##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062178_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1155738 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.258854515469768 32.0 32.0 32.0 32.0 32.0 2 30.805472347538974 32.0 32.0 32.0 32.0 32.0 3 30.835638354021413 32.0 32.0 32.0 32.0 32.0 4 30.83306510645146 32.0 32.0 32.0 32.0 32.0 5 30.768027009581758 32.0 32.0 32.0 32.0 32.0 6 34.42210864400063 36.0 36.0 36.0 32.0 36.0 7 34.349107669731374 36.0 36.0 36.0 32.0 36.0 8 34.30682473017241 36.0 36.0 36.0 32.0 36.0 9 34.44665226893984 36.0 36.0 36.0 32.0 36.0 10 34.149746741908636 36.0 36.0 36.0 32.0 36.0 11 34.43497315135437 36.0 36.0 36.0 32.0 36.0 12 34.25117890040823 36.0 36.0 36.0 32.0 36.0 13 34.33710235364762 36.0 36.0 36.0 32.0 36.0 14 34.242188108377505 36.0 36.0 36.0 32.0 36.0 15 34.20496860014986 36.0 36.0 36.0 32.0 36.0 16 34.20793813130658 36.0 36.0 36.0 32.0 36.0 17 34.13479439111632 36.0 36.0 36.0 32.0 36.0 18 34.149675791572136 36.0 36.0 36.0 32.0 36.0 19 34.14952437317108 36.0 36.0 36.0 32.0 36.0 20 34.129101924484615 36.0 36.0 36.0 32.0 36.0 21 34.113451318551434 36.0 36.0 36.0 32.0 36.0 22 34.080345199344485 36.0 36.0 36.0 32.0 36.0 23 34.05903933244386 36.0 36.0 36.0 32.0 36.0 24 34.03142840332325 36.0 36.0 36.0 32.0 36.0 25 33.67987640797482 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 4 17.0 5 78.0 6 245.0 7 67.0 8 203.0 9 166.0 10 93.0 11 34.0 12 42.0 13 56.0 14 207.0 15 282.0 16 425.0 17 592.0 18 753.0 19 1029.0 20 1565.0 21 2230.0 22 3326.0 23 4976.0 24 7010.0 25 9744.0 26 13298.0 27 16994.0 28 22401.0 29 29896.0 30 38986.0 31 52084.0 32 74188.0 33 106114.0 34 235686.0 35 532951.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.87620768244376 17.763639478561526 12.162225302537106 25.197927536457605 2 16.722735028536025 19.267269574607262 37.72267273035617 26.28732266650054 3 19.411937248156356 22.653792807470968 28.26420080174643 29.670069142626243 4 13.05297060803619 15.625438075772182 35.07747342989316 36.24411788629846 5 15.264660264089017 36.1870849807161 33.00576093504407 15.54249382015081 6 34.86695030745068 34.753009137804746 16.451252054144565 13.928788500600009 7 30.96573462371664 30.237706898896395 19.59031225070139 19.206246226685572 8 28.33350945971932 33.03712339992066 18.81315646779399 19.816210672566033 9 26.632379655449324 15.141206525100639 18.83438022199064 39.3920335974594 10 16.919022138431043 26.5830121851477 30.302497331466515 26.195468344954737 11 36.75425994825503 21.805840283782825 21.6293424785248 19.810557289437337 12 24.500235229290077 23.908306496400517 28.053453798454854 23.538004475854557 13 29.14553839302964 19.61102317590766 25.023759832065423 26.21967859899728 14 23.491821214512612 19.949427792537872 24.859124610508243 31.699626382441277 15 25.1238095568155 27.199200826205693 22.088266077047837 25.588723539930964 16 25.81375927591148 26.2483821840126 23.26345754348395 24.674400996591974 17 24.033998270804492 26.462668956089175 24.774970674715455 24.72836209839088 18 24.728286056074378 25.559431442849334 25.64821977233806 24.06406272873823 19 25.41046576182463 25.375648599561927 25.21403460756641 23.999851031047033 20 25.55386482069598 24.7409841347099 24.870026561954656 24.835124482639465 21 26.592531968423465 24.56248836232468 24.584832698944705 24.260146970307147 22 25.86909072011364 24.47321010965406 25.19410327922809 24.463595891004207 23 24.517457604074927 24.624665192778817 25.479294993197776 25.378582209948487 24 24.442450575974906 25.192200933442226 25.40265413531881 24.96269435526406 25 24.735597741365574 24.728322998579692 25.302681262341082 25.233397997713652 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 601.0 1 601.0 2 501.0 3 401.0 4 401.0 5 401.0 6 798.5 7 1196.0 8 1196.0 9 1196.0 10 1461.0 11 1726.0 12 1726.0 13 1726.0 14 2395.5 15 3065.0 16 3065.0 17 3065.0 18 5258.5 19 7452.0 20 7452.0 21 7452.0 22 11789.0 23 16126.0 24 16126.0 25 16126.0 26 23727.5 27 31329.0 28 31329.0 29 31329.0 30 39320.5 31 47312.0 32 47312.0 33 47312.0 34 59087.0 35 70862.0 36 70862.0 37 70862.0 38 82730.0 39 94598.0 40 94598.0 41 94598.0 42 108864.5 43 123131.0 44 123131.0 45 123131.0 46 136451.5 47 149772.0 48 149772.0 49 149772.0 50 153989.5 51 158207.0 52 158207.0 53 158207.0 54 147799.5 55 137392.0 56 137392.0 57 137392.0 58 125977.0 59 114562.0 60 114562.0 61 114562.0 62 100236.0 63 85910.0 64 85910.0 65 85910.0 66 70097.0 67 54284.0 68 54284.0 69 54284.0 70 41161.5 71 28039.0 72 28039.0 73 28039.0 74 21420.5 75 14802.0 76 14802.0 77 14802.0 78 11787.5 79 8773.0 80 8773.0 81 8773.0 82 6096.5 83 3420.0 84 3420.0 85 3420.0 86 2476.0 87 1532.0 88 1532.0 89 1532.0 90 1063.5 91 595.0 92 595.0 93 595.0 94 360.0 95 125.0 96 125.0 97 125.0 98 325.5 99 526.0 100 526.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.001038297607243164 2 5.19148803621582E-4 3 9.51772806639567E-4 4 0.010036876870017253 5 0.032014176223330894 6 0.06541274925631933 7 0.10806947595389266 8 0.10936734796294661 9 0.11810635282390991 10 0.133767341733161 11 0.13982407777541275 12 0.13368081693255737 13 0.12797018009272 14 0.11672195601425236 15 0.133767341733161 16 0.1214808200474502 17 0.12494181207159409 18 0.11308791438890128 19 0.0982056486850826 20 0.09336025985128117 21 0.09370635905369556 22 0.10365671112310922 23 0.0838425317848855 24 0.09405245825610994 25 0.09154323903860563 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1155738.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.356780938540865 #Duplication Level Percentage of deduplicated Percentage of total 1 79.28797382069779 47.062788931359215 2 13.080798279225773 15.528681559224932 3 3.5902770345835298 6.3932186235134605 4 1.4483926906336417 3.4388771060369945 5 0.7272828238969941 2.1584583629208636 6 0.41359528367546994 1.4729810790203124 7 0.27583952110207244 1.1461062219773415 8 0.17710513186655505 0.8409912412235602 9 0.14409778639007678 0.7697862666436 >10 0.724705916981583 7.781946481449306 >50 0.06315594614467382 2.716458225023061 >100 0.05960030332847714 7.238512500509294 >500 0.005711081580858614 2.325828813161687 >1k 0.0014643798925278496 1.125364587936481 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 2331 0.2016893102069846 No Hit TATCAACGCAGAGTACTTTTTTTTT 1483 0.12831627929513437 No Hit GCGCAAGACGGACCAGAGCGAAAGC 1351 0.11689500561545955 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.652480060359701E-5 2 0.0 0.0 0.0 0.0 8.652480060359701E-5 3 0.0 0.0 0.0 0.0 8.652480060359701E-5 4 0.0 0.0 0.0 0.0 8.652480060359701E-5 5 0.0 0.0 0.0 0.0 8.652480060359701E-5 6 0.0 0.0 0.0 0.0 1.7304960120719402E-4 7 0.0 0.0 0.0 0.0 1.7304960120719402E-4 8 0.0 0.0 0.0 0.0 2.59574401810791E-4 9 0.0 0.0 0.0 0.0 2.59574401810791E-4 10 0.0 0.0 0.0 0.0 2.59574401810791E-4 11 0.0 0.0 0.0 0.0 2.59574401810791E-4 12 0.0 0.0 0.0 0.0 5.19148803621582E-4 13 0.0 0.0 0.0 0.0 5.19148803621582E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCGTA 135 0.0 14.0766735 9 GCGTAAC 135 0.0 14.0766735 11 CGCGTAA 145 0.0 13.105869 10 CGTCGTA 240 0.0 13.064914 10 CGACCCG 60 4.0902142E-4 12.666812 5 GGTATCA 670 0.0 12.614083 1 GTCGTAG 265 0.0 12.19093 11 GTATAAA 125 1.4169927E-9 12.154873 1 GGGTCGC 180 0.0 12.141658 6 CCGTCGT 260 0.0 12.059919 9 CGACCAT 255 0.0 11.923771 10 CCGACCA 260 0.0 11.694468 9 CGTCAAT 195 0.0 11.692441 19 TTAGAGT 150 1.7644197E-10 11.398648 4 TATAGGT 75 2.0768886E-4 11.39766 2 GTATCAA 1510 0.0 11.319729 1 CGTTATT 110 4.9765185E-7 11.22497 2 CGGTTCT 205 0.0 11.1225605 12 GGTCGCG 180 3.6379788E-12 11.085861 7 AGCCCCG 250 0.0 11.018693 16 >>END_MODULE