##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062168_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3496527 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.29398285784723 32.0 32.0 32.0 32.0 32.0 2 31.462419137618557 32.0 32.0 32.0 32.0 32.0 3 31.576496906787792 32.0 32.0 32.0 32.0 32.0 4 31.650962226231915 32.0 32.0 32.0 32.0 32.0 5 31.622311510822023 32.0 32.0 32.0 32.0 32.0 6 35.26534301036428 36.0 36.0 36.0 36.0 36.0 7 35.27849177197831 36.0 36.0 36.0 36.0 36.0 8 35.22485311853734 36.0 36.0 36.0 36.0 36.0 9 35.31226528495275 36.0 36.0 36.0 36.0 36.0 10 35.19733838749136 36.0 36.0 36.0 36.0 36.0 11 35.31089707014989 36.0 36.0 36.0 36.0 36.0 12 35.24598637447959 36.0 36.0 36.0 36.0 36.0 13 35.26854676082868 36.0 36.0 36.0 36.0 36.0 14 35.236068819145395 36.0 36.0 36.0 36.0 36.0 15 35.210854656635 36.0 36.0 36.0 36.0 36.0 16 35.22935415628136 36.0 36.0 36.0 36.0 36.0 17 35.21052490085162 36.0 36.0 36.0 36.0 36.0 18 35.20045519454018 36.0 36.0 36.0 36.0 36.0 19 35.20064767124635 36.0 36.0 36.0 36.0 36.0 20 35.20003363337392 36.0 36.0 36.0 36.0 36.0 21 35.19272180652402 36.0 36.0 36.0 36.0 36.0 22 35.174200285025684 36.0 36.0 36.0 36.0 36.0 23 35.14263067323662 36.0 36.0 36.0 36.0 36.0 24 35.13562343433927 36.0 36.0 36.0 36.0 36.0 25 35.12353601159093 36.0 36.0 36.0 36.0 36.0 26 35.08164358519182 36.0 36.0 36.0 36.0 36.0 27 35.064509440367544 36.0 36.0 36.0 36.0 36.0 28 35.05460990291223 36.0 36.0 36.0 36.0 36.0 29 35.03523095917749 36.0 36.0 36.0 36.0 36.0 30 35.01767325120041 36.0 36.0 36.0 36.0 36.0 31 35.01414946888727 36.0 36.0 36.0 36.0 36.0 32 34.98863071842431 36.0 36.0 36.0 36.0 36.0 33 34.963559554952674 36.0 36.0 36.0 36.0 36.0 34 34.957327084847336 36.0 36.0 36.0 36.0 36.0 35 34.9484903162481 36.0 36.0 36.0 36.0 36.0 36 34.92247135514755 36.0 36.0 36.0 36.0 36.0 37 34.91639418199831 36.0 36.0 36.0 36.0 36.0 38 34.911384067676295 36.0 36.0 36.0 36.0 36.0 39 34.89430426248675 36.0 36.0 36.0 36.0 36.0 40 34.88275423012607 36.0 36.0 36.0 32.0 36.0 41 34.85668321737541 36.0 36.0 36.0 32.0 36.0 42 34.83834130266976 36.0 36.0 36.0 32.0 36.0 43 34.82543792740625 36.0 36.0 36.0 32.0 36.0 44 34.79803673759705 36.0 36.0 36.0 32.0 36.0 45 34.77561391632325 36.0 36.0 36.0 32.0 36.0 46 34.75804076444998 36.0 36.0 36.0 32.0 36.0 47 34.73117582103613 36.0 36.0 36.0 32.0 36.0 48 34.71047585218132 36.0 36.0 36.0 32.0 36.0 49 34.690657043403355 36.0 36.0 36.0 32.0 36.0 50 34.280281833945516 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 6.0 20 23.0 21 79.0 22 217.0 23 635.0 24 1573.0 25 3804.0 26 8035.0 27 15126.0 28 25893.0 29 41707.0 30 62726.0 31 92857.0 32 141798.0 33 239623.0 34 547855.0 35 2314570.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.466292175012626 16.73036457863967 12.341030581577813 26.46231266476989 2 16.45080976725895 18.498244610489436 37.07056594329842 27.9803796789532 3 19.38513150217931 21.570246988434214 27.588945580176862 31.455675929209615 4 13.284557300589213 14.874278069146346 33.43347082218179 38.40769380808265 5 15.325778980113697 35.70236980867015 32.88019797930918 16.091653231906974 6 37.12335776047105 33.087517563887076 15.475639928946517 14.313484746695357 7 32.180875480155024 29.30044584240305 18.723436141062262 19.79524253637967 8 28.82300065178962 33.39439392288405 17.71025935163664 20.072346073689694 9 27.023758146297737 14.71957745500035 17.601179684870157 40.655484713831754 10 16.335356865643213 27.119575258413636 30.842441898043944 25.702625977899206 11 37.518743599005525 21.13551532706597 21.144038069776094 20.201703004152407 12 24.918962421557854 22.800917253296557 28.144993058824674 24.135127266320914 13 30.199051801973788 19.407343343838043 24.19217698018634 26.20142787400183 14 23.61454666301733 18.475704606313638 24.79117135374616 33.11857737692287 15 25.571660107300758 26.550545727231622 21.62946260675236 26.24833155871526 16 25.956340415260264 25.716672586862426 22.87903981860749 25.44794717926982 17 24.748500440580038 25.50548015216242 24.554221946520073 25.19179746073747 18 25.04262091226055 25.31517739194051 24.943865663117332 24.69833603268161 19 26.009666163024054 24.671280959649387 24.811563016673404 24.507489860653155 20 26.163972271843015 24.397614998692983 24.745446755886856 24.69296597357714 21 26.019740736948616 24.10472566198564 24.723168081690226 25.15236551937552 22 26.06120301659332 23.827758229809177 24.71681185359072 25.394226900006778 23 25.436933687894786 24.095602320703463 24.875290502630325 25.592173488771426 24 25.296653626967753 24.21005336190284 24.864421641972463 25.628871369156947 25 25.57771727317447 24.009586674750896 24.977606305698238 25.4350897463764 26 25.3117395984794 24.34380244518245 24.98881741440317 25.35564054193498 27 25.42199924438962 24.478458669227695 24.654891690602433 25.44465039578025 28 25.622842466830832 24.171063958792725 24.76823767971697 25.43785589465947 29 25.333697124760725 24.702782117820945 24.69377313200109 25.26974762541724 30 25.570686276416478 24.479335288054425 24.60237289260207 25.347605542927027 31 25.412810923788136 24.326729807614207 24.769170225447272 25.491289043150385 32 25.503102527553235 24.499814672026687 24.577520860836994 25.41956193958308 33 25.41506257219676 24.42922550729711 24.565360825803705 25.590351094702417 34 25.590246715004472 24.405148685658588 24.61864765491474 25.3859569444222 35 25.423592600642923 24.45359957900999 24.958615995332504 25.164191825014587 36 25.530784894695298 24.45480077334035 24.75301156578541 25.261402766178943 37 25.645642004060655 24.211943379643706 24.645522169289638 25.496892447006005 38 25.465755019194763 24.43567574338765 24.722331616486873 25.376237620930713 39 25.625717323031243 24.42417532697632 24.474339676711644 25.475767673280792 40 25.6773012283056 24.443304264463794 24.538341507165402 25.341053000065205 41 25.356364015964562 24.393342475822216 24.77220759646446 25.478085911748767 42 25.568862069932035 24.27526180039504 24.63309047164971 25.522785658023217 43 25.550553570968916 24.231021138946172 24.626314570170948 25.59211071991397 44 25.34277389807405 24.405267015997307 24.7649511597783 25.487007926150344 45 25.308661924922415 24.415444979683755 24.766313843446934 25.509579251946896 46 25.65728679059974 24.39975666796417 24.48984786599692 25.453108675439168 47 25.518984604850974 24.581158653061024 24.653059310033974 25.246797432054024 48 25.465987376133057 24.690817079201338 24.46172383939677 25.381471705268833 49 25.492507141639564 24.49419344948341 24.33648820099325 25.676811207883777 50 25.307166415556694 24.792705569836603 24.55715411745998 25.342973897146727 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 90.0 1 95.0 2 100.0 3 295.5 4 491.0 5 542.5 6 594.0 7 478.5 8 363.0 9 488.5 10 614.0 11 1102.0 12 1590.0 13 2933.5 14 4277.0 15 5557.5 16 6838.0 17 6412.5 18 5987.0 19 5403.0 20 4819.0 21 5584.0 22 6349.0 23 8047.0 24 9745.0 25 12486.0 26 15227.0 27 18371.5 28 21516.0 29 25780.5 30 30045.0 31 36605.0 32 43165.0 33 50276.0 34 57387.0 35 67140.0 36 76893.0 37 87329.0 38 97765.0 39 110972.0 40 124179.0 41 139340.5 42 154502.0 43 168579.0 44 182656.0 45 200657.0 46 218658.0 47 231531.0 48 244404.0 49 259337.0 50 274270.0 51 285686.5 52 297103.0 53 300612.5 54 304122.0 55 297557.5 56 290993.0 57 279015.0 58 267037.0 59 248566.5 60 230096.0 61 202479.5 62 174863.0 63 151181.5 64 127500.0 65 107172.5 66 86845.0 67 70680.0 68 54515.0 69 43834.5 70 33154.0 71 25957.5 72 18761.0 73 15568.0 74 12375.0 75 9826.0 76 7277.0 77 5844.5 78 4412.0 79 3491.5 80 2571.0 81 1932.0 82 1293.0 83 938.0 84 583.0 85 419.5 86 256.0 87 179.5 88 103.0 89 71.0 90 39.0 91 33.0 92 27.0 93 28.0 94 29.0 95 24.0 96 19.0 97 21.5 98 24.0 99 15.0 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.032088984297847546 2 0.004347170778318028 3 2.0019865426464602E-4 4 2.859980775209229E-5 5 0.0 6 1.7159884651255373E-4 7 0.0 8 0.0 9 0.0 10 2.859980775209229E-5 11 0.0 12 2.859980775209229E-5 13 0.0 14 0.0 15 0.0 16 6.005959627939381E-4 17 0.0 18 1.1439923100836916E-4 19 0.0 20 2.5739826976883064E-4 21 2.859980775209229E-5 22 0.0 23 2.859980775209229E-5 24 7.149951938023073E-4 25 2.0019865426464602E-4 26 5.433963472897535E-4 27 4.5759692403347663E-4 28 0.0016301890418692604 29 5.147965395376613E-4 30 0.0010009932713232303 31 3.145978852730152E-4 32 6.577955782981227E-4 33 1.7159884651255373E-4 34 6.577955782981227E-4 35 2.0019865426464602E-4 36 2.0019865426464602E-4 37 0.0013155911565962454 38 0.0 39 5.719961550418458E-4 40 8.579942325627687E-5 41 9.151938480669533E-4 42 0.0046045690480868585 43 0.003918173662036644 44 0.0036035757767636286 45 0.0018303876961339065 46 0.0020019865426464606 47 0.0010295930790753225 48 0.003832374238780367 49 0.00374657481552409 50 0.0014585901953567068 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 3496527.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.18422526188761 #Duplication Level Percentage of deduplicated Percentage of total 1 63.0976812041089 26.617267974169017 2 16.76653500722726 14.145665792123985 3 7.27521782940254 9.206982832344533 4 3.8608461718898077 6.514672184659845 5 2.3472244882550624 4.950792327638521 6 1.4784695528061922 3.742085559505119 7 1.0133950519915083 2.9924499606744464 8 0.7191089790016624 2.4268044126441706 9 0.5325891654515051 2.0220175194702326 >10 2.72494029778287 20.275305849015034 >50 0.13801690780686876 3.934631989354857 >100 0.0456343133630248 2.975528440143223 >500 1.3641236657002212E-4 0.03366353242499674 >1k 2.0461854617606818E-4 0.16213162583203194 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.0019865426464602E-4 2 0.0 0.0 0.0 0.0 2.0019865426464602E-4 3 0.0 0.0 0.0 0.0 2.0019865426464602E-4 4 0.0 0.0 0.0 0.0 2.0019865426464602E-4 5 2.859980775209229E-5 0.0 0.0 0.0 2.2879846201673832E-4 6 2.859980775209229E-5 0.0 0.0 0.0 3.1459788527301517E-4 7 2.859980775209229E-5 0.0 0.0 0.0 3.1459788527301517E-4 8 2.859980775209229E-5 0.0 0.0 0.0 3.1459788527301517E-4 9 2.859980775209229E-5 0.0 0.0 0.0 3.1459788527301517E-4 10 2.859980775209229E-5 0.0 2.859980775209229E-5 0.0 3.1459788527301517E-4 11 2.859980775209229E-5 0.0 2.859980775209229E-5 0.0 3.1459788527301517E-4 12 2.859980775209229E-5 0.0 2.859980775209229E-5 0.0 0.0011153925023315993 13 2.859980775209229E-5 0.0 2.859980775209229E-5 0.0 0.0012869913488441531 14 2.859980775209229E-5 0.0 2.859980775209229E-5 0.0 0.0012869913488441531 15 2.859980775209229E-5 0.0 2.859980775209229E-5 8.579942325627687E-5 0.0017445882728776298 16 2.859980775209229E-5 0.0 2.859980775209229E-5 1.1439923100836916E-4 0.0018303876961339065 17 2.859980775209229E-5 0.0 2.859980775209229E-5 2.2879846201673832E-4 0.0018303876961339065 18 2.859980775209229E-5 0.0 2.859980775209229E-5 3.1459788527301517E-4 0.0019161871193901835 19 2.859980775209229E-5 0.0 2.859980775209229E-5 4.2899711628138434E-4 0.0019161871193901835 20 2.859980775209229E-5 0.0 2.859980775209229E-5 6.005959627939381E-4 0.0021163857736548296 21 2.859980775209229E-5 0.0 2.859980775209229E-5 7.721948093064919E-4 0.0022307850046631985 22 2.859980775209229E-5 0.0 2.859980775209229E-5 9.151938480669533E-4 0.0024023838511757524 23 2.859980775209229E-5 0.0 2.859980775209229E-5 0.0013727907721004298 0.0024023838511757524 24 2.859980775209229E-5 0.0 2.859980775209229E-5 0.001973386734894368 0.0024023838511757524 25 2.859980775209229E-5 0.0 2.859980775209229E-5 0.002659782120944583 0.0024023838511757524 26 2.859980775209229E-5 0.0 2.859980775209229E-5 0.003546376161259444 0.002545382889936214 27 2.859980775209229E-5 0.0 2.859980775209229E-5 0.0044901698170784895 0.002774181351952952 28 2.859980775209229E-5 0.0 2.859980775209229E-5 0.005462563280649628 0.0028027811597050446 29 2.859980775209229E-5 0.0 2.859980775209229E-5 0.007207151553527257 0.0028027811597050446 30 2.859980775209229E-5 0.0 2.859980775209229E-5 0.00986693367447184 0.0028027811597050446 31 2.859980775209229E-5 0.0 2.859980775209229E-5 0.01435710349155033 0.002859980775209229 32 2.859980775209229E-5 0.0 2.859980775209229E-5 0.02013426465747297 0.0030029798139696905 33 2.859980775209229E-5 0.0 2.859980775209229E-5 0.026226023708668632 0.003031579621721783 34 2.859980775209229E-5 0.0 2.859980775209229E-5 0.03223198333660801 0.0033175776992427058 35 2.859980775209229E-5 0.0 2.859980775209229E-5 0.03943913489013527 0.0033175776992427058 36 2.859980775209229E-5 0.0 2.859980775209229E-5 0.049334668372359204 0.0033175776992427058 37 2.859980775209229E-5 0.0 2.859980775209229E-5 0.0645211662887202 0.0033175776992427058 38 2.859980775209229E-5 0.0 2.859980775209229E-5 0.08248184555703417 0.003346177506994798 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3840 0.0 26.878658 1 GGTATCA 1610 0.0 26.791447 1 TATCAAC 5600 0.0 18.38547 2 CGCTATA 60 0.0074007395 18.339382 1 TCAACGC 5625 0.0 18.186165 4 ATCAACG 5645 0.0 18.12173 3 CAACGCA 5830 0.0 17.65989 5 AACGCAG 6055 0.0 17.039991 6 CTAATAC 325 0.0 16.92261 3 GTACCGT 340 0.0 16.823065 6 TATGCGA 175 3.6343408E-9 16.342638 12 ATACCGT 220 1.8189894E-11 15.9995575 6 GTATTAC 350 0.0 15.719472 1 TACCGTA 205 1.8153514E-9 15.023975 7 ACGCAGA 7235 0.0 14.352057 7 AGAGTAC 7480 0.0 13.8527565 11 TCGATCG 160 6.346596E-6 13.7508 41 AATACCG 130 2.3330332E-4 13.538088 5 CGCAGAG 7700 0.0 13.513911 8 ACCGTAT 245 1.537046E-9 13.469016 8 >>END_MODULE