##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062164_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4469965 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.294505214246644 32.0 32.0 32.0 32.0 32.0 2 31.4574552597168 32.0 32.0 32.0 32.0 32.0 3 31.57721771870697 32.0 32.0 32.0 32.0 32.0 4 31.65444695875695 32.0 32.0 32.0 32.0 32.0 5 31.627328849331036 32.0 32.0 32.0 32.0 32.0 6 35.27400125056908 36.0 36.0 36.0 36.0 36.0 7 35.28030689278328 36.0 36.0 36.0 36.0 36.0 8 35.23304701490951 36.0 36.0 36.0 36.0 36.0 9 35.312578957553356 36.0 36.0 36.0 36.0 36.0 10 35.196894382841926 36.0 36.0 36.0 36.0 36.0 11 35.314500449108664 36.0 36.0 36.0 36.0 36.0 12 35.24149383720007 36.0 36.0 36.0 36.0 36.0 13 35.273441067211934 36.0 36.0 36.0 36.0 36.0 14 35.2364407775005 36.0 36.0 36.0 36.0 36.0 15 35.21312940929068 36.0 36.0 36.0 36.0 36.0 16 35.22680781616858 36.0 36.0 36.0 36.0 36.0 17 35.20965443801014 36.0 36.0 36.0 36.0 36.0 18 35.21052827035558 36.0 36.0 36.0 36.0 36.0 19 35.19640601212761 36.0 36.0 36.0 36.0 36.0 20 35.200872713768455 36.0 36.0 36.0 36.0 36.0 21 35.18933727669008 36.0 36.0 36.0 36.0 36.0 22 35.17258569138684 36.0 36.0 36.0 36.0 36.0 23 35.14708907116722 36.0 36.0 36.0 36.0 36.0 24 35.13020683607142 36.0 36.0 36.0 36.0 36.0 25 35.11415436138762 36.0 36.0 36.0 36.0 36.0 26 35.07481870663417 36.0 36.0 36.0 36.0 36.0 27 35.064158667909034 36.0 36.0 36.0 36.0 36.0 28 35.04698112848758 36.0 36.0 36.0 36.0 36.0 29 35.027906929920036 36.0 36.0 36.0 36.0 36.0 30 35.00926696294042 36.0 36.0 36.0 36.0 36.0 31 35.00901394082504 36.0 36.0 36.0 36.0 36.0 32 34.98508780270092 36.0 36.0 36.0 36.0 36.0 33 34.9698530077976 36.0 36.0 36.0 36.0 36.0 34 34.95521978360009 36.0 36.0 36.0 36.0 36.0 35 34.941794175122176 36.0 36.0 36.0 36.0 36.0 36 34.9209649292556 36.0 36.0 36.0 36.0 36.0 37 34.911693715722606 36.0 36.0 36.0 36.0 36.0 38 34.90057416556953 36.0 36.0 36.0 36.0 36.0 39 34.880717410539006 36.0 36.0 36.0 32.0 36.0 40 34.87141778515044 36.0 36.0 36.0 32.0 36.0 41 34.843536358785805 36.0 36.0 36.0 32.0 36.0 42 34.822771095523116 36.0 36.0 36.0 32.0 36.0 43 34.8136043570811 36.0 36.0 36.0 32.0 36.0 44 34.774550807444804 36.0 36.0 36.0 32.0 36.0 45 34.75950975007634 36.0 36.0 36.0 32.0 36.0 46 34.73553059140284 36.0 36.0 36.0 32.0 36.0 47 34.715568242704364 36.0 36.0 36.0 32.0 36.0 48 34.695884419676666 36.0 36.0 36.0 32.0 36.0 49 34.675724530281556 36.0 36.0 36.0 32.0 36.0 50 34.27011307694803 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 9.0 20 46.0 21 103.0 22 335.0 23 821.0 24 2138.0 25 4852.0 26 10235.0 27 19254.0 28 34089.0 29 53799.0 30 80296.0 31 119517.0 32 182031.0 33 306916.0 34 702189.0 35 2953333.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.40308778488092 17.01882488901063 12.263860859010045 26.314226467098408 2 16.295372061982665 18.68578802559239 37.38683412062287 27.63200579180208 3 19.57281011267225 21.713726041151187 27.534767680039803 31.17869616613676 4 13.052521228358884 14.855332168223278 33.986313983736785 38.10583261968105 5 15.172854898351506 35.81591167533154 32.96597757073157 16.04525585558538 6 36.9485258339521 33.55978622584453 15.457641481975976 14.034046458227396 7 32.062890872747325 29.33642657157271 18.856590599702685 19.744091955977282 8 28.55986568127491 33.64863035840325 17.889401818582474 19.902102141739363 9 26.69929182890694 14.957298323364949 17.84275715805381 40.500652689674304 10 16.11389537539693 26.99714225758519 30.854490485601442 26.034471881416444 11 37.78170522587985 21.223096825142925 21.1175479002632 19.877650048714028 12 24.894898482403885 22.924457557152586 28.15004774087666 24.030596219566867 13 29.84580416177755 19.40787008399395 24.565807562251607 26.180518191976894 14 23.42275610659144 18.829923724234977 24.854579398272694 32.89274077090089 15 25.28728972150789 27.01542405813021 21.74940967099295 25.947876549368953 16 26.008052473293215 26.076442790727643 23.03820797233783 24.87729676364132 17 24.38303208190668 26.11246396783867 24.72171482327043 24.782789126984216 18 24.87306374106256 25.552801367350042 25.330875444075563 24.243259447511832 19 25.647057928667415 24.98058708763361 25.010632079057476 24.361722904641493 20 25.90064186385936 24.526331496698734 24.880809655407855 24.692216984034054 21 25.990494332729675 24.35687975185488 24.837196711831076 24.81542920358437 22 25.770000436245027 24.19251604878338 25.102545545658632 24.93493796931296 23 24.87223599316325 24.426952366464132 25.272597517651164 25.428214122721453 24 24.863828750517627 24.58138540641528 25.269518065523723 25.285267777543375 25 25.156757975707993 24.286904456159224 25.35488108586498 25.201456482267805 26 24.938718430511724 25.01697449697882 25.27116129720728 24.77314577530218 27 25.083121660759822 24.89983118394507 24.955312739236245 25.06173441605887 28 24.97977015495491 24.63624870550245 25.164763894161833 25.219217245380804 29 24.819539045473075 24.921732765212614 25.17770924097002 25.081018948344298 30 25.070152811537653 24.836902962827903 25.112010711684977 24.980933513949463 31 25.2579055117159 24.637697370731804 24.929870595896915 25.174526521655384 32 25.133861396239126 24.83965044580196 24.831551870480066 25.194936287478843 33 24.767553068326347 24.697283747339174 25.16111495779031 25.374048226544176 34 25.2695842158025 24.672663318224252 25.16352012857446 24.89423233739879 35 25.29466180308303 24.59201490842749 25.273006104088296 24.840317184401187 36 24.901760799936106 24.91522849101233 25.082478422051935 25.100532286999627 37 25.40075822691415 24.616199639276207 24.923477069519645 25.059565064290002 38 24.892320185952236 24.723325574137604 25.152344593302185 25.232009646607974 39 25.42945332216835 24.5927282481347 24.819420988306966 25.158397441389983 40 25.49468004187957 24.676887488926074 24.952124851229094 24.876307617965264 41 24.952303439611054 24.923018825376005 25.20799011347844 24.916687621534507 42 25.404670011967106 24.753224618899523 24.990172835053748 24.851932534079623 43 25.14687523770745 24.414602060951545 25.17642926497501 25.262093436365994 44 24.848325936253715 24.891571893215374 25.031645838656114 25.2284563318748 45 25.079627435105067 24.85226110147501 24.979468124304933 25.088643339114995 46 25.04203150836234 24.76285056738901 24.904890778482823 25.290227145765833 47 25.013149013728892 24.86395161252435 25.248052704334327 24.874846669412428 48 25.24405991851097 25.118304963707583 24.690433853475454 24.947201264305995 49 25.107292728659413 24.855266958269322 24.68816704890016 25.349273264171106 50 25.12606534726473 25.184903299936646 24.7631045319989 24.92592682079973 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 74.0 1 90.0 2 106.0 3 307.5 4 509.0 5 565.0 6 621.0 7 500.0 8 379.0 9 554.5 10 730.0 11 1316.0 12 1902.0 13 3388.0 14 4874.0 15 6536.5 16 8199.0 17 7713.0 18 7227.0 19 6977.5 20 6728.0 21 7797.5 22 8867.0 23 11401.0 24 13935.0 25 18242.5 26 22550.0 27 28411.5 28 34273.0 29 40584.0 30 46895.0 31 56746.5 32 66598.0 33 77350.0 34 88102.0 35 101752.5 36 115403.0 37 130922.5 38 146442.0 39 164290.5 40 182139.0 41 198805.0 42 215471.0 43 230887.0 44 246303.0 45 266298.0 46 286293.0 47 303708.5 48 321124.0 49 333491.0 50 345858.0 51 349396.0 52 352934.0 53 354481.0 54 356028.0 55 351344.5 56 346661.0 57 331192.0 58 315723.0 59 292753.0 60 269783.0 61 238711.0 62 207639.0 63 179533.0 64 151427.0 65 128490.0 66 105553.0 67 87347.0 68 69141.0 69 58312.0 70 47483.0 71 37776.0 72 28069.0 73 23743.0 74 19417.0 75 15117.5 76 10818.0 77 8969.0 78 7120.0 79 6041.5 80 4963.0 81 3884.5 82 2806.0 83 2123.5 84 1441.0 85 1125.0 86 809.0 87 558.0 88 307.0 89 200.0 90 93.0 91 65.5 92 38.0 93 34.0 94 30.0 95 33.0 96 36.0 97 32.0 98 28.0 99 22.0 100 16.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03398236898946636 2 0.004451936424558134 3 2.0134385839710151E-4 4 2.2371539821900173E-5 5 4.4743079643800346E-5 6 3.1320155750660245E-4 7 0.0 8 0.0 9 0.0 10 6.71146194657005E-5 11 0.0 12 2.2371539821900173E-5 13 0.0 14 0.0 15 0.0 16 7.606323539446058E-4 17 0.0 18 1.1185769910950085E-4 19 4.4743079643800346E-5 20 3.1320155750660245E-4 21 0.0 22 0.0 23 1.1185769910950085E-4 24 9.396046725198071E-4 25 3.803161769723029E-4 26 5.36916955725604E-4 27 2.460869380409019E-4 28 0.0018792093450396142 29 5.14545415903704E-4 30 0.0017897231857520136 31 3.1320155750660245E-4 32 9.619762123417075E-4 33 4.474307964380034E-4 34 5.816600353694045E-4 35 2.237153982190017E-4 36 1.7897231857520138E-4 37 0.0014094070087797108 38 0.0 39 8.501185132322066E-4 40 1.1185769910950085E-4 41 9.17233132697907E-4 42 0.004742766442242836 43 0.004138734867051532 44 0.004093991787407731 45 0.001923952424683415 46 0.002326640141477618 47 0.001073833911451208 48 0.0036018179113259277 49 0.004116363327229632 50 0.0013646639291359105 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 4469965.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.944704125008954 #Duplication Level Percentage of deduplicated Percentage of total 1 62.595856888763166 26.255646966505747 2 16.83622603770348 14.123810394664885 3 7.6762914864590694 9.659393255305524 4 4.053124222428702 6.800283851667153 5 2.3406946064903638 4.908987135812129 6 1.5507969630159315 3.9028631862999417 7 1.0333483784824924 3.034044439545413 8 0.7339903345108857 2.462960592934036 9 0.5337287355499143 2.014838450609067 >10 2.472421963168691 17.754366255265868 >50 0.11802167551761436 3.3817065869715544 >100 0.050662402113379364 3.843871841698162 >500 0.0036003613232711952 1.0278559977326038 >1k 0.0012359444730828282 0.8293710449878428 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.1185769910950086E-4 2 0.0 0.0 0.0 0.0 1.1185769910950086E-4 3 0.0 0.0 0.0 0.0 1.1185769910950086E-4 4 0.0 0.0 0.0 0.0 1.1185769910950086E-4 5 0.0 0.0 0.0 0.0 1.1185769910950086E-4 6 4.4743079643800346E-5 0.0 0.0 0.0 2.2371539821900173E-4 7 4.4743079643800346E-5 0.0 0.0 2.2371539821900173E-5 2.4608693804090186E-4 8 8.948615928760069E-5 0.0 0.0 2.2371539821900173E-5 2.4608693804090186E-4 9 8.948615928760069E-5 0.0 0.0 4.4743079643800346E-5 2.4608693804090186E-4 10 8.948615928760069E-5 0.0 0.0 4.4743079643800346E-5 2.684584778628021E-4 11 8.948615928760069E-5 0.0 0.0 4.4743079643800346E-5 2.9083001768470223E-4 12 8.948615928760069E-5 0.0 0.0 4.4743079643800346E-5 5.592884955475043E-4 13 8.948615928760069E-5 0.0 0.0 4.4743079643800346E-5 7.158892743008055E-4 14 8.948615928760069E-5 0.0 0.0 6.711461946570052E-5 7.606323539446058E-4 15 8.948615928760069E-5 0.0 0.0 1.566007787533012E-4 9.172331326979071E-4 16 1.1185769910950086E-4 0.0 0.0 1.566007787533012E-4 9.172331326979071E-4 17 1.1185769910950086E-4 0.0 0.0 1.566007787533012E-4 9.396046725198072E-4 18 1.1185769910950086E-4 0.0 0.0 1.7897231857520138E-4 0.001029090831807408 19 1.1185769910950086E-4 0.0 0.0 1.7897231857520138E-4 0.001029090831807408 20 1.1185769910950086E-4 0.0 0.0 3.3557309732850255E-4 0.0011409485309169087 21 1.1185769910950086E-4 0.0 0.0 4.2505925661610324E-4 0.001163320070738809 22 1.1185769910950086E-4 0.0 0.0 4.921738760818037E-4 0.001163320070738809 23 1.1185769910950086E-4 0.0 0.0 6.040315751913046E-4 0.0012975493096702099 24 1.1185769910950086E-4 0.0 0.0 9.619762123417074E-4 0.0012975493096702099 25 1.1185769910950086E-4 0.0 0.0 0.0011409485309169087 0.0012975493096702099 26 1.1185769910950086E-4 0.0 0.0 0.0015436362477111117 0.0013646639291359105 27 1.1185769910950086E-4 0.0 0.0 0.0017673516459301136 0.0013646639291359105 28 1.1185769910950086E-4 0.0 0.0 0.002326640141477618 0.0013646639291359105 29 1.1185769910950086E-4 0.0 0.0 0.0036241894511478277 0.0013870354689578107 30 1.1185769910950086E-4 0.0 0.0 0.005570513415653143 0.0013870354689578107 31 1.1185769910950086E-4 0.0 0.0 0.00910521670751337 0.0014541500884235111 32 1.7897231857520138E-4 0.0 0.0 0.013534781592249604 0.0015436362477111117 33 1.7897231857520138E-4 0.0 0.0 0.018881579609683743 0.0015436362477111117 34 1.7897231857520138E-4 0.0 0.0 0.024608693804090188 0.0016107508671768123 35 1.7897231857520138E-4 0.0 0.0 0.030537151856893735 0.0016331224069987126 36 1.7897231857520138E-4 0.0 0.0 0.0389712223697501 0.0016331224069987126 37 2.2371539821900173E-4 0.0 0.0 0.051901972386808395 0.0016331224069987126 38 2.2371539821900173E-4 0.0 0.0 0.06995580502308184 0.001677865486642513 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 4880 0.0 27.467028 1 GGTATCA 1965 0.0 25.20195 1 GTAGGAC 850 0.0 20.446238 3 ATCAACG 7105 0.0 18.515793 3 TATCAAC 7200 0.0 18.486403 2 TCAACGC 7145 0.0 18.412136 4 CAACGCA 7325 0.0 17.899622 5 AACGCAG 7615 0.0 17.189068 6 CGCAATA 490 0.0 16.612694 36 ACCGTAT 265 0.0 15.772776 8 CGTTCGG 140 1.589131E-6 15.7136545 14 TAGGACC 1575 0.0 15.504139 4 GTATAGG 725 0.0 15.482687 1 CGCGTAA 460 0.0 15.303733 10 TCTAGCG 555 0.0 15.062796 28 CGCGATT 120 1.18255426E-4 14.666077 12 TAGGACA 885 0.0 14.666077 4 CGTCGTA 560 0.0 14.5351305 10 ACGGACC 1045 0.0 14.525569 8 GCGAAAG 1000 0.0 14.519741 18 >>END_MODULE