##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062165_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2320374 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.297333964266105 32.0 32.0 32.0 32.0 32.0 2 31.482168822784605 32.0 32.0 32.0 32.0 32.0 3 31.584192031112227 32.0 32.0 32.0 32.0 32.0 4 31.66225099919237 32.0 32.0 32.0 32.0 32.0 5 31.638517325224296 32.0 32.0 32.0 32.0 32.0 6 35.29070917015964 36.0 36.0 36.0 36.0 36.0 7 35.292154195832225 36.0 36.0 36.0 36.0 36.0 8 35.24915509310137 36.0 36.0 36.0 36.0 36.0 9 35.32676585757296 36.0 36.0 36.0 36.0 36.0 10 35.21652026785337 36.0 36.0 36.0 36.0 36.0 11 35.330373896621836 36.0 36.0 36.0 36.0 36.0 12 35.260902768260635 36.0 36.0 36.0 36.0 36.0 13 35.28501224371588 36.0 36.0 36.0 36.0 36.0 14 35.255790230368035 36.0 36.0 36.0 36.0 36.0 15 35.24048580099588 36.0 36.0 36.0 36.0 36.0 16 35.250240693957096 36.0 36.0 36.0 36.0 36.0 17 35.236210197149255 36.0 36.0 36.0 36.0 36.0 18 35.22806926814384 36.0 36.0 36.0 36.0 36.0 19 35.22266151922061 36.0 36.0 36.0 36.0 36.0 20 35.22229907764869 36.0 36.0 36.0 36.0 36.0 21 35.21493216179805 36.0 36.0 36.0 36.0 36.0 22 35.19838181258711 36.0 36.0 36.0 36.0 36.0 23 35.17427621581693 36.0 36.0 36.0 36.0 36.0 24 35.16020865601838 36.0 36.0 36.0 36.0 36.0 25 35.151165717250755 36.0 36.0 36.0 36.0 36.0 26 35.10818557698026 36.0 36.0 36.0 36.0 36.0 27 35.095967288032014 36.0 36.0 36.0 36.0 36.0 28 35.08124767817602 36.0 36.0 36.0 36.0 36.0 29 35.06550323353046 36.0 36.0 36.0 36.0 36.0 30 35.04454669807539 36.0 36.0 36.0 36.0 36.0 31 35.04340550273361 36.0 36.0 36.0 36.0 36.0 32 35.022579549676045 36.0 36.0 36.0 36.0 36.0 33 35.00154328569446 36.0 36.0 36.0 36.0 36.0 34 34.994407367088236 36.0 36.0 36.0 36.0 36.0 35 34.98574798717793 36.0 36.0 36.0 36.0 36.0 36 34.965530556711975 36.0 36.0 36.0 36.0 36.0 37 34.94925947282636 36.0 36.0 36.0 36.0 36.0 38 34.94710637164526 36.0 36.0 36.0 36.0 36.0 39 34.92707468709786 36.0 36.0 36.0 36.0 36.0 40 34.921481192256074 36.0 36.0 36.0 36.0 36.0 41 34.893623183159264 36.0 36.0 36.0 36.0 36.0 42 34.87537396988589 36.0 36.0 36.0 36.0 36.0 43 34.85458206306397 36.0 36.0 36.0 32.0 36.0 44 34.82794368494044 36.0 36.0 36.0 32.0 36.0 45 34.81123689543151 36.0 36.0 36.0 32.0 36.0 46 34.79299888724835 36.0 36.0 36.0 32.0 36.0 47 34.766231650587365 36.0 36.0 36.0 32.0 36.0 48 34.74797855862891 36.0 36.0 36.0 32.0 36.0 49 34.72910013644352 36.0 36.0 36.0 32.0 36.0 50 34.32779500201261 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 3.0 20 16.0 21 59.0 22 161.0 23 458.0 24 1018.0 25 2362.0 26 5048.0 27 9563.0 28 16921.0 29 27014.0 30 40583.0 31 59505.0 32 90769.0 33 152826.0 34 352554.0 35 1561513.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.5310536446781 16.989500412784018 12.059199479223922 26.42024646331396 2 16.37261413184719 19.173400417277765 37.04777489929004 27.406210551585 3 18.97303314518781 22.226527096791155 28.205107209333697 30.59533254868734 4 13.29019084431684 15.390111848396787 34.27737695620488 37.042320351081486 5 14.983705213038935 35.96088389199327 33.22753142381357 15.827879471154219 6 35.807334258185435 33.883245394809705 16.04394297291252 14.265477374092333 7 31.46182468860623 29.724087582432833 19.454794787392032 19.359292941568903 8 28.4602826958068 33.35044264415995 18.355446147905464 19.833828512127784 9 27.179066822848384 14.679012952222356 17.984040503815333 40.15787972111393 10 16.234896818268794 26.956625920326566 31.351524669320263 25.456952592084374 11 37.055578109390986 21.271700165576757 21.689951706061176 19.98277001897108 12 24.64964699656176 22.97750276464053 28.637926472198018 23.734923766599696 13 29.992190914050926 19.544047640595867 24.68744262778328 25.776318817569926 14 23.61485691530762 18.56187838684626 25.14327431698511 32.67999038086102 15 25.27359813547299 26.679147413304925 22.074803458408 25.97245099281409 16 25.757468668654866 25.833965419159092 23.173990242893343 25.234575669292695 17 24.471270579656558 25.842989104342664 24.881980232497003 24.803760083503782 18 24.860054586145566 25.417681411878885 25.314206490433204 24.408057511542346 19 25.668706855015618 24.77725573549781 25.313419302233175 24.2406181072534 20 25.88146616461965 24.53620483311476 25.175801931332416 24.406527070933176 21 25.808942868692718 24.27475053590499 25.04660886563976 24.869697729762528 22 25.82342329296915 24.093357363942193 24.93990192960273 25.143317413485928 23 25.231762307180784 24.266184790117794 25.030329175524795 25.47172372717662 24 24.959952214167412 24.35495806026066 25.230859270119677 25.454230455452254 25 25.38158768576232 24.187985455774097 25.26333073461097 25.167096123852605 26 25.114906788130632 24.444665674578804 25.189679700425664 25.2507478368649 27 25.084221590808696 24.84512148293783 24.927608434355427 25.14304849189805 28 25.327333635300704 24.49405022283382 24.928641892413133 25.249974249452343 29 25.22742121494731 24.82382074536581 24.940828249360877 25.007929790326 30 25.393400889437466 24.68975491985452 24.8344749030639 25.082369287644113 31 25.240005447421183 24.407636043310447 24.910703665459387 25.441654843808987 32 25.15879042594363 24.734717202633735 24.86435259447481 25.242139776947823 33 25.05004587628444 24.640068333900054 24.984108144775124 25.325777645040382 34 25.358845488497895 24.489583072956844 25.01148529666543 25.14008614187983 35 25.267005291406612 24.72472015190707 25.036222733827334 24.97205182285898 36 25.336594880732434 24.67682969663041 24.887442568451338 25.099132854185818 37 25.530774193576196 24.34728231287093 24.86578458215337 25.256158911399506 38 25.23563011824818 24.64835410153708 24.884307443541427 25.231708336673314 39 25.302001332555292 24.65744451062209 24.83457265572408 25.20598150109854 40 25.59867504117871 24.515789265006415 24.83315189706487 25.052383796750004 41 25.183215815193478 24.594770360173957 25.005139308664937 25.21687451596763 42 25.33952174960532 24.539823096572825 24.938487205468036 25.18216794835382 43 25.37574404280894 24.296599135529032 24.946353064286246 25.38130375737578 44 25.138657655122245 24.581311848597778 25.06151189316131 25.21851860311867 45 25.361705795524337 24.57086830508657 24.737913869824272 25.32951202956482 46 25.361523098949196 24.50573670378508 24.856808667072933 25.275931530192793 47 25.346273340777614 24.7629128204421 24.83458307349455 25.056230765285743 48 25.284964625081024 24.954919389317187 24.683703057551476 25.076412928050313 49 25.405814490714885 24.66715109263052 24.665211664839294 25.261822751815306 50 25.309587449457972 24.91925773139006 24.671923928586512 25.09923089056546 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 253.0 1 176.5 2 100.0 3 258.0 4 416.0 5 439.5 6 463.0 7 357.0 8 251.0 9 368.0 10 485.0 11 797.5 12 1110.0 13 2029.5 14 2949.0 15 3763.0 16 4577.0 17 4286.5 18 3996.0 19 3693.0 20 3390.0 21 3846.0 22 4302.0 23 5569.0 24 6836.0 25 8610.5 26 10385.0 27 12742.5 28 15100.0 29 18173.0 30 21246.0 31 26159.0 32 31072.0 33 36443.0 34 41814.0 35 48645.5 36 55477.0 37 62804.0 38 70131.0 39 80270.5 40 90410.0 41 100952.5 42 111495.0 43 121964.0 44 132433.0 45 144745.5 46 157058.0 47 164676.5 48 172295.0 49 178241.5 50 184188.0 51 189287.0 52 194386.0 53 193328.5 54 192271.0 55 186294.0 56 180317.0 57 171567.5 58 162818.0 59 150708.5 60 138599.0 61 122674.0 62 106749.0 63 92672.0 64 78595.0 65 65958.5 66 53322.0 67 43943.0 68 34564.0 69 28615.5 70 22667.0 71 17907.0 72 13147.0 73 10913.0 74 8679.0 75 6952.0 76 5225.0 77 4233.0 78 3241.0 79 2509.5 80 1778.0 81 1352.5 82 927.0 83 691.5 84 456.0 85 336.5 86 217.0 87 143.0 88 69.0 89 50.5 90 32.0 91 30.0 92 28.0 93 23.5 94 19.0 95 17.5 96 16.0 97 16.0 98 16.0 99 10.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03271024412443856 2 0.004180360579803083 3 3.016755057589854E-4 4 4.3096500822712195E-5 5 0.0 6 1.292895024681366E-4 7 0.0 8 0.0 9 0.0 10 8.619300164542439E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 6.033510115179708E-4 17 0.0 18 2.1548250411356103E-4 19 0.0 20 3.016755057589854E-4 21 0.0 22 0.0 23 4.3096500822712195E-5 24 9.050265172769563E-4 25 1.292895024681366E-4 26 6.46447512340683E-4 27 3.016755057589854E-4 28 0.001508377528794927 29 4.3096500822712206E-4 30 0.001335991525504078 31 4.3096500822712206E-4 32 8.619300164542441E-4 33 1.292895024681366E-4 34 6.895440131633951E-4 35 3.4477200658169756E-4 36 1.292895024681366E-4 37 0.0015945705304403514 38 0.0 39 8.619300164542441E-4 40 0.0 41 9.912195189223805E-4 42 0.005387062602839025 43 0.004783711591321054 44 0.0039217815748668105 45 0.002111728540312898 46 0.0022410180427810344 47 0.001077412520567805 48 0.0037062990707532498 49 0.0043958430839166444 50 0.0012067020230359417 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2320374.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.65784545764887 #Duplication Level Percentage of deduplicated Percentage of total 1 66.56168450294835 32.38748157945242 2 16.57917333079032 16.134137074903382 3 6.767481951710885 9.878732728313286 4 3.329287404071372 6.479838079656072 5 1.851311018354476 4.5040402712567325 6 1.135589913496096 3.3153215108494734 7 0.7785375803045731 2.651737288580227 8 0.5296790576136936 2.0618433382016157 9 0.40295691848705373 1.7646313919250125 >10 1.9655143791656913 16.793277791273756 >50 0.08082252887121841 2.6380567951503773 >100 0.017693928110101922 1.2253909676723491 >500 1.7832405075521356E-4 0.08277728354289775 >1k 8.916202537760678E-5 0.08273389922238261 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.292895024681366E-4 2 0.0 0.0 0.0 0.0 1.292895024681366E-4 3 0.0 0.0 0.0 0.0 1.292895024681366E-4 4 0.0 0.0 0.0 0.0 1.292895024681366E-4 5 0.0 0.0 0.0 0.0 1.292895024681366E-4 6 0.0 0.0 0.0 0.0 3.016755057589854E-4 7 0.0 0.0 0.0 0.0 3.016755057589854E-4 8 0.0 0.0 0.0 0.0 3.016755057589854E-4 9 0.0 0.0 0.0 0.0 3.016755057589854E-4 10 0.0 0.0 0.0 0.0 3.878685074044098E-4 11 0.0 0.0 0.0 0.0 4.30965008227122E-4 12 0.0 0.0 0.0 0.0 0.0013790880263267905 13 0.0 0.0 0.0 0.0 0.0018531495353766247 14 0.0 0.0 0.0 0.0 0.0018531495353766247 15 0.0 0.0 0.0 1.292895024681366E-4 0.0023272110444264586 16 0.0 0.0 0.0 1.723860032908488E-4 0.002628886550185444 17 0.0 0.0 0.0 2.15482504113561E-4 0.002758176052653581 18 0.0 0.0 0.0 2.585790049362732E-4 0.0029305620559444295 19 0.0 0.0 0.0 3.016755057589854E-4 0.0029305620559444295 20 0.0 0.0 0.0 4.740615090498342E-4 0.003447720065816976 21 0.0 0.0 0.0 6.46447512340683E-4 0.003620106069107825 22 0.0 0.0 0.0 9.050265172769563E-4 0.0037062990707532493 23 0.0 0.0 0.0 0.0012067020230359417 0.0037062990707532493 24 0.0 0.0 0.0 0.0013790880263267905 0.0037062990707532493 25 0.0 0.0 0.0 0.0016376670312630635 0.0037062990707532493 26 0.0 0.0 0.0 0.0018962460361993368 0.003878685074044098 27 0.0 0.0 0.0 0.0022410180427810344 0.0039217815748668105 28 0.0 0.0 0.0 0.002801272553476293 0.003964878075689522 29 0.0 0.0 0.0 0.0035339130674624003 0.003964878075689522 30 0.0 0.0 0.0 0.0054301591036617376 0.003964878075689522 31 0.0 0.0 0.0 0.009222651176060411 0.004094167578157659 32 0.0 0.0 0.0 0.015557836796999104 0.004137264078980372 33 0.0 0.0 0.0 0.021117285403128978 0.004137264078980372 34 0.0 0.0 0.0 0.02667673400925885 0.004482036085562069 35 0.0 0.0 0.0 0.03378765664500637 0.004482036085562069 36 0.0 0.0 0.0 0.04369985183423017 0.004482036085562069 37 0.0 0.0 0.0 0.059214592130406564 0.004482036085562069 38 0.0 0.0 0.0 0.08003020202777655 0.004611325588030206 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2460 0.0 25.85742 1 GGTATCA 1260 0.0 25.154425 1 GTATAGG 320 0.0 17.883223 1 TATCAAC 3755 0.0 16.873262 2 TCAACGC 3730 0.0 16.75007 4 CAACGCA 3770 0.0 16.572351 5 GTATTAA 400 0.0 16.507591 1 ATCAACG 3810 0.0 16.398363 3 AACGCAG 3865 0.0 16.16501 6 AATATAG 180 5.2750693E-9 15.888322 5 TAGACAG 525 0.0 15.504207 5 TATGCCG 190 1.078115E-8 15.052094 5 GTATTAC 250 9.094947E-12 14.966884 1 GTCTTAT 280 0.0 14.93544 1 TTATACC 210 2.5484042E-9 14.666142 4 TAATACA 410 0.0 14.487287 4 GTATCGA 140 2.7597214E-5 14.142351 9 TAGGACG 125 1.6725744E-4 14.079496 4 CTTACAC 490 0.0 13.91787 3 TCGCGTG 95 0.0062382487 13.896037 44 >>END_MODULE