##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062170_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2074425 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.924635983465297 32.0 32.0 32.0 32.0 32.0 2 31.299939019246295 32.0 32.0 32.0 32.0 32.0 3 31.47727972811743 32.0 32.0 32.0 32.0 32.0 4 31.59254106559649 32.0 32.0 32.0 32.0 32.0 5 31.518555744362896 32.0 32.0 32.0 32.0 32.0 6 35.1928259638213 36.0 36.0 36.0 36.0 36.0 7 35.199199296190514 36.0 36.0 36.0 36.0 36.0 8 35.13005242416573 36.0 36.0 36.0 36.0 36.0 9 35.25907420128469 36.0 36.0 36.0 36.0 36.0 10 35.09981271918724 36.0 36.0 36.0 36.0 36.0 11 35.277015076466974 36.0 36.0 36.0 36.0 36.0 12 35.17993468069465 36.0 36.0 36.0 36.0 36.0 13 35.227652482013085 36.0 36.0 36.0 36.0 36.0 14 35.17999879484677 36.0 36.0 36.0 36.0 36.0 15 35.144121865095144 36.0 36.0 36.0 36.0 36.0 16 35.1653947479422 36.0 36.0 36.0 36.0 36.0 17 35.1380208973571 36.0 36.0 36.0 36.0 36.0 18 35.14698289887559 36.0 36.0 36.0 36.0 36.0 19 35.14302710389626 36.0 36.0 36.0 36.0 36.0 20 35.14888607686467 36.0 36.0 36.0 36.0 36.0 21 35.13370596671367 36.0 36.0 36.0 36.0 36.0 22 35.120850838184076 36.0 36.0 36.0 36.0 36.0 23 35.08324379044795 36.0 36.0 36.0 36.0 36.0 24 35.066368752786914 36.0 36.0 36.0 36.0 36.0 25 35.05163792376201 36.0 36.0 36.0 36.0 36.0 26 35.00846162189522 36.0 36.0 36.0 36.0 36.0 27 34.994418694336986 36.0 36.0 36.0 36.0 36.0 28 34.96976559769575 36.0 36.0 36.0 36.0 36.0 29 34.951692637718885 36.0 36.0 36.0 36.0 36.0 30 34.937044241175265 36.0 36.0 36.0 32.0 36.0 31 34.93422080817576 36.0 36.0 36.0 32.0 36.0 32 34.90772382708462 36.0 36.0 36.0 32.0 36.0 33 34.8867903153886 36.0 36.0 36.0 32.0 36.0 34 34.87302457307447 36.0 36.0 36.0 32.0 36.0 35 34.86852742326187 36.0 36.0 36.0 32.0 36.0 36 34.84267977873387 36.0 36.0 36.0 32.0 36.0 37 34.834985116357544 36.0 36.0 36.0 32.0 36.0 38 34.815023440230426 36.0 36.0 36.0 32.0 36.0 39 34.80016100847223 36.0 36.0 36.0 32.0 36.0 40 34.788734227557036 36.0 36.0 36.0 32.0 36.0 41 34.76168094773251 36.0 36.0 36.0 32.0 36.0 42 34.72930185473083 36.0 36.0 36.0 32.0 36.0 43 34.72577268399677 36.0 36.0 36.0 32.0 36.0 44 34.6827834219121 36.0 36.0 36.0 32.0 36.0 45 34.66209768972125 36.0 36.0 36.0 32.0 36.0 46 34.648279402726054 36.0 36.0 36.0 32.0 36.0 47 34.61948539956855 36.0 36.0 36.0 32.0 36.0 48 34.594847246827435 36.0 36.0 36.0 32.0 36.0 49 34.57966520843125 36.0 36.0 36.0 32.0 36.0 50 34.1397842775709 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 7.0 20 24.0 21 47.0 22 140.0 23 321.0 24 926.0 25 2168.0 26 4580.0 27 8512.0 28 14960.0 29 24824.0 30 38770.0 31 60589.0 32 94802.0 33 168698.0 34 384848.0 35 1270209.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.38373999421352 18.231362715787444 12.417880219886198 25.967017070112835 2 16.42403433972961 19.407259782908426 36.91588424610911 27.252821631252854 3 18.758794631171426 22.77370193774739 28.409834271668355 30.057669159412832 4 12.946189908046806 15.635899104571147 34.84729503356352 36.57061595381853 5 15.100859274256722 36.25481760005785 32.719331863046385 15.924991262639043 6 35.58163940685136 34.46619562759922 16.029340235178875 13.922824730370548 7 31.384696964219 29.950853851067162 19.55283994359883 19.11160924111501 8 28.638008122732806 33.03874567651277 18.471383636429373 19.851862564325053 9 27.051785434518 14.39083119418634 18.325222652060212 40.23216071923545 10 16.6680485763759 26.38713204243684 30.606905820603696 26.337913560583566 11 37.51550429637128 21.124745411379056 21.505091772418865 19.854658519830796 12 24.599069428429292 23.371933606630083 28.092376486195686 23.936620478744945 13 29.63004205984791 19.12120226086747 25.033346590018922 26.2154090892657 14 23.74764091254203 19.100618243609674 24.721597551128628 32.43014329271967 15 25.51063547730094 26.77855309302578 21.72987695385468 25.9809344758186 16 26.147627518185896 25.772243674104928 22.981088598685893 25.099040209023286 17 24.505103823951217 25.972739433819008 24.553020716584115 24.96913602564566 18 25.20356243296335 25.0012895139617 25.340419634356508 24.454728418718442 19 25.846101931860638 24.982248092845005 24.983742482856695 24.187907492437663 20 26.142886273216742 24.192267810890662 24.562732986923088 25.10211292896951 21 26.776155694303576 24.0535686050682 24.404220159427386 24.766055541200835 22 26.23170276100606 23.93280065560336 24.8034033527363 25.03209323065428 23 24.90917960841178 24.001313135598124 25.25978295661832 25.829724299371776 24 25.041361197989982 24.63661921859152 24.927690213304228 25.39432937011427 25 25.163190271589297 24.219793590398083 25.111754182737435 25.505261955275188 26 25.04624195255048 24.908178932373705 25.207444026388163 24.838135088687654 27 25.450560108907656 24.624256056397506 24.69743320777201 25.22775062692283 28 25.182330269789503 24.42933963878625 25.179003998756265 25.209326092667983 29 25.00179568697681 24.705181942861 25.16140695087531 25.131615419286884 30 25.047748700589374 24.72539073911421 25.21526685762933 25.011593702667085 31 25.451537374669364 24.528818513960335 24.62720779324079 25.392436318129512 32 25.432991002734273 24.467462524247882 24.502219428386315 25.59732704463153 33 24.999590246517336 24.37527055781429 24.914313315831237 25.71082587983714 34 25.504517190197305 24.405264342759793 25.109850564666854 24.98036790237605 35 25.872931167714913 24.323726306016287 25.052942534753104 24.7503999915157 36 25.00085566044694 24.783445597590845 24.788459044716575 25.42723969724564 37 25.88009005056908 24.467626627586906 24.657176326534547 24.995106995309467 38 25.210166672692434 24.30895308338455 25.09085650240428 25.390023741518736 39 25.579972695824544 24.429523989494832 24.552402420353182 25.43810089432744 40 25.75999483229545 24.563709794824774 24.82542124987105 24.850874123008722 41 25.052147382700323 24.85035496857177 25.051279665678273 25.04621798304963 42 25.906742495496115 24.79119673377457 24.672603709840473 24.62945706088884 43 25.508752426676644 24.11977984312111 24.914249792343487 25.45721793785876 44 25.180719697061 24.60805700112566 24.769698386719664 25.441524915093684 45 25.362431672717438 24.801351336368118 24.71404860510868 25.12216838580576 46 25.158782306625447 24.570414017482804 24.854691592335257 25.41611208355649 47 25.290228779626666 24.62921772967386 24.992021781741016 25.088531708958456 48 25.877237807276682 25.106442879511288 24.16672772991276 24.849591583299265 49 25.270121672259606 25.02643005520302 24.37909256087349 25.324355711663888 50 25.34642563942617 25.127904515958598 24.3392423540505 25.18642749056474 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 94.0 1 77.0 2 60.0 3 153.5 4 247.0 5 276.0 6 305.0 7 242.5 8 180.0 9 260.5 10 341.0 11 614.5 12 888.0 13 1573.0 14 2258.0 15 2913.5 16 3569.0 17 3598.5 18 3628.0 19 3581.5 20 3535.0 21 4221.5 22 4908.0 23 6035.0 24 7162.0 25 9161.0 26 11160.0 27 13857.0 28 16554.0 29 19426.0 30 22298.0 31 25393.0 32 28488.0 33 32670.0 34 36852.0 35 42994.0 36 49136.0 37 58302.5 38 67469.0 39 75428.0 40 83387.0 41 92225.0 42 101063.0 43 107286.0 44 113509.0 45 123744.0 46 133979.0 47 144054.0 48 154129.0 49 159729.0 50 165329.0 51 163597.0 52 161865.0 53 160813.5 54 159762.0 55 160495.5 56 161229.0 57 154765.0 58 148301.0 59 135655.5 60 123010.0 61 107917.0 62 92824.0 63 79912.5 64 67001.0 65 56825.5 66 46650.0 67 40237.5 68 33825.0 69 29937.0 70 26049.0 71 20589.5 72 15130.0 73 13237.5 74 11345.0 75 8547.5 76 5750.0 77 5028.0 78 4306.0 79 3694.5 80 3083.0 81 2365.0 82 1647.0 83 1363.5 84 1080.0 85 832.5 86 585.0 87 404.5 88 224.0 89 150.0 90 76.0 91 64.0 92 52.0 93 42.0 94 32.0 95 31.5 96 31.0 97 28.0 98 25.0 99 20.0 100 15.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0301288308808465 2 0.004483170035069959 3 2.892367764561264E-4 4 0.0 5 0.0 6 1.928245176374176E-4 7 0.0 8 0.0 9 0.0 10 4.82061294093544E-5 11 0.0 12 4.82061294093544E-5 13 0.0 14 0.0 15 0.0 16 7.23091941140316E-4 17 0.0 18 0.0 19 0.0 20 2.892367764561264E-4 21 4.82061294093544E-5 22 0.0 23 4.82061294093544E-5 24 8.195041999590248E-4 25 2.892367764561264E-4 26 4.8206129409354405E-4 27 3.374429058654808E-4 28 0.001446183882280632 29 4.8206129409354405E-4 30 0.0011087409764151512 31 5.784735529122528E-4 32 8.195041999590248E-4 33 3.374429058654808E-4 34 7.712980705496704E-4 35 2.892367764561264E-4 36 1.928245176374176E-4 37 0.0016872145293274038 38 0.0 39 8.195041999590248E-4 40 1.446183882280632E-4 41 7.712980705496704E-4 42 0.0050134374585728576 43 0.004145727129204479 44 0.0038564903527483524 45 0.0016390083999180496 46 0.0021210696940115936 47 0.0013015654940525688 48 0.0035190474468828714 49 0.00395290261156706 50 0.0012533593646432144 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2074425.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.94263865566905 #Duplication Level Percentage of deduplicated Percentage of total 1 76.69916682242409 42.14054607915327 2 13.688086035972033 15.041191299242415 3 4.128255128064584 6.804516893389955 4 1.766757286595603 3.882812287587701 5 0.95999080487568 2.637221395252469 6 0.5876131087821522 1.9371008823091285 7 0.4062907131612585 1.5625878689661175 8 0.2733501578630693 1.201486315995257 9 0.2117226647044247 1.0469341675863524 >10 1.1394805734340703 11.209951613460408 >50 0.076852611672983 2.9335811417090345 >100 0.054588127145919506 5.977381867743056 >500 0.006082827033537847 2.2965319132370707 >1k 0.0017631382705906727 1.3281562743677715 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 9.64122588187088E-5 2 0.0 0.0 0.0 0.0 9.64122588187088E-5 3 0.0 0.0 0.0 0.0 9.64122588187088E-5 4 0.0 0.0 0.0 0.0 9.64122588187088E-5 5 0.0 0.0 0.0 0.0 9.64122588187088E-5 6 0.0 0.0 0.0 0.0 1.446183882280632E-4 7 0.0 0.0 0.0 0.0 1.446183882280632E-4 8 0.0 0.0 0.0 0.0 1.446183882280632E-4 9 0.0 0.0 0.0 0.0 1.446183882280632E-4 10 0.0 0.0 0.0 0.0 1.446183882280632E-4 11 0.0 0.0 0.0 0.0 1.446183882280632E-4 12 0.0 0.0 0.0 0.0 2.892367764561264E-4 13 0.0 0.0 0.0 0.0 3.374429058654808E-4 14 0.0 0.0 0.0 0.0 3.374429058654808E-4 15 0.0 0.0 0.0 0.0 4.338551646841896E-4 16 0.0 0.0 0.0 9.64122588187088E-5 4.338551646841896E-4 17 0.0 0.0 0.0 9.64122588187088E-5 4.338551646841896E-4 18 0.0 0.0 0.0 1.446183882280632E-4 4.338551646841896E-4 19 0.0 0.0 0.0 1.928245176374176E-4 4.338551646841896E-4 20 0.0 0.0 0.0 2.41030647046772E-4 4.338551646841896E-4 21 0.0 0.0 0.0 3.374429058654808E-4 4.338551646841896E-4 22 0.0 0.0 0.0 4.82061294093544E-4 4.338551646841896E-4 23 0.0 0.0 0.0 0.0010123287175964424 5.302674235028984E-4 24 0.0 0.0 0.0 0.0013015654940525688 5.302674235028984E-4 25 0.0 0.0 0.0 0.0016390083999180496 5.784735529122528E-4 26 0.0 0.0 0.0 0.002072863564602239 6.266796823216072E-4 27 0.0 0.0 0.0 0.0022174819528303024 6.266796823216072E-4 28 0.0 0.0 0.0 0.002940573893970618 6.266796823216072E-4 29 0.0 0.0 0.0 0.003904696482157706 6.748858117309616E-4 30 0.0 0.0 0.0 0.005736529399713174 6.748858117309616E-4 31 0.0 0.0 0.0 0.008628897164274438 6.748858117309616E-4 32 0.0 0.0 0.0 0.012919242681706978 6.748858117309616E-4 33 0.0 0.0 0.0 0.017788061752051772 6.748858117309616E-4 34 0.0 0.0 0.0 0.023042529857671402 7.23091941140316E-4 35 0.0 0.0 0.0 0.029212914422068765 7.23091941140316E-4 36 0.0 0.0 0.0 0.036636658351109345 7.23091941140316E-4 37 0.0 0.0 0.0 0.048157923279945045 7.23091941140316E-4 38 0.0 0.0 0.0 0.0644998011497162 7.23091941140316E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2500 0.0 25.615227 1 GGTATCA 1235 0.0 24.411747 1 ATACGAA 455 0.0 18.377039 40 TACGAAT 460 0.0 18.177288 41 ACCGTCG 535 0.0 17.681265 8 CGCAATA 485 0.0 17.237822 36 TCTAGCG 490 0.0 17.061104 28 CGAATGC 505 0.0 16.992027 43 TCAACGC 3785 0.0 16.796957 4 CCGTCGT 525 0.0 16.760979 9 CTAGCGG 505 0.0 16.553938 29 ATACCGT 600 0.0 16.499086 6 CGTCGTA 525 0.0 16.341953 10 CAACGCA 3905 0.0 16.280788 5 ATCAACG 3925 0.0 16.253878 3 TACCGTC 555 0.0 16.251354 7 TATACCG 95 3.349171E-4 16.20963 5 AACGCAG 3950 0.0 16.095312 6 CGTCTTA 165 3.1161107E-8 15.999114 15 TATCAAC 4075 0.0 15.817911 2 >>END_MODULE