##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062178_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1155738 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.294244889412653 32.0 32.0 32.0 32.0 32.0 2 31.475565396309545 32.0 32.0 32.0 32.0 32.0 3 31.59218179206706 32.0 32.0 32.0 32.0 32.0 4 31.666426992968994 32.0 32.0 32.0 32.0 32.0 5 31.644907409810873 32.0 32.0 32.0 32.0 32.0 6 35.29345059174311 36.0 36.0 36.0 36.0 36.0 7 35.292841457146864 36.0 36.0 36.0 36.0 36.0 8 35.2482223479716 36.0 36.0 36.0 36.0 36.0 9 35.326717647079185 36.0 36.0 36.0 36.0 36.0 10 35.216703958855724 36.0 36.0 36.0 36.0 36.0 11 35.329585078971185 36.0 36.0 36.0 36.0 36.0 12 35.25079386504554 36.0 36.0 36.0 36.0 36.0 13 35.283199133367596 36.0 36.0 36.0 36.0 36.0 14 35.25413372234884 36.0 36.0 36.0 36.0 36.0 15 35.237834180411134 36.0 36.0 36.0 36.0 36.0 16 35.24455110068199 36.0 36.0 36.0 36.0 36.0 17 35.219773858781146 36.0 36.0 36.0 36.0 36.0 18 35.22487968726476 36.0 36.0 36.0 36.0 36.0 19 35.210837577374804 36.0 36.0 36.0 36.0 36.0 20 35.20950682594152 36.0 36.0 36.0 36.0 36.0 21 35.20307889850468 36.0 36.0 36.0 36.0 36.0 22 35.19288541174557 36.0 36.0 36.0 36.0 36.0 23 35.163307773907235 36.0 36.0 36.0 36.0 36.0 24 35.147303281539585 36.0 36.0 36.0 36.0 36.0 25 35.13074416520007 36.0 36.0 36.0 36.0 36.0 26 35.091763877280144 36.0 36.0 36.0 36.0 36.0 27 35.07949725629857 36.0 36.0 36.0 36.0 36.0 28 35.06545514640862 36.0 36.0 36.0 36.0 36.0 29 35.04442010213388 36.0 36.0 36.0 36.0 36.0 30 35.02625508549516 36.0 36.0 36.0 36.0 36.0 31 35.02805220560369 36.0 36.0 36.0 36.0 36.0 32 35.00408397058849 36.0 36.0 36.0 36.0 36.0 33 34.98251766403804 36.0 36.0 36.0 36.0 36.0 34 34.96786815004785 36.0 36.0 36.0 36.0 36.0 35 34.96196715864668 36.0 36.0 36.0 36.0 36.0 36 34.939970823837236 36.0 36.0 36.0 36.0 36.0 37 34.92791272762512 36.0 36.0 36.0 36.0 36.0 38 34.91834741091839 36.0 36.0 36.0 36.0 36.0 39 34.899980791494265 36.0 36.0 36.0 36.0 36.0 40 34.88474204361196 36.0 36.0 36.0 36.0 36.0 41 34.859995085391326 36.0 36.0 36.0 32.0 36.0 42 34.818128330123265 36.0 36.0 36.0 32.0 36.0 43 34.82090837196666 36.0 36.0 36.0 32.0 36.0 44 34.776480482600725 36.0 36.0 36.0 32.0 36.0 45 34.76052357887341 36.0 36.0 36.0 32.0 36.0 46 34.74453379572187 36.0 36.0 36.0 32.0 36.0 47 34.70828250001298 36.0 36.0 36.0 32.0 36.0 48 34.681797258548215 36.0 36.0 36.0 32.0 36.0 49 34.66878738952946 36.0 36.0 36.0 32.0 36.0 50 34.26599194627156 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 1.0 19 2.0 20 13.0 21 26.0 22 79.0 23 229.0 24 517.0 25 1211.0 26 2625.0 27 4936.0 28 8503.0 29 13908.0 30 20528.0 31 30191.0 32 46008.0 33 78404.0 34 179798.0 35 768758.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.60586639201312 18.18858485626128 12.651863648362681 25.553685103362916 2 16.092855109445157 19.819882961997692 37.350749723326174 26.736512205230973 3 18.786107912094188 22.998571474306008 28.554852877427994 29.660467736171807 4 12.80618963813598 16.047149094344913 35.277026454092535 35.86963481342657 5 14.878372087791526 36.44069849741031 32.942933433009905 15.737995981788261 6 35.137868855863275 34.75490942568199 16.27093038548596 13.836291332968775 7 30.934346711798007 30.289909996902413 19.64346590663282 19.132277384666768 8 28.339294892094923 33.185116349899374 18.670581048645975 19.805007709359735 9 26.867508033827736 14.817372103365988 18.789466124675318 39.52565373813096 10 16.911200385554846 26.69153968420151 30.33631353846074 26.060946391782906 11 37.191301142646516 21.58231363855822 21.55350087995722 19.67288433883804 12 24.504083105340484 23.859905964846703 28.0670013445954 23.569009585217408 13 29.335281871842927 19.480972331099263 25.063119842040326 26.120625955017484 14 23.556809588332303 19.690275823759364 24.966212065364296 31.786702522544036 15 25.15440350667712 27.176920720786196 22.038212812938575 25.63046295959811 16 25.824825716063195 26.255203425716584 23.378837080319002 24.54113377790122 17 24.080976830388895 26.419309566701106 24.70430149393721 24.795412108972794 18 24.896126976875383 25.323819066258963 25.770287037373524 24.009766919492133 19 25.510799160363334 25.149471593042716 25.383434653874843 23.95629459271911 20 25.700399659783013 24.53291547442186 25.018408230966845 24.748276634828287 21 26.745335015375453 24.33146612813631 24.710531279580668 24.212667576907567 22 25.836738084237087 24.381650512486395 25.267318371464814 24.514293031811707 23 24.523291611074484 24.425691635993623 25.625877145166122 25.42513960776577 24 24.60548470999081 25.019338560657324 25.424712863474085 24.95046386587778 25 24.810402366628395 24.51388161839588 25.52354039024449 25.152175624731232 26 24.632052011968153 25.493063282727686 25.691119236779397 24.183765468524765 27 25.15697802696985 24.89973912704902 25.103938186521997 24.83934465945913 28 24.787492515514085 24.8067012539326 25.670056172580995 24.735750057972318 29 24.591817840437333 25.030500097773363 25.58607776529894 24.79160429649037 30 24.60470734412828 25.10309537035595 25.766747481669533 24.525449803846243 31 25.218994649297073 24.896862259201065 24.882066492693834 25.00207659880803 32 25.119880941050244 24.850440846910608 24.878475076358665 25.15120313568048 33 24.65495983075705 24.537631896585292 25.406689249698246 25.400719022959418 34 25.215146150558176 24.83261603528864 25.558999278375673 24.393238535777513 35 25.600223580471663 24.53709151570947 25.48107872386081 24.38160617995805 36 24.502308485674927 25.228512393833885 25.19165276499131 25.077526355499874 37 25.51132715766303 24.986545160670683 25.126977342223622 24.375150339442666 38 24.73735396776778 24.63958094308572 25.542640286985456 25.080424802161044 39 25.449563177654355 24.694890601895075 24.89805171263605 24.95749450781452 40 25.502752353907198 24.915508532210588 25.17387158681293 24.407867527069286 41 24.54413777707788 25.39529402399539 25.543080429376612 24.517487769550115 42 25.607072613352095 25.0839989651016 25.108313885723334 24.20061453582297 43 25.23336748326538 24.378032825468466 25.265469573102777 25.123130118163377 44 24.80288729445073 24.93371890586008 25.102969323794394 25.160424475894793 45 24.963831819692103 25.21709560859453 25.083065677262155 24.73600689445121 46 24.834819867994337 25.011767678340895 25.093362683307546 25.060049770357217 47 24.87743634736953 24.92770777848729 25.391398999416815 24.80345687472636 48 25.623176417246118 25.308300135330175 24.427183021081742 24.64134042634197 49 24.953188705758567 25.574108941389838 24.620491059994603 24.852211292856992 50 25.08522796100107 25.45694300715396 24.721127189536602 24.73670184230837 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 290.0 1 164.5 2 39.0 3 96.5 4 154.0 5 170.0 6 186.0 7 151.5 8 117.0 9 169.5 10 222.0 11 382.5 12 543.0 13 1023.5 14 1504.0 15 1999.0 16 2494.0 17 2576.5 18 2659.0 19 2545.0 20 2431.0 21 2844.0 22 3257.0 23 3858.0 24 4459.0 25 5665.5 26 6872.0 27 8613.0 28 10354.0 29 12336.5 30 14319.0 31 16269.5 32 18220.0 33 20826.0 34 23432.0 35 27083.0 36 30734.0 37 36187.0 38 41640.0 39 46180.0 40 50720.0 41 55201.0 42 59682.0 43 62764.0 44 65846.0 45 71668.0 46 77490.0 47 81663.5 48 85837.0 49 88881.5 50 91926.0 51 89229.5 52 86533.0 53 85751.0 54 84969.0 55 85043.5 56 85118.0 57 81679.0 58 78240.0 59 71404.0 60 64568.0 61 56724.0 62 48880.0 63 42121.5 64 35363.0 65 29768.5 66 24174.0 67 20809.0 68 17444.0 69 15329.5 70 13215.0 71 10328.0 72 7441.0 73 6632.0 74 5823.0 75 4316.5 76 2810.0 77 2478.5 78 2147.0 79 1860.0 80 1573.0 81 1206.5 82 840.0 83 721.5 84 603.0 85 481.5 86 360.0 87 230.5 88 101.0 89 70.0 90 39.0 91 31.5 92 24.0 93 19.0 94 14.0 95 14.5 96 15.0 97 13.5 98 12.0 99 8.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.029678006607033774 2 0.0038936160271618656 3 8.652480060359701E-5 4 0.0 5 0.0 6 1.7304960120719402E-4 7 0.0 8 0.0 9 0.0 10 8.652480060359701E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 7.787232054323731E-4 17 0.0 18 0.0 19 0.0 20 4.3262400301798506E-4 21 0.0 22 0.0 23 0.0 24 0.0013843968096575521 25 8.652480060359701E-5 26 3.4609920241438803E-4 27 2.59574401810791E-4 28 0.001211347208450358 29 3.4609920241438803E-4 30 0.001038297607243164 31 1.7304960120719402E-4 32 6.921984048287761E-4 33 2.59574401810791E-4 34 0.001038297607243164 35 1.7304960120719402E-4 36 1.7304960120719402E-4 37 0.0017304960120719402 38 0.0 39 4.3262400301798506E-4 40 0.0 41 0.0013843968096575521 42 0.005970211241648194 43 0.00432624003017985 44 0.004672339232594238 45 0.0022496448156935226 46 0.0025957440181079102 47 0.001038297607243164 48 0.003980140827765462 49 0.0029418432205222983 50 0.001211347208450358 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1155738.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.734180575484764 #Duplication Level Percentage of deduplicated Percentage of total 1 78.98693365540647 47.972066917312915 2 13.403174358105618 16.280616234997876 3 3.70953916589078 6.758874646591314 4 1.407212703543179 3.4186364178043016 5 0.7115624548444818 2.160808131162999 6 0.41107337556620754 1.497972277284727 7 0.26624611370813417 1.131916768322961 8 0.17508655697970787 0.8506990854356385 9 0.1319527219222924 0.721263639658971 >10 0.6803479879309394 7.432995603655561 >50 0.05810022701564907 2.50523535064927 >100 0.052893616474928684 6.514654947613328 >500 0.004873661678007516 2.050655682187411 >1k 0.0010034009337074297 0.7036042973228043 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1305 0.11291486478769411 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1211 0.10478153353095597 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1204 0.10417585992673078 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1197 0.10357018632250563 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.652480060359701E-5 2 0.0 0.0 0.0 0.0 8.652480060359701E-5 3 0.0 0.0 0.0 0.0 8.652480060359701E-5 4 0.0 0.0 0.0 0.0 8.652480060359701E-5 5 0.0 0.0 0.0 0.0 8.652480060359701E-5 6 0.0 0.0 0.0 0.0 8.652480060359701E-5 7 0.0 0.0 0.0 0.0 8.652480060359701E-5 8 0.0 0.0 0.0 0.0 8.652480060359701E-5 9 0.0 0.0 0.0 0.0 8.652480060359701E-5 10 0.0 0.0 0.0 0.0 8.652480060359701E-5 11 0.0 0.0 0.0 0.0 2.59574401810791E-4 12 0.0 0.0 0.0 0.0 5.19148803621582E-4 13 0.0 0.0 0.0 0.0 5.19148803621582E-4 14 0.0 0.0 0.0 0.0 5.19148803621582E-4 15 0.0 0.0 0.0 0.0 5.19148803621582E-4 16 0.0 0.0 0.0 0.0 5.19148803621582E-4 17 0.0 0.0 0.0 0.0 5.19148803621582E-4 18 0.0 0.0 0.0 8.652480060359701E-5 5.19148803621582E-4 19 0.0 0.0 0.0 8.652480060359701E-5 5.19148803621582E-4 20 0.0 0.0 0.0 2.59574401810791E-4 5.19148803621582E-4 21 0.0 0.0 0.0 3.4609920241438803E-4 5.19148803621582E-4 22 0.0 0.0 0.0 3.4609920241438803E-4 5.19148803621582E-4 23 0.0 0.0 0.0 6.05673604225179E-4 5.19148803621582E-4 24 0.0 0.0 0.0 0.001124822407846761 5.19148803621582E-4 25 0.0 0.0 0.0 0.0012978720090539551 5.19148803621582E-4 26 0.0 0.0 0.0 0.0018170208126755372 6.05673604225179E-4 27 0.0 0.0 0.0 0.002422694416900716 6.05673604225179E-4 28 0.0 0.0 0.0 0.0033744672235402834 6.05673604225179E-4 29 0.0 0.0 0.0 0.004758864033197836 6.05673604225179E-4 30 0.0 0.0 0.0 0.007268083250702149 6.05673604225179E-4 31 0.0 0.0 0.0 0.013065244891143149 6.05673604225179E-4 32 0.0 0.0 0.0 0.018948931332187745 6.05673604225179E-4 33 0.0 0.0 0.0 0.024226944169007163 6.05673604225179E-4 34 0.0 0.0 0.0 0.030197155410655357 6.05673604225179E-4 35 0.0 0.0 0.0 0.03850353626860067 6.05673604225179E-4 36 0.0 0.0 0.0 0.05122268195732943 6.05673604225179E-4 37 0.0 0.0 0.0 0.06939289008408481 6.05673604225179E-4 38 0.0 0.0 0.0 0.09059146623196607 6.05673604225179E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1710 0.0 24.448605 1 GGTATCA 835 0.0 23.980127 1 TGCGAAG 50 0.002581062 21.998983 2 CTCGCGC 55 0.0044846945 19.999075 30 CGCAATA 265 0.0 19.925331 36 GTATATA 235 0.0 19.66292 1 TGTACCG 105 1.7933417E-6 18.856272 5 TCTAGCG 295 0.0 18.643206 28 CTAGCGG 290 0.0 18.206057 29 TAGCGGC 325 0.0 17.599188 30 CTAACAC 140 8.375537E-8 17.284914 3 CAATACG 320 0.0 17.188936 38 GTATAGA 155 1.4357283E-8 17.035154 1 CGCCGGT 300 0.0 16.865887 7 TATCAAC 2540 0.0 16.455933 2 CGGTCCA 335 0.0 16.41715 10 TCAACGC 2525 0.0 16.37944 4 ATCAACG 2540 0.0 16.369322 3 AACGCAG 2545 0.0 16.250723 6 GCACCGT 95 3.3473334E-4 16.209776 6 >>END_MODULE