Basic Statistics
Measure | Value |
---|---|
Filename | SRR4062168_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3496527 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 51 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 3840 | 0.0 | 26.878658 | 1 |
GGTATCA | 1610 | 0.0 | 26.791447 | 1 |
TATCAAC | 5600 | 0.0 | 18.38547 | 2 |
CGCTATA | 60 | 0.0074007395 | 18.339382 | 1 |
TCAACGC | 5625 | 0.0 | 18.186165 | 4 |
ATCAACG | 5645 | 0.0 | 18.12173 | 3 |
CAACGCA | 5830 | 0.0 | 17.65989 | 5 |
AACGCAG | 6055 | 0.0 | 17.039991 | 6 |
CTAATAC | 325 | 0.0 | 16.92261 | 3 |
GTACCGT | 340 | 0.0 | 16.823065 | 6 |
TATGCGA | 175 | 3.6343408E-9 | 16.342638 | 12 |
ATACCGT | 220 | 1.8189894E-11 | 15.9995575 | 6 |
GTATTAC | 350 | 0.0 | 15.719472 | 1 |
TACCGTA | 205 | 1.8153514E-9 | 15.023975 | 7 |
ACGCAGA | 7235 | 0.0 | 14.352057 | 7 |
AGAGTAC | 7480 | 0.0 | 13.8527565 | 11 |
TCGATCG | 160 | 6.346596E-6 | 13.7508 | 41 |
AATACCG | 130 | 2.3330332E-4 | 13.538088 | 5 |
CGCAGAG | 7700 | 0.0 | 13.513911 | 8 |
ACCGTAT | 245 | 1.537046E-9 | 13.469016 | 8 |