##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062173_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 753139 Sequences flagged as poor quality 0 Sequence length 50 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.23485306165263 32.0 32.0 32.0 32.0 32.0 2 31.4854628428484 32.0 32.0 32.0 32.0 32.0 3 31.604119558275432 32.0 32.0 32.0 32.0 32.0 4 31.680940702845025 32.0 32.0 32.0 32.0 32.0 5 31.670592015550913 32.0 32.0 32.0 32.0 32.0 6 35.323136897704146 36.0 36.0 36.0 36.0 36.0 7 35.337073236148974 36.0 36.0 36.0 36.0 36.0 8 35.2936483172429 36.0 36.0 36.0 36.0 36.0 9 35.36088291802709 36.0 36.0 36.0 36.0 36.0 10 35.26051100792815 36.0 36.0 36.0 36.0 36.0 11 35.35967596950895 36.0 36.0 36.0 36.0 36.0 12 35.30813037168438 36.0 36.0 36.0 36.0 36.0 13 35.31763193779634 36.0 36.0 36.0 36.0 36.0 14 35.293022934677396 36.0 36.0 36.0 36.0 36.0 15 35.26677412801621 36.0 36.0 36.0 36.0 36.0 16 35.28431272314938 36.0 36.0 36.0 36.0 36.0 17 35.27507272893848 36.0 36.0 36.0 36.0 36.0 18 35.26038354141799 36.0 36.0 36.0 36.0 36.0 19 35.23441356774779 36.0 36.0 36.0 36.0 36.0 20 35.218231959837425 36.0 36.0 36.0 36.0 36.0 21 35.204458937858746 36.0 36.0 36.0 36.0 36.0 22 35.16858906523231 36.0 36.0 36.0 36.0 36.0 23 35.15550250352192 36.0 36.0 36.0 36.0 36.0 24 35.13853883546065 36.0 36.0 36.0 36.0 36.0 25 35.10998899273574 36.0 36.0 36.0 36.0 36.0 26 35.083469319740445 36.0 36.0 36.0 36.0 36.0 27 35.03849355829402 36.0 36.0 36.0 36.0 36.0 28 34.99515760038984 36.0 36.0 36.0 36.0 36.0 29 34.96023443215661 36.0 36.0 36.0 36.0 36.0 30 34.912314990991035 36.0 36.0 36.0 36.0 36.0 31 34.91441951618493 36.0 36.0 36.0 36.0 36.0 32 34.8830693935648 36.0 36.0 36.0 36.0 36.0 33 34.88548727392951 36.0 36.0 36.0 36.0 36.0 34 34.86430393327128 36.0 36.0 36.0 36.0 36.0 35 34.84719553760992 36.0 36.0 36.0 36.0 36.0 36 34.7864696955011 36.0 36.0 36.0 32.0 36.0 37 34.7121553922981 36.0 36.0 36.0 32.0 36.0 38 34.694510575073124 36.0 36.0 36.0 32.0 36.0 39 34.56340463048654 36.0 36.0 36.0 32.0 36.0 40 34.609661695915364 36.0 36.0 36.0 32.0 36.0 41 34.594556914460675 36.0 36.0 36.0 32.0 36.0 42 34.575455526801825 36.0 36.0 36.0 32.0 36.0 43 34.58172794132292 36.0 36.0 36.0 32.0 36.0 44 34.489350571408465 36.0 36.0 36.0 32.0 36.0 45 34.46072504544314 36.0 36.0 36.0 32.0 36.0 46 34.34108312011461 36.0 36.0 36.0 32.0 36.0 47 34.33797081282472 36.0 36.0 36.0 32.0 36.0 48 34.30684375659739 36.0 36.0 36.0 32.0 36.0 49 34.248137462009005 36.0 36.0 36.0 32.0 36.0 50 33.90256645851563 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 0.0 19 3.0 20 6.0 21 22.0 22 48.0 23 131.0 24 390.0 25 865.0 26 1954.0 27 3944.0 28 6702.0 29 10635.0 30 15510.0 31 22286.0 32 32905.0 33 55595.0 34 123191.0 35 478951.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.16802278166947 18.32335838360655 11.792621990580248 26.715996844143735 2 14.393080316240384 20.451256011833784 41.22624147189343 23.9294222000324 3 19.032020777123922 24.63817955853923 29.00339380935183 27.326405854985026 4 11.868194317383644 16.693996725704018 37.75531475597466 33.682494200937676 5 12.755281561570971 38.34073125943551 35.19297234640618 13.711014832587345 6 32.577781436553295 36.927195088270906 17.60213294809968 12.892890527076121 7 28.61477097853119 30.749835023813667 21.72719776827385 18.908196229381296 8 25.19760628516117 37.611118266349244 19.76408073410088 17.427194714388712 9 26.801825426647667 14.538219372519547 19.200705314689586 39.45924988614319 10 14.975323280297529 28.342444090665868 33.97181662349181 22.710416005544793 11 35.72501224873496 20.76734839120003 25.207697383882653 18.299941976182353 12 24.90363664609056 23.299417504604065 31.68551887500183 20.111426974303548 13 30.373676041208856 21.221447833666826 25.249920665375182 23.15495545974913 14 21.313462720692993 21.646203423272464 26.717511641277376 30.322822214757174 15 22.925515741450116 31.716190504010548 22.550950090222386 22.807343664316946 16 22.51330103287981 26.656903060133814 28.087452880418834 22.742343026567543 17 21.82160265236563 27.995230628077948 27.681078791564374 22.502087927992044 18 21.826706163686023 26.369173204875075 30.525389139027826 21.278731492411076 19 24.92302217784499 25.063500894257235 26.580219587619286 23.433257340278487 20 24.761331920577636 26.444688755579985 27.43467996569022 21.35929935815216 21 23.70120256685685 25.369818851500188 26.155198442784133 24.773780138858832 22 24.132597037200306 27.72303651782739 26.31785102086069 21.826515424111616 23 22.267071549873265 27.71055542204029 27.402378578190746 22.619994449895703 24 24.279872000849785 25.96988567710754 27.80821372140268 21.942028600639997 25 23.312195108997287 26.79495656838455 27.819735559751336 22.07311276286683 26 21.526817901173096 27.795016829652052 28.451738400154024 22.226426869020827 27 22.231575704786387 27.548809245607696 27.544958679441695 22.67465637016422 28 21.961190985813758 27.768070065487223 26.543570514284497 23.72716843441452 29 22.866968518051333 26.512023156692738 26.30037310955612 24.320635215699813 30 22.224582769568237 26.773254231391768 27.37900018722091 23.623162811819086 31 24.283790889246507 25.704922908600352 27.021690752749848 22.989595449403293 32 22.686153368148084 27.467273202864316 27.222295250879995 22.624278178107602 33 21.99852085344366 27.610779977613635 28.34982214391273 22.040877025029975 34 22.59962397030003 27.440342463206978 28.08139874550544 21.878634820987557 35 22.166189994396778 27.769943888105498 28.01438780143878 22.04947831605894 36 21.89681293044957 27.297025640753276 28.417273351329175 22.38888807746798 37 22.3857330835304 27.000625392530075 26.62114092311124 23.99250060082828 38 22.828189749833697 28.30061914201761 26.49471080371618 22.376480304432516 39 23.898068333306778 26.364568229739277 26.912413760137667 22.82494967681628 40 24.58101968032419 26.266368182192373 27.436007743600776 21.716604393882662 41 24.178295911728387 25.726103063216176 28.101257419037886 21.99434360601755 42 23.080641027854092 28.05552494147547 27.328532750500262 21.535301280170177 43 21.838186086531618 27.9803004068452 28.017081124719827 22.164432381903357 44 21.833534058422288 27.97532342853501 27.164278989726505 23.026863523316198 45 22.0622953518819 28.106867147686565 27.205685134679374 22.625152365752164 46 22.588136567696292 26.345965654921322 27.260161381769993 23.805736395612392 47 24.091989430775563 26.588503976737083 26.82126591690678 22.49824067558058 48 22.32475999521982 27.117286983309214 26.60926026742441 23.948692754046554 49 23.5424556110878 26.644368198258967 26.639189713138478 23.173986477514752 50 22.49635189628365 28.765248011302152 25.926299674293052 22.81210041812115 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 358.0 1 209.5 2 61.0 3 205.5 4 350.0 5 312.0 6 274.0 7 217.0 8 160.0 9 226.0 10 292.0 11 423.0 12 554.0 13 986.5 14 1419.0 15 1833.5 16 2248.0 17 2254.5 18 2261.0 19 2227.5 20 2194.0 21 2594.5 22 2995.0 23 3597.5 24 4200.0 25 5484.5 26 6769.0 27 9574.5 28 12380.0 29 15607.5 30 18835.0 31 22768.5 32 26702.0 33 32578.0 34 38454.0 35 43824.5 36 49195.0 37 49239.0 38 49283.0 39 47247.5 40 45212.0 41 43572.0 42 41932.0 43 41962.0 44 41992.0 45 43129.0 46 44266.0 47 45283.5 48 46301.0 49 46793.0 50 47285.0 51 46733.5 52 46182.0 53 45220.5 54 44259.0 55 42834.0 56 41409.0 57 38770.5 58 36132.0 59 32965.0 60 29798.0 61 26016.0 62 22234.0 63 19064.0 64 15894.0 65 13425.5 66 10957.0 67 9105.5 68 7254.0 69 6007.0 70 4760.0 71 3916.0 72 3072.0 73 2603.0 74 2134.0 75 1695.0 76 1256.0 77 1016.5 78 777.0 79 635.0 80 493.0 81 388.0 82 283.0 83 212.0 84 141.0 85 106.5 86 72.0 87 52.0 88 32.0 89 20.0 90 8.0 91 7.0 92 6.0 93 4.5 94 3.0 95 4.0 96 5.0 97 4.5 98 4.0 99 3.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.033592736533362366 2 0.005443882205011292 3 3.98332844269119E-4 4 0.0 5 0.0 6 3.98332844269119E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 2.65555229512746E-4 17 0.0 18 2.65555229512746E-4 19 0.0 20 1.32777614756373E-4 21 0.0 22 0.0 23 0.0 24 0.001194998532807357 25 1.32777614756373E-4 26 5.31110459025492E-4 27 3.98332844269119E-4 28 0.001991664221345595 29 0.001194998532807357 30 0.002389997065614714 31 9.29443303294611E-4 32 0.00132777614756373 33 2.65555229512746E-4 34 9.29443303294611E-4 35 1.32777614756373E-4 36 2.65555229512746E-4 37 0.001593331377076476 38 0.0 39 9.29443303294611E-4 40 1.32777614756373E-4 41 0.001194998532807357 42 0.004779994131229428 43 0.0035849955984220707 44 0.004779994131229428 45 0.002257219450858341 46 0.002389997065614714 47 0.001194998532807357 48 0.0038505508279348165 49 0.003053885139396579 50 0.001062220918050984 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 753139.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 67.76451322163905 #Duplication Level Percentage of deduplicated Percentage of total 1 77.22986321321595 52.33444086817347 2 14.555877403703748 19.72743893551679 3 4.384780414124531 8.913975310407771 4 1.6970346857024996 4.599949175874684 5 0.790060371071618 2.6769028230687852 6 0.4017898138859754 1.6336254693237642 7 0.23796190903822692 1.128776105188718 8 0.1546005792579161 0.8381146397756889 9 0.10886507487452099 0.6639469925138283 >10 0.40625648548279 4.643270982412125 >50 0.021283551046194744 0.9764606045027926 >100 0.010641202109202564 1.382501044487897 >500 9.852964868346005E-4 0.48059704875361337 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 798 0.10595653657558565 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 782 0.10383209473948368 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 1.32777614756373E-4 11 0.0 0.0 0.0 0.0 1.32777614756373E-4 12 0.0 0.0 0.0 0.0 1.32777614756373E-4 13 0.0 0.0 0.0 0.0 1.32777614756373E-4 14 0.0 0.0 0.0 0.0 3.9833284426911897E-4 15 0.0 0.0 0.0 0.0 3.9833284426911897E-4 16 0.0 0.0 0.0 0.0 5.31110459025492E-4 17 0.0 0.0 0.0 1.32777614756373E-4 5.31110459025492E-4 18 0.0 0.0 0.0 1.32777614756373E-4 5.31110459025492E-4 19 0.0 0.0 0.0 1.32777614756373E-4 7.966656885382379E-4 20 0.0 0.0 0.0 3.9833284426911897E-4 7.966656885382379E-4 21 0.0 0.0 0.0 5.31110459025492E-4 0.001062220918050984 22 0.0 0.0 0.0 7.966656885382379E-4 0.00132777614756373 23 0.0 0.0 0.0 0.001194998532807357 0.00132777614756373 24 0.0 0.0 0.0 0.001858886606589222 0.00132777614756373 25 0.0 0.0 0.0 0.002522774680371087 0.00132777614756373 26 0.0 0.0 0.0 0.0035849955984220707 0.00132777614756373 27 0.0 0.0 0.0 0.004912771745985801 0.00132777614756373 28 0.0 0.0 0.0 0.006904435967331396 0.00132777614756373 29 0.0 0.0 0.0 0.008763322573920618 0.00132777614756373 30 0.0 0.0 0.0 0.013676094319906419 0.00132777614756373 31 0.0 0.0 0.0 0.02124441836101968 0.00132777614756373 32 0.0 0.0 0.0 0.027219411025056463 0.00132777614756373 33 0.0 0.0 0.0 0.03372551414811874 0.001460553762320103 34 0.0 0.0 0.0 0.04222328149252661 0.001460553762320103 35 0.0 0.0 0.0 0.05098660406644723 0.001460553762320103 36 0.0 0.0 0.0 0.05988270425512422 0.001460553762320103 37 0.0 0.0 0.0 0.07674546132918358 0.001460553762320103 38 0.0 0.0 0.0 0.10104376482959984 0.001460553762320103 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTCGCG 25 0.0023526843 35.19862 9 GTCCGGT 30 0.005735443 29.341923 1 TACCGTC 60 2.9438888E-7 29.332182 7 CGATGCG 40 7.028539E-4 27.500746 44 TAGGACC 855 0.0 24.186186 4 GTATCAA 965 0.0 22.576555 1 TGTAGGA 1800 0.0 22.122822 2 ATACCGT 80 3.613779E-6 21.999136 6 GTAGGAC 1695 0.0 21.934242 3 GTCCTAC 1520 0.0 21.716885 1 TTAGGAC 820 0.0 21.19429 3 TCCTACA 1645 0.0 20.997532 2 GGACCTG 1115 0.0 20.913979 6 CTGTAGG 1845 0.0 20.634768 1 GACGTGA 760 0.0 20.551826 7 CCTACAG 1640 0.0 20.523586 3 AGGACCT 1185 0.0 20.421139 5 CGTCGTA 65 4.9310934E-4 20.306896 10 GTCCTAT 120 1.4244506E-8 20.172571 1 AGACCGC 55 0.004483088 19.999216 6 >>END_MODULE