##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062180_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1242265 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.287437060530564 32.0 32.0 32.0 32.0 32.0 2 31.48929254225145 32.0 32.0 32.0 32.0 32.0 3 31.58958354296386 32.0 32.0 32.0 32.0 32.0 4 31.6681022165158 32.0 32.0 32.0 32.0 32.0 5 31.650474737676745 32.0 32.0 32.0 32.0 32.0 6 35.293825391522745 36.0 36.0 36.0 36.0 36.0 7 35.30029180569363 36.0 36.0 36.0 36.0 36.0 8 35.25782502123138 36.0 36.0 36.0 36.0 36.0 9 35.31966367884469 36.0 36.0 36.0 36.0 36.0 10 35.22225451091353 36.0 36.0 36.0 36.0 36.0 11 35.33165548413583 36.0 36.0 36.0 36.0 36.0 12 35.25822429191839 36.0 36.0 36.0 36.0 36.0 13 35.28481443170338 36.0 36.0 36.0 36.0 36.0 14 35.25490052444527 36.0 36.0 36.0 36.0 36.0 15 35.23812149581611 36.0 36.0 36.0 36.0 36.0 16 35.24281051144482 36.0 36.0 36.0 36.0 36.0 17 35.22814455852817 36.0 36.0 36.0 36.0 36.0 18 35.22652413132464 36.0 36.0 36.0 36.0 36.0 19 35.213208936901545 36.0 36.0 36.0 36.0 36.0 20 35.205222718180096 36.0 36.0 36.0 36.0 36.0 21 35.19311580057395 36.0 36.0 36.0 36.0 36.0 22 35.17619348528696 36.0 36.0 36.0 36.0 36.0 23 35.15108129102889 36.0 36.0 36.0 36.0 36.0 24 35.13612473989044 36.0 36.0 36.0 36.0 36.0 25 35.122674308621754 36.0 36.0 36.0 36.0 36.0 26 35.08771638901523 36.0 36.0 36.0 36.0 36.0 27 35.06875425130709 36.0 36.0 36.0 36.0 36.0 28 35.04458951994945 36.0 36.0 36.0 36.0 36.0 29 35.02279223837104 36.0 36.0 36.0 36.0 36.0 30 35.00432999400289 36.0 36.0 36.0 36.0 36.0 31 35.00520903349929 36.0 36.0 36.0 36.0 36.0 32 34.974415281763555 36.0 36.0 36.0 36.0 36.0 33 34.958492753156534 36.0 36.0 36.0 36.0 36.0 34 34.94117921699476 36.0 36.0 36.0 36.0 36.0 35 34.923977573223105 36.0 36.0 36.0 36.0 36.0 36 34.9017206473659 36.0 36.0 36.0 36.0 36.0 37 34.87541627591536 36.0 36.0 36.0 32.0 36.0 38 34.86449751059556 36.0 36.0 36.0 32.0 36.0 39 34.82903406278049 36.0 36.0 36.0 32.0 36.0 40 34.82389264770399 36.0 36.0 36.0 32.0 36.0 41 34.79477084197011 36.0 36.0 36.0 32.0 36.0 42 34.762687510313825 36.0 36.0 36.0 32.0 36.0 43 34.75649559474025 36.0 36.0 36.0 32.0 36.0 44 34.69947072484534 36.0 36.0 36.0 32.0 36.0 45 34.679359878930825 36.0 36.0 36.0 32.0 36.0 46 34.63552221144442 36.0 36.0 36.0 32.0 36.0 47 34.605851408515896 36.0 36.0 36.0 32.0 36.0 48 34.56958458943945 36.0 36.0 36.0 32.0 36.0 49 34.541927044551684 36.0 36.0 36.0 32.0 36.0 50 34.15696892369986 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 1.0 19 3.0 20 17.0 21 33.0 22 86.0 23 287.0 24 638.0 25 1539.0 26 3066.0 27 5843.0 28 10287.0 29 15936.0 30 23284.0 31 33950.0 32 50745.0 33 84121.0 34 189296.0 35 823132.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.67201698746313 17.94135717719512 12.331693584688091 26.054932250653657 2 15.706531058128181 20.047689467824505 38.01560614488936 26.230173329157957 3 18.713443701892192 23.677774897726888 28.68122827551676 28.927553124864158 4 12.629028427911921 15.994654924673881 35.74591572651568 35.630400920898516 5 14.281654880399916 36.87184296426286 33.5229600769562 15.323542078381022 6 34.27846483146456 35.26135007055683 16.724987744121407 13.7351973538572 7 30.134794105927483 30.55233786671926 20.31748459467183 18.995383432681432 8 27.751647192829225 33.58164320817217 19.144868445943498 19.521841153055107 9 27.14203491203568 14.526691164928579 18.814584649813042 39.5166892732227 10 16.109780207749722 26.982831346638076 31.397593426196043 25.509795019416163 11 36.413084164811856 21.53002781210128 22.71479917730919 19.34208884577767 12 24.62689090241688 23.58363439655339 29.082546061062704 22.70692863996703 13 29.370786426406603 20.018192575658173 25.388705308448678 25.222315689486543 14 23.290360752335452 19.802779600165827 25.66658482690891 31.240274820589807 15 24.838903132584434 27.684672755007988 22.52659456718172 24.949829545225857 16 24.937271434171834 26.226135171707625 24.47722170211156 24.35937169200898 17 23.555682563704202 26.230071683577982 25.73661819338064 24.47762755933718 18 23.962439576096887 25.500758694803444 26.93032485017287 23.6064768789268 19 25.201949664524076 25.045541812737216 26.072939348689694 23.679569174049014 20 25.51728135082398 24.722361752413335 25.81520514158021 23.945151755182472 21 25.71055749824514 24.56369982547993 25.45771269231017 24.268029983964762 22 25.284299243720138 24.674767461048972 25.846337134186342 24.194596161044544 23 24.186565818537765 24.768889704603854 26.02385644275291 25.020688034105472 24 24.26053650950049 25.005956923393963 26.278726055582922 24.45478051152262 25 24.429529012777486 24.840150596129806 26.200571054599546 24.529749336493158 26 23.86956031748587 25.518088000901585 26.533817397324235 24.078534284288313 27 24.388855795083156 25.240207363997875 25.92669811472639 24.444238726192584 28 24.17743946664477 25.141014402104574 26.061763784877268 24.61978234637339 29 24.133253800932334 25.189070573736117 25.9928469138128 24.684828711518755 30 24.201472322510273 25.33376802669339 26.110259165791245 24.354500485005094 31 24.733852225901 24.86828452313966 25.708285134927362 24.689578116031978 32 24.392637266392754 25.351859842093738 25.678765085457428 24.57673780605608 33 24.142430616432456 25.080075765076742 26.11512395543288 24.662369663057923 34 24.567175449004907 25.16528516470557 26.139487557627426 24.128051828662095 35 24.761080611144205 25.032199378551994 26.17334535443466 24.033374655869142 36 24.132429390901436 25.400438876823085 26.037663552455122 24.42946817982036 37 24.82052437954324 25.16079952987772 25.551628925400287 24.46704716517875 38 24.33168446345989 25.22368415756702 25.892060067698917 24.552571311274164 39 24.896116253197818 25.095994860954363 25.56425658520721 24.443632300640612 40 25.106660098014594 25.166711745651487 25.76159334891778 23.965034807416135 41 24.374927551164976 25.237551680168984 26.155880913434913 24.231639855231126 42 24.805043314315984 25.644119822991325 25.633413003874576 23.91742385881811 43 24.436641034558264 25.03526024962325 26.13839084457153 24.38970787124696 44 24.117272486497757 25.54602677022479 25.616546758535858 24.7201539847416 45 24.492386706219033 25.631060145624616 25.41878147049471 24.457771677661633 46 24.42253230872766 25.25546716641148 25.491735051528135 24.830265473332723 47 24.49965787884886 25.388609378144494 25.715033205876438 24.396699537130207 48 24.68061058722571 25.674642211406407 25.162170125276322 24.48257707609156 49 24.61598899387144 25.525733426607427 25.254766276745528 24.6035113027756 50 24.584684712968173 25.95172143426962 24.985007031601555 24.478586821160654 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 245.0 1 158.5 2 72.0 3 195.0 4 318.0 5 306.5 6 295.0 7 249.5 8 204.0 9 283.0 10 362.0 11 667.5 12 973.0 13 1683.5 14 2394.0 15 3210.5 16 4027.0 17 4029.0 18 4031.0 19 3840.5 20 3650.0 21 3981.0 22 4312.0 23 5024.5 24 5737.0 25 6999.0 26 8261.0 27 10673.5 28 13086.0 29 15660.0 30 18234.0 31 21417.5 32 24601.0 33 28818.5 34 33036.0 35 37646.5 36 42257.0 37 46245.5 38 50234.0 39 53987.0 40 57740.0 41 61311.0 42 64882.0 43 67370.5 44 69859.0 45 74821.5 46 79784.0 47 83416.0 48 87048.0 49 90007.0 50 92966.0 51 92017.5 52 91069.0 53 90181.0 54 89293.0 55 87466.5 56 85640.0 57 82198.0 58 78756.0 59 72345.0 60 65934.0 61 57862.0 62 49790.0 63 42995.5 64 36201.0 65 30693.5 66 25186.0 67 21496.5 68 17807.0 69 15308.0 70 12809.0 71 10214.5 72 7620.0 73 6565.0 74 5510.0 75 4182.0 76 2854.0 77 2468.0 78 2082.0 79 1747.0 80 1412.0 81 1081.5 82 751.0 83 628.0 84 505.0 85 385.5 86 266.0 87 176.5 88 87.0 89 58.0 90 29.0 91 23.5 92 18.0 93 14.0 94 10.0 95 11.5 96 13.0 97 11.5 98 10.0 99 7.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.032843233931568544 2 0.004990883587640319 3 2.4149436714388634E-4 4 0.0 5 0.0 6 3.2199248952518184E-4 7 0.0 8 0.0 9 0.0 10 8.049812238129546E-5 11 0.0 12 8.049812238129546E-5 13 0.0 14 0.0 15 0.0 16 6.439849790503637E-4 17 0.0 18 0.0 19 0.0 20 8.049812238129546E-5 21 8.049812238129546E-5 22 0.0 23 8.049812238129546E-5 24 0.001046475590956841 25 1.6099624476259092E-4 26 4.024906119064773E-4 27 4.024906119064773E-4 28 0.0012879699581007274 29 3.2199248952518184E-4 30 8.049812238129546E-4 31 3.2199248952518184E-4 32 7.244831014316591E-4 33 3.2199248952518184E-4 34 0.0014489662028633183 35 4.024906119064773E-4 36 2.4149436714388634E-4 37 0.002817434283345341 38 0.0 39 8.8547934619425E-4 40 8.049812238129546E-5 41 7.244831014316591E-4 42 0.0053128760771655 43 0.005876362933834568 44 0.0051518798324029095 45 0.0024149436714388634 46 0.0024954417938201595 47 0.0012074718357194317 48 0.004105404241446068 49 0.0038639098743021814 50 0.0012879699581007274 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1242265.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.0143233631604 #Duplication Level Percentage of deduplicated Percentage of total 1 73.09503754075628 40.943690690502706 2 15.380460690231251 17.230521971539808 3 5.216669883310094 8.766247011677756 4 2.270881509757238 5.088075648278552 5 1.162463382061885 3.2557299890323756 6 0.6954727656323275 2.3373861830640394 7 0.43395273168776044 1.7015298045959495 8 0.3087502116234336 1.383554735385537 9 0.2209690928388694 1.1139690797586577 >10 1.1125714573430543 10.961902801204301 >50 0.06242770028742362 2.4110189312447328 >100 0.03831866065412795 4.001762227888844 >500 0.0018797756865084163 0.6852233171425286 >1k 1.4459812973141662E-4 0.11938760868417105 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1474 0.11865423239002951 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.049812238129546E-5 2 0.0 0.0 0.0 0.0 8.049812238129546E-5 3 0.0 0.0 0.0 0.0 8.049812238129546E-5 4 0.0 0.0 0.0 0.0 8.049812238129546E-5 5 0.0 0.0 0.0 0.0 8.049812238129546E-5 6 0.0 0.0 0.0 0.0 1.6099624476259092E-4 7 0.0 0.0 0.0 0.0 1.6099624476259092E-4 8 0.0 0.0 0.0 0.0 1.6099624476259092E-4 9 0.0 0.0 0.0 0.0 1.6099624476259092E-4 10 0.0 0.0 0.0 0.0 1.6099624476259092E-4 11 0.0 0.0 0.0 0.0 1.6099624476259092E-4 12 0.0 0.0 0.0 0.0 3.2199248952518184E-4 13 0.0 0.0 0.0 0.0 4.024906119064773E-4 14 0.0 0.0 0.0 8.049812238129546E-5 4.024906119064773E-4 15 0.0 0.0 0.0 1.6099624476259092E-4 6.439849790503637E-4 16 0.0 0.0 0.0 1.6099624476259092E-4 6.439849790503637E-4 17 0.0 0.0 0.0 1.6099624476259092E-4 7.244831014316591E-4 18 0.0 0.0 0.0 2.4149436714388637E-4 7.244831014316591E-4 19 0.0 0.0 0.0 2.4149436714388637E-4 7.244831014316591E-4 20 0.0 0.0 0.0 2.4149436714388637E-4 0.0011269737133381365 21 0.0 0.0 0.0 4.8298873428777273E-4 0.001207471835719432 22 0.0 0.0 0.0 6.439849790503637E-4 0.001207471835719432 23 0.0 0.0 0.0 0.0013684680804820228 0.001207471835719432 24 0.0 0.0 0.0 0.002253947426676273 0.001207471835719432 25 0.0 0.0 0.0 0.0031394267728705226 0.001207471835719432 26 0.0 0.0 0.0 0.0039444079966834775 0.0012879699581007274 27 0.0 0.0 0.0 0.004668891098115136 0.0015294643252446137 28 0.0 0.0 0.0 0.005715366689071978 0.0015294643252446137 29 0.0 0.0 0.0 0.008049812238129546 0.0015294643252446137 30 0.0 0.0 0.0 0.012316212724338204 0.0015294643252446137 31 0.0 0.0 0.0 0.01915855312674832 0.0016099624476259092 32 0.0 0.0 0.0 0.026403384141064908 0.0016904605700072046 33 0.0 0.0 0.0 0.034131203889669275 0.0016904605700072046 34 0.0 0.0 0.0 0.04234201237256141 0.0017709586923885 35 0.0 0.0 0.0 0.05328975701641759 0.0017709586923885 36 0.0 0.0 0.0 0.06681344157647523 0.0017709586923885 37 0.0 0.0 0.0 0.08573050033607967 0.0017709586923885 38 0.0 0.0 0.0 0.11269737133381363 0.0018514568147697955 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2055 0.0 22.599083 1 TTAGGAC 340 0.0 21.998491 3 GGTATCA 1050 0.0 21.590769 1 TAGGACG 390 0.0 21.434427 4 GTCCTAC 525 0.0 19.284958 1 GTGTACG 75 0.0012869678 17.608006 1 GACGTGA 275 0.0 17.598793 7 TCCTACA 655 0.0 17.465857 2 ATACCGT 290 0.0 17.447079 6 GTAGGAC 515 0.0 17.086206 3 ACCGTCG 285 0.0 16.98129 8 AACGCAG 2805 0.0 16.783161 6 AATCACG 250 0.0 16.720198 34 AGGACGT 500 0.0 16.718853 5 GGTCTAA 120 6.3791776E-6 16.507505 1 TACCGTC 295 0.0 16.405653 7 GTATAGC 230 1.8189894E-12 16.268267 1 TATGGCG 545 0.0 16.145681 16 CGCAATA 150 1.8382889E-7 16.132875 36 ATCAACG 2940 0.0 16.087332 3 >>END_MODULE