##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062162_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2285802 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.3218677733242 32.0 32.0 32.0 32.0 32.0 2 31.492680468387025 32.0 32.0 32.0 32.0 32.0 3 31.59774906137977 32.0 32.0 32.0 32.0 32.0 4 31.666125062450728 32.0 32.0 32.0 32.0 32.0 5 31.647696082162845 32.0 32.0 32.0 32.0 32.0 6 35.29296938229995 36.0 36.0 36.0 36.0 36.0 7 35.29743389847415 36.0 36.0 36.0 36.0 36.0 8 35.25611404662346 36.0 36.0 36.0 36.0 36.0 9 35.32838627317677 36.0 36.0 36.0 36.0 36.0 10 35.21760502440719 36.0 36.0 36.0 36.0 36.0 11 35.33408667942368 36.0 36.0 36.0 36.0 36.0 12 35.25502427594341 36.0 36.0 36.0 36.0 36.0 13 35.29111357851642 36.0 36.0 36.0 36.0 36.0 14 35.25337583920217 36.0 36.0 36.0 36.0 36.0 15 35.235058854616454 36.0 36.0 36.0 36.0 36.0 16 35.243542529055446 36.0 36.0 36.0 36.0 36.0 17 35.22586951975718 36.0 36.0 36.0 36.0 36.0 18 35.21935408228709 36.0 36.0 36.0 36.0 36.0 19 35.21697986089784 36.0 36.0 36.0 36.0 36.0 20 35.21529686298288 36.0 36.0 36.0 36.0 36.0 21 35.20640414174106 36.0 36.0 36.0 36.0 36.0 22 35.186795706714754 36.0 36.0 36.0 36.0 36.0 23 35.160636835561434 36.0 36.0 36.0 36.0 36.0 24 35.1464251934332 36.0 36.0 36.0 36.0 36.0 25 35.13174194440288 36.0 36.0 36.0 36.0 36.0 26 35.08749314245066 36.0 36.0 36.0 36.0 36.0 27 35.0761400156269 36.0 36.0 36.0 36.0 36.0 28 35.056281777686785 36.0 36.0 36.0 36.0 36.0 29 35.03831521715354 36.0 36.0 36.0 36.0 36.0 30 35.02083995026691 36.0 36.0 36.0 36.0 36.0 31 35.022770126196406 36.0 36.0 36.0 36.0 36.0 32 34.99121314969538 36.0 36.0 36.0 36.0 36.0 33 34.97902093007181 36.0 36.0 36.0 36.0 36.0 34 34.965682066950684 36.0 36.0 36.0 36.0 36.0 35 34.95034215561978 36.0 36.0 36.0 36.0 36.0 36 34.93653956029437 36.0 36.0 36.0 36.0 36.0 37 34.9231989472404 36.0 36.0 36.0 36.0 36.0 38 34.901261789078845 36.0 36.0 36.0 36.0 36.0 39 34.89184715036561 36.0 36.0 36.0 36.0 36.0 40 34.877580385352715 36.0 36.0 36.0 32.0 36.0 41 34.856431134455214 36.0 36.0 36.0 32.0 36.0 42 34.81859933625047 36.0 36.0 36.0 32.0 36.0 43 34.814527242517066 36.0 36.0 36.0 32.0 36.0 44 34.77241117122131 36.0 36.0 36.0 32.0 36.0 45 34.75849745516016 36.0 36.0 36.0 32.0 36.0 46 34.738253357027425 36.0 36.0 36.0 32.0 36.0 47 34.71512711949679 36.0 36.0 36.0 32.0 36.0 48 34.688114281114466 36.0 36.0 36.0 32.0 36.0 49 34.6761753642704 36.0 36.0 36.0 32.0 36.0 50 34.27827913353825 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 7.0 20 24.0 21 68.0 22 156.0 23 411.0 24 1108.0 25 2525.0 26 5029.0 27 10017.0 28 16961.0 29 27197.0 30 40108.0 31 60151.0 32 90015.0 33 154002.0 34 358412.0 35 1519611.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.0891898196064 17.465194552963403 12.285109487326148 26.16050614010404 2 16.291774748969782 19.56047234937859 36.8639368310801 27.283816070571525 3 18.668562428908917 22.917971826056522 28.30142619651763 30.11203954851693 4 12.710686538329451 15.598470733016567 35.217151449316894 36.47369127933709 5 14.922340133721177 36.27901116501393 32.884621189683614 15.91402751158128 6 35.31980311462479 34.78773486884443 16.141415882512753 13.751046134018024 7 31.28096834283984 30.062358856978864 19.637352666591422 19.019320133589872 8 28.652262969408547 32.69224543508143 18.684426735124042 19.971064860385983 9 27.375511964728354 14.178655894080064 18.1895019778616 40.256330163329984 10 16.331393822731645 26.41009712135795 30.697611339574767 26.560897716335635 11 37.658423607994045 21.163512850194373 21.733247236637293 19.44481630517429 12 24.88225139360277 23.332379619932084 28.090578274058732 23.69479071240641 13 29.31382508196248 19.2426115647812 25.052126124659967 26.391437228596352 14 23.999760259200052 19.126022288894664 24.694614844155353 32.17960260774993 15 25.478059779455965 26.73871140194995 21.85329262989533 25.92993618869876 16 26.143862048388584 25.781098588801143 23.0717910286479 25.00324833416237 17 24.36527748247661 25.777517037783674 24.68687139131036 25.170334088429357 18 25.18271518305642 24.96362320730003 25.521327781370008 24.33233382827354 19 25.87791943484169 24.73770694049616 25.101999210780285 24.282374413881865 20 26.168279086778444 24.047794249535613 24.585112070270426 25.198814593415513 21 26.95478436015018 23.974342484607153 24.353596680727378 24.71727647451529 22 26.219418829802404 23.92840674739107 24.884613802945314 24.967560619861214 23 24.67590135799223 24.019326266809752 25.39236792704177 25.912404448156245 24 24.99424704543128 24.51397377352696 25.192647417820247 25.299131763221517 25 25.20303649144543 24.043527943876004 25.19958036500195 25.55385519967661 26 24.900373743379212 24.997320404778563 25.338164916945672 24.764140934896556 27 25.468109084291136 24.43822535033809 24.85436120171914 25.239304363651637 28 25.00702172842142 24.379703573687898 25.271047466884127 25.342227231006554 29 24.871663850723206 24.618535178585645 25.32139816623895 25.188402804452192 30 24.878750042655135 24.683980131019077 25.458509896428954 24.97875992989683 31 25.504366326025718 24.460831686564248 24.58114025397795 25.453661733432085 32 25.43872121291929 24.399212351435455 24.522758204927747 25.639308230717507 33 24.9105455029073 24.302268047190502 25.001060898180462 25.78612555172174 34 25.596600553683114 24.395830927156723 25.123502483174263 24.884066035985903 35 25.923343149019797 24.208098969418547 25.21020020588005 24.65835767568161 36 24.917763985372293 24.791243674531312 24.862116047823978 25.428876292272417 37 25.868744449354047 24.522808506542653 24.789414508021366 24.819032536081934 38 25.139710263618632 24.179565859160153 25.115998673550905 25.564725203670307 39 25.827460814388736 24.260211358183696 24.5084408527825 25.40388697464507 40 25.86283757859936 24.471246622081274 24.89945537691164 24.766460422407725 41 24.892826284301822 24.886395205127364 25.256466625105272 24.96431188546554 42 26.09049079687499 24.802040170784238 24.813196534439694 24.294272497901073 43 25.58710217095897 23.971548546233613 25.022640588209043 25.41870869459837 44 25.03858767364453 24.638929625183316 24.78816154672696 25.534321154445195 45 25.302930011431652 24.800208595919344 24.732003680178003 25.164857712471 46 25.149654753930967 24.67510820247611 24.76685007750154 25.408386966091378 47 25.287692232309727 24.509444494998636 25.185407493997662 25.017455778693975 48 25.969489607837904 25.014470320639553 24.206582366202582 24.80945770531996 49 25.299129070546293 25.058592066653862 24.349274779620767 25.293004083179078 50 25.421378975740765 25.175553610185457 24.328748880573674 25.074318533500104 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 129.0 1 115.0 2 101.0 3 203.5 4 306.0 5 363.0 6 420.0 7 319.5 8 219.0 9 325.0 10 431.0 11 710.0 12 989.0 13 1857.0 14 2725.0 15 3639.5 16 4554.0 17 4341.5 18 4129.0 19 4006.0 20 3883.0 21 4572.0 22 5261.0 23 6263.0 24 7265.0 25 9169.0 26 11073.0 27 14224.5 28 17376.0 29 20608.5 30 23841.0 31 27287.5 32 30734.0 33 35776.5 34 40819.0 35 47541.0 36 54263.0 37 64977.5 38 75692.0 39 84602.0 40 93512.0 41 103626.0 42 113740.0 43 118949.5 44 124159.0 45 135724.0 46 147289.0 47 158342.0 48 169395.0 49 176084.0 50 182773.0 51 179801.5 52 176830.0 53 175881.5 54 174933.0 55 176102.0 56 177271.0 57 171618.0 58 165965.0 59 152284.5 60 138604.0 61 121100.5 62 103597.0 63 89002.5 64 74408.0 65 62138.0 66 49868.0 67 43150.5 68 36433.0 69 32217.0 70 28001.0 71 21872.5 72 15744.0 73 13880.0 74 12016.0 75 8817.0 76 5618.0 77 4990.5 78 4363.0 79 3665.5 80 2968.0 81 2360.5 82 1753.0 83 1500.5 84 1248.0 85 967.0 86 686.0 87 450.5 88 215.0 89 144.0 90 73.0 91 58.0 92 43.0 93 34.5 94 26.0 95 26.5 96 27.0 97 25.5 98 24.0 99 17.0 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.032505002620524436 2 0.0052935468601392425 3 8.749664231635111E-5 4 4.3748321158175556E-5 5 4.3748321158175556E-5 6 2.1874160579087775E-4 7 0.0 8 0.0 9 0.0 10 8.749664231635111E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 6.562248173726333E-4 17 0.0 18 1.7499328463270222E-4 19 0.0 20 1.7499328463270222E-4 21 0.0 22 0.0 23 4.3748321158175556E-5 24 8.74966423163511E-4 25 2.624899269490533E-4 26 3.9373489042358005E-4 27 4.374832115817555E-4 28 0.001749932846327022 29 3.4998656926540445E-4 30 0.0012249529924289156 31 5.687281750562822E-4 32 4.812315327399311E-4 33 1.3124496347452665E-4 34 7.874697808471601E-4 35 2.1874160579087775E-4 36 1.3124496347452665E-4 37 0.0013999462770616178 38 0.0 39 6.124764962144578E-4 40 4.3748321158175556E-5 41 0.00118120467127074 42 0.004856063648557486 43 0.003674858977286747 44 0.004287335473501204 45 0.0018811778098015489 46 0.0017936811674851977 47 0.0011374563501125644 48 0.0038936005830776245 49 0.0036311106561285715 50 0.0014436945982197933 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2285802.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.75438991571276 #Duplication Level Percentage of deduplicated Percentage of total 1 73.31067047850851 36.47527683970045 2 15.033563436956578 14.95971554129881 3 5.075006727593559 7.575115906486662 4 2.1751571208779303 4.328944620803988 5 1.1580544990943697 2.880914754579335 6 0.6968589446467749 2.0803074988924637 7 0.4507679121472396 1.569937772372586 8 0.3231671245494854 1.2863186498219845 9 0.25144313955462866 1.1259360006328774 >10 1.3558078515655543 12.167746209566523 >50 0.09444311210385148 3.2635533450079044 >100 0.0626875132073916 6.438202696498338 >500 0.008395380167552542 2.8801558452426432 >1k 0.003976759026735338 2.96787431909548 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2759 0.12070161807540636 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2445 0.10696464523173924 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 2357 0.10311479296981978 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 2333 0.10206483326202356 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 2304 0.1007961319484365 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.3124496347452667E-4 2 0.0 0.0 0.0 0.0 1.3124496347452667E-4 3 0.0 0.0 0.0 0.0 1.3124496347452667E-4 4 0.0 0.0 0.0 0.0 1.3124496347452667E-4 5 0.0 0.0 0.0 0.0 1.3124496347452667E-4 6 0.0 0.0 0.0 0.0 1.3124496347452667E-4 7 0.0 0.0 0.0 0.0 1.3124496347452667E-4 8 0.0 0.0 0.0 0.0 1.3124496347452667E-4 9 0.0 0.0 0.0 0.0 1.3124496347452667E-4 10 0.0 0.0 0.0 0.0 1.3124496347452667E-4 11 0.0 0.0 0.0 0.0 1.3124496347452667E-4 12 0.0 0.0 0.0 0.0 1.7499328463270222E-4 13 0.0 0.0 0.0 0.0 2.1874160579087777E-4 14 0.0 0.0 0.0 0.0 2.1874160579087777E-4 15 0.0 0.0 0.0 8.749664231635111E-5 3.062382481072289E-4 16 8.749664231635111E-5 0.0 0.0 1.3124496347452667E-4 4.812315327399311E-4 17 8.749664231635111E-5 0.0 0.0 1.7499328463270222E-4 5.687281750562822E-4 18 8.749664231635111E-5 0.0 0.0 2.6248992694905335E-4 5.687281750562822E-4 19 8.749664231635111E-5 0.0 0.0 3.4998656926540445E-4 5.687281750562822E-4 20 8.749664231635111E-5 0.0 0.0 4.3748321158175555E-4 6.124764962144578E-4 21 8.749664231635111E-5 0.0 0.0 5.249798538981067E-4 6.124764962144578E-4 22 8.749664231635111E-5 0.0 0.0 7.437214596889844E-4 6.124764962144578E-4 23 8.749664231635111E-5 0.0 0.0 9.624630654798622E-4 6.124764962144578E-4 24 8.749664231635111E-5 0.0 0.0 0.0014874429193779688 6.124764962144578E-4 25 8.749664231635111E-5 0.0 0.0 0.0017499328463270222 6.124764962144578E-4 26 8.749664231635111E-5 0.0 0.0 0.002056171094434251 6.562248173726333E-4 27 8.749664231635111E-5 0.0 0.0 0.002449905984857831 6.999731385308089E-4 28 8.749664231635111E-5 0.0 0.0 0.003062382481072289 6.999731385308089E-4 29 8.749664231635111E-5 0.0 0.0 0.004112342188868502 6.999731385308089E-4 30 8.749664231635111E-5 0.0 0.0 0.006824738100675387 6.999731385308089E-4 31 8.749664231635111E-5 0.0 0.0 0.01172455007039105 6.999731385308089E-4 32 8.749664231635111E-5 0.0 0.0 0.01811180495948468 6.999731385308089E-4 33 8.749664231635111E-5 0.0 0.0 0.023055365250358516 6.999731385308089E-4 34 8.749664231635111E-5 0.0 0.0 0.028392660431655937 7.8746978084716E-4 35 8.749664231635111E-5 0.0 0.0 0.03552363678043855 7.8746978084716E-4 36 8.749664231635111E-5 0.0 0.0 0.04449204261786454 8.312181020053356E-4 37 8.749664231635111E-5 0.0 0.0 0.05827276378268984 8.312181020053356E-4 38 8.749664231635111E-5 0.0 0.0 0.0767783036325981 8.312181020053356E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3035 0.0 28.565926 1 GGTATCA 1270 0.0 24.430153 1 CGGATCG 145 0.0 24.275475 26 TAGGACG 140 7.2759576E-12 21.999651 4 TCAACGC 4475 0.0 19.17288 4 ATCAACG 4580 0.0 18.78136 3 CAACGCA 4600 0.0 18.699701 5 TATCAAC 4785 0.0 18.43649 2 AACGCAG 4710 0.0 18.403105 6 TACGAAT 570 0.0 17.755268 41 CGATTTT 200 3.6379788E-12 17.59972 31 ACCGTCG 555 0.0 17.441164 8 ATACCGT 555 0.0 17.441164 6 TACCGTC 560 0.0 17.285439 7 CGTCGTA 550 0.0 17.199726 10 ATACGAA 590 0.0 17.153395 40 CGCAATA 565 0.0 16.743464 36 GTTATAG 410 0.0 16.637522 1 CCGTCGT 585 0.0 16.546745 9 ATCGATT 210 1.5097612E-10 15.714036 29 >>END_MODULE