069030389105 16 24.893761912245285 26.440449854736087 24.372423630671033 24.293364602347594 17 23.422798994820976 26.473878401707324 25.67107305601181 24.432249547459893 18 23.762055493952914 25.74403994429975 26.75803914489801 23.735865416849325 19 25.145172583552288 25.35103685494183 25.897564194603373 23.606226366902504 20 25.435269169971303 24.89820220337645 25.705736287711918 23.960792338940337 21 25.701705266465506 24.69852677546318 25.26872147314397 24.331046484927345 22 25.193952110669542 24.97735748105603 25.596038123233317 24.232652285041112 23 24.142328548284578 25.130649635018855 25.77183381575884 24.955188000937728 24 24.17734348940751 25.224990774773964 26.114560387765657 24.483105348052874 25 24.379732822859186 25.121515566802742 25.96489362302097 24.533857987317102 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 573.0 1 573.0 2 576.0 3 579.0 4 579.0 5 579.0 6 1246.0 7 1913.0 8 1913.0 9 1913.0 10 2186.5 11 2460.0 12 2460.0 13 2460.0 14 3192.0 15 3924.0 16 3924.0 17 3924.0 18 6534.0 19 9144.0 20 9144.0 21 9144.0 22 14342.5 23 19541.0 24 19541.0 25 19541.0 26 28844.5 27 38148.0 28 38148.0 29 38148.0 30 49147.5 31 60147.0 32 60147.0 33 60147.0 34 71122.0 35 82097.0 36 82097.0 37 82097.0 38 94632.0 39 107167.0 40 107167.0 41 107167.0 42 120666.5 43 134166.0 44 134166.0 45 134166.0 46 146137.0 47 158108.0 48 158108.0 49 158108.0 50 162692.0 51 167276.0 52 167276.0 53 167276.0 54 155718.5 55 144161.0 56 144161.0 57 144161.0 58 130497.5 59 116834.0 60 116834.0 61 116834.0 62 101594.5 63 86355.0 64 86355.0 65 86355.0 66 70145.0 67 53935.0 68 53935.0 69 53935.0 70 40993.0 71 28051.0 72 28051.0 73 28051.0 74 21262.5 75 14474.0 76 14474.0 77 14474.0 78 11059.0 79 7644.0 80 7644.0 81 7644.0 82 5347.0 83 3050.0 84 3050.0 85 3050.0 86 2216.0 87 1382.0 88 1382.0 89 1382.0 90 937.5 91 493.0 92 493.0 93 493.0 94 319.0 95 145.0 96 145.0 97 145.0 98 321.5 99 498.0 100 498.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 8.8547934619425E-4 2 2.4149436714388634E-4 3 6.439849790503637E-4 4 0.009498778440992865 5 0.03332622266585632 6 0.05956861056215863 7 0.1028766004032956 8 0.10344008725996466 9 0.11422683565905825 10 0.1298434714010296 11 0.1368468080482023 12 0.12783101834149718 13 0.1224376441419504 14 0.11253637508905105 15 0.1306484526248425 16 0.11430733378143955 17 0.12002270047051153 18 0.10762598962379202 19 0.09305582947277755 20 0.08685747404941781 21 0.08935291584323796 22 0.09957617738566248 23 0.07792218246509401 24 0.08878942898656889 25 0.08581099845846096 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1242265.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.42754980328436 #Duplication Level Percentage of deduplicated Percentage of total 1 73.48599710612302 39.996627673375215 2 15.004536079126757 16.33320269443697 3 5.155806740554645 8.418537844429414 4 2.231148501046052 4.857437846368288 5 1.148204091320265 3.1246967682334286 6 0.6958959485188356 2.2725546837547643 7 0.43586365875094046 1.6606093695875987 8 0.3087383594590835 1.3443097948514862 9 0.22940003946204648 1.1237113865426338 >10 1.1801586275533051 11.398804249596466 >50 0.07346550177965164 2.745102782246233 >100 0.04647899670054603 4.834542003563261 >500 0.0037123703491127 1.2483779840037246 >1k 5.93979255858032E-4 0.6414849190105893 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 3507 0.28230691519120316 No Hit TATCAACGCAGAGTACTTTTTTTTT 2069 0.1665506152069003 No Hit GGTATCAACGCAGAGTACTTTTTTT 1321 0.1063380196656913 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.6099624476259092E-4 2 0.0 0.0 0.0 0.0 2.4149436714388637E-4 3 0.0 0.0 0.0 0.0 2.4149436714388637E-4 4 0.0 0.0 0.0 0.0 2.4149436714388637E-4 5 0.0 0.0 0.0 0.0 2.4149436714388637E-4 6 0.0 0.0 0.0 0.0 2.4149436714388637E-4 7 0.0 0.0 0.0 0.0 2.4149436714388637E-4 8 0.0 0.0 0.0 0.0 2.4149436714388637E-4 9 0.0 0.0 0.0 0.0 2.4149436714388637E-4 10 0.0 0.0 0.0 0.0 2.4149436714388637E-4 11 0.0 0.0 0.0 0.0 2.4149436714388637E-4 12 0.0 0.0 0.0 0.0 5.634868566690682E-4 13 0.0 0.0 0.0 0.0 5.634868566690682E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCTGGT 40 0.005276005 14.250938 12 ATTAGGC 40 0.0052788276 14.249789 3 CCGTCGT 105 1.366061E-9 13.573962 9 CGCATCG 125 1.0186341E-10 12.919808 13 CTAATAG 60 4.0915044E-4 12.666478 3 TGTACGC 60 4.0942876E-4 12.665458 2 TAGGACA 190 0.0 12.499814 4 CGGACAT 115 5.30963E-9 12.392619 5 TGTAGGA 390 0.0 12.178326 2 CGTCGTA 135 3.6925485E-10 11.965197 10 TCTAGAC 80 2.8657028E-5 11.874825 3 CGCCAGT 145 9.822543E-11 11.791503 18 GCCTTAT 65 8.044148E-4 11.688365 1 GGTATCA 840 0.0 11.644881 1 CATCGCC 165 7.2759576E-12 11.51498 15 GCGACGA 100 1.9287E-6 11.399831 13 TCGCCAG 150 1.7644197E-10 11.398452 17 GATCTAT 75 2.0796768E-4 11.396156 1 GTCTATA 110 4.970625E-7 11.226201 2 GCACCGC 60 0.005868129 11.084956 6 >>END_MODULE