##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062160_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1282805 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.312985215991517 32.0 32.0 32.0 32.0 32.0 2 31.506522815236924 32.0 32.0 32.0 32.0 32.0 3 31.59381121838471 32.0 32.0 32.0 32.0 32.0 4 31.6628443138279 32.0 32.0 32.0 32.0 32.0 5 31.64612314420352 32.0 32.0 32.0 32.0 32.0 6 35.28159463051672 36.0 36.0 36.0 36.0 36.0 7 35.29489361204548 36.0 36.0 36.0 36.0 36.0 8 35.24413999009982 36.0 36.0 36.0 36.0 36.0 9 35.32613140734562 36.0 36.0 36.0 36.0 36.0 10 35.2133348404473 36.0 36.0 36.0 36.0 36.0 11 35.319701747342734 36.0 36.0 36.0 36.0 36.0 12 35.25515569396752 36.0 36.0 36.0 36.0 36.0 13 35.28325427481184 36.0 36.0 36.0 36.0 36.0 14 35.24837134248775 36.0 36.0 36.0 36.0 36.0 15 35.23352419112803 36.0 36.0 36.0 36.0 36.0 16 35.24356624740315 36.0 36.0 36.0 36.0 36.0 17 35.231664204614106 36.0 36.0 36.0 36.0 36.0 18 35.223117309333844 36.0 36.0 36.0 36.0 36.0 19 35.223413535182665 36.0 36.0 36.0 36.0 36.0 20 35.22366376807075 36.0 36.0 36.0 36.0 36.0 21 35.21232689301959 36.0 36.0 36.0 36.0 36.0 22 35.190557411297895 36.0 36.0 36.0 36.0 36.0 23 35.161661359286875 36.0 36.0 36.0 36.0 36.0 24 35.15178144768691 36.0 36.0 36.0 36.0 36.0 25 35.15093018814239 36.0 36.0 36.0 36.0 36.0 26 35.09456776361177 36.0 36.0 36.0 36.0 36.0 27 35.08795958855789 36.0 36.0 36.0 36.0 36.0 28 35.06115738557302 36.0 36.0 36.0 36.0 36.0 29 35.051983738759986 36.0 36.0 36.0 36.0 36.0 30 35.033737006014164 36.0 36.0 36.0 36.0 36.0 31 35.03306114335382 36.0 36.0 36.0 36.0 36.0 32 35.007980168458964 36.0 36.0 36.0 36.0 36.0 33 34.993423006614414 36.0 36.0 36.0 36.0 36.0 34 34.98021211329859 36.0 36.0 36.0 36.0 36.0 35 34.9746836035095 36.0 36.0 36.0 36.0 36.0 36 34.94625995377318 36.0 36.0 36.0 36.0 36.0 37 34.939097524565305 36.0 36.0 36.0 36.0 36.0 38 34.93093962059705 36.0 36.0 36.0 36.0 36.0 39 34.911226569899554 36.0 36.0 36.0 36.0 36.0 40 34.899526428412734 36.0 36.0 36.0 36.0 36.0 41 34.873398529004795 36.0 36.0 36.0 36.0 36.0 42 34.85520324601167 36.0 36.0 36.0 32.0 36.0 43 34.832624599997665 36.0 36.0 36.0 32.0 36.0 44 34.80696832332272 36.0 36.0 36.0 32.0 36.0 45 34.79294670663117 36.0 36.0 36.0 32.0 36.0 46 34.77241045989063 36.0 36.0 36.0 32.0 36.0 47 34.74103156754144 36.0 36.0 36.0 32.0 36.0 48 34.72757433904607 36.0 36.0 36.0 32.0 36.0 49 34.705735478112416 36.0 36.0 36.0 32.0 36.0 50 34.31442580906685 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 2.0 19 0.0 20 13.0 21 47.0 22 107.0 23 248.0 24 597.0 25 1458.0 26 3028.0 27 5753.0 28 9907.0 29 15439.0 30 22780.0 31 33701.0 32 49781.0 33 83557.0 34 190610.0 35 865776.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.50621146346618 17.641164484668046 12.824521770729117 26.02810228113666 2 15.916796402680838 19.23213950214113 38.01157372578705 26.83949036939098 3 18.940788258212677 22.075330350802112 28.553643856461203 30.430237534524007 4 12.920923945453822 15.645894186402746 34.37285382089066 37.060328047252774 5 14.731311461991496 36.282053780582395 33.45629304531866 15.53034171210745 6 35.65733449121532 34.322678012662905 16.10716229004944 13.912825206072332 7 31.421767143096574 30.291041896469068 19.09191186501456 19.195279095419803 8 28.0670094051707 34.31456846519931 18.214615627472607 19.40380650215738 9 26.628677000791235 15.433366723703134 18.30363929046114 39.63431698504449 10 16.313182928321808 27.832254835699636 31.23106197911916 24.623500256859394 11 36.722338936938975 22.04427017356496 21.520184283659635 19.71320660583643 12 24.209681128464574 23.904178733322677 28.57269811078067 23.31344202743207 13 29.63295278705649 19.965232439848613 24.786464037792182 25.615350735302716 14 22.920864823570223 19.33434933602535 25.66149960438258 32.08328623602184 15 25.066709281613342 27.226195719536484 22.101410580719595 25.60568441813058 16 25.403901936312707 26.651876092825145 23.27987471147078 24.664347259391377 17 24.076457450664755 26.43558451986077 25.126811947256204 24.361146082218262 18 24.216422942571853 26.17081500433036 25.594888692963767 24.01787336013402 19 25.193150946558518 25.663292550309674 25.401210628271638 23.742345874860167 20 25.648423297713446 25.07577151302927 25.440909133429578 23.834896055827702 21 25.57551615405303 25.273911467448286 25.25722927490928 23.8933431035894 22 25.603891472203493 24.839628782238922 25.193150946558518 24.363328798999067 23 24.599705021187958 25.06150588866265 25.32023598304963 25.018553107099763 24 24.45817657963296 25.25105277682067 25.542758875520544 24.748011768025833 25 24.680231742339437 24.868335302976917 25.84658295421592 24.604850000467728 26 24.58276848864321 25.432315690430553 25.57910385164963 24.405811969276606 27 24.76853385677124 25.359272404683193 25.291685927903078 24.580507810642494 28 25.164096727420134 25.142113222844138 25.249614119334566 24.444175930401162 29 24.86040248052105 25.429940091752773 25.291570360034143 24.41808706769203 30 24.813198823493643 25.26043026829989 25.35561409157136 24.570756816635107 31 24.841342784555938 25.01588326134221 25.384920607079685 24.75785334702217 32 24.724449346933845 25.333510030831114 25.40234410018748 24.53969652204756 33 24.5404392419401 25.288411842522727 25.372368746204593 24.798780169332577 34 24.879851635771743 25.377049538154754 25.197674753993056 24.545424072080444 35 24.69256680119021 25.2582828642679 25.736455984140928 24.31269435040096 36 24.909436318550295 25.27519899844013 25.446932839829156 24.36843184318042 37 25.124631950837912 24.969967500196837 25.317182955416257 24.588217593548993 38 24.67615888619081 25.543321081536163 25.32582894516314 24.45469108710989 39 24.74483412366609 25.37595699384078 25.109818965335794 24.769389917157326 40 24.878391398841913 25.37979301592449 25.168926819685627 24.57288876554797 41 24.704803822290614 25.100815331569994 25.493007044795295 24.7013738013441 42 24.890371477952293 25.155506840429986 25.480903783382615 24.47321789823511 43 24.761702814350762 24.95955944547132 25.409531263764407 24.86920647641351 44 24.666322094189898 25.127363186406694 25.393510343800695 24.81280437560271 45 24.481570727075567 25.453374691780045 25.49367812910976 24.57137645203462 46 24.543429809373613 25.232484987577674 25.114069463684473 25.110015739364233 47 24.845064273965342 25.32168164703498 25.490844175586027 24.342409903413653 48 24.59448608658707 25.612217453839587 25.157181223226573 24.63611523634677 49 24.84155234268662 25.26649609669166 25.1895525110738 24.702399049547928 50 24.738810682374147 25.68776085800749 25.322306292709772 24.251122166908587 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 47.0 1 52.5 2 58.0 3 133.0 4 208.0 5 238.5 6 269.0 7 226.0 8 183.0 9 210.5 10 238.0 11 453.0 12 668.0 13 1227.0 14 1786.0 15 2282.5 16 2779.0 17 2656.5 18 2534.0 19 2425.5 20 2317.0 21 2695.5 22 3074.0 23 4063.5 24 5053.0 25 6250.5 26 7448.0 27 9078.5 28 10709.0 29 12874.0 30 15039.0 31 18124.0 32 21209.0 33 24023.0 34 26837.0 35 31621.5 36 36406.0 37 40407.0 38 44408.0 39 50153.0 40 55898.0 41 61175.0 42 66452.0 43 72513.5 44 78575.0 45 83802.5 46 89030.0 47 92525.5 48 96021.0 49 99559.0 50 103097.0 51 103452.0 52 103807.0 53 102754.5 54 101702.0 55 98691.5 56 95681.0 57 90176.5 58 84672.0 59 77797.0 60 70922.0 61 61602.5 62 52283.0 63 44495.0 64 36707.0 65 31294.5 66 25882.0 67 21686.5 68 17491.0 69 13899.0 70 10307.0 71 7932.5 72 5558.0 73 4390.5 74 3223.0 75 2447.5 76 1672.0 77 1399.0 78 1126.0 79 946.5 80 767.0 81 577.5 82 388.0 83 268.5 84 149.0 85 104.0 86 59.0 87 39.5 88 20.0 89 17.0 90 14.0 91 10.5 92 7.0 93 7.0 94 7.0 95 6.5 96 6.0 97 8.0 98 10.0 99 6.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.032584843370582435 2 0.005612700293497453 3 1.5590834148604036E-4 4 1.5590834148604036E-4 5 0.0 6 2.3386251222906054E-4 7 0.0 8 0.0 9 0.0 10 1.5590834148604036E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 4.677250244581211E-4 17 0.0 18 1.5590834148604036E-4 19 0.0 20 7.795417074302018E-5 21 0.0 22 0.0 23 7.795417074302018E-5 24 5.456791952011413E-4 25 7.795417074302018E-5 26 3.118166829720807E-4 27 3.118166829720807E-4 28 0.0019488542685755046 29 7.795417074302018E-4 30 0.0018709000978324843 31 6.236333659441614E-4 32 7.795417074302018E-4 33 3.118166829720807E-4 34 0.0012472667318883229 35 4.677250244581211E-4 36 4.677250244581211E-4 37 0.002182716780804565 38 0.0 39 9.354500489162421E-4 40 7.795417074302018E-5 41 0.0010913583904022825 42 0.0049890669275532915 43 0.004521341903095171 44 0.00436543356160913 45 0.0028063501467487264 46 0.0026504418052626863 47 0.0011693125611453026 48 0.003897708537151009 49 0.0036638460249219483 50 0.0014811292441173833 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1282805.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.733248212574594 #Duplication Level Percentage of deduplicated Percentage of total 1 55.760091789764665 19.36729108489839 2 15.945963669973448 11.077102282757695 3 8.300590493465542 8.64919409761427 4 5.06767299552537 7.040669760549763 5 3.419800147384857 5.93903836782587 6 2.365006061787012 4.928660554097509 7 1.7589750898208603 4.276644287613855 8 1.3146741186045154 3.6530321984110694 9 1.028431735273174 3.2148697257838768 >10 4.907311113098682 27.79874342835853 >50 0.10665425574833312 2.4515992572932337 >100 0.023925675340812545 1.3656884769486943 >500 6.771406595664694E-4 0.1433892994329683 >1k 2.2571355318882312E-4 0.09407717841419462 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 2.3386251222906054E-4 0.0 3 0.0 0.0 0.0 2.3386251222906054E-4 0.0 4 0.0 0.0 0.0 3.897708537151009E-4 0.0 5 0.0 0.0 0.0 3.897708537151009E-4 0.0 6 0.0 0.0 0.0 3.897708537151009E-4 0.0 7 0.0 0.0 0.0 4.677250244581211E-4 0.0 8 0.0 0.0 0.0 4.677250244581211E-4 0.0 9 0.0 0.0 0.0 5.456791952011413E-4 0.0 10 0.0 0.0 0.0 5.456791952011413E-4 0.0 11 0.0 0.0 0.0 6.236333659441614E-4 0.0 12 0.0 0.0 0.0 8.57495878173222E-4 0.0 13 0.0 0.0 0.0 8.57495878173222E-4 0.0 14 0.0 0.0 0.0 8.57495878173222E-4 0.0 15 0.0 0.0 0.0 0.0010913583904022825 0.0 16 0.0 0.0 0.0 0.0010913583904022825 0.0 17 0.0 0.0 0.0 0.002182716780804565 0.0 18 0.0 0.0 0.0 0.002572487634519666 0.0 19 0.0 0.0 0.0 0.0028843043174917467 0.0 20 0.0 0.0 0.0 0.003507937683435908 0.0 21 0.0 0.0 0.0 0.004053616878637049 0.0 22 0.0 0.0 0.0 0.00467725024458121 0.0 23 0.0 0.0 0.0 0.005300883610525372 0.0 24 0.0 0.0 0.0 0.006859967025385776 0.0 25 0.0 0.0 0.0 0.007951325415788059 0.0 26 0.0 0.0 0.0 0.00857495878173222 0.0 27 0.0 0.0 0.0 0.009666317172134502 0.0 28 0.0 0.0 0.0 0.010913583904022825 0.0 29 0.0 0.0 0.0 0.01294039234334135 0.0 30 0.0 7.795417074302018E-5 0.0 0.015123109124145915 0.0 31 0.0 7.795417074302018E-5 0.0 0.020112176051699206 0.0 32 0.0 7.795417074302018E-5 0.0 0.027439868101543103 0.0 33 0.0 7.795417074302018E-5 0.0 0.0339880184439568 0.0 34 0.0 7.795417074302018E-5 0.0 0.042718885567175055 0.0 35 0.0 7.795417074302018E-5 0.0 0.05199543188559446 0.0 36 0.0 7.795417074302018E-5 0.0 0.06462400754596373 0.0 37 0.0 7.795417074302018E-5 0.0 0.08372277937800367 0.0 38 0.0 7.795417074302018E-5 0.0 0.10734289311313878 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 645 0.0 28.318933 1 GTATCAA 1655 0.0 25.131725 1 CTAGCGC 65 1.8140378E-5 23.691406 3 ATCGTGC 85 2.3537541E-7 23.29323 8 ATTCGGT 65 4.933656E-4 20.30692 11 CCGATCG 55 0.0044847485 19.999237 9 CGTTCGC 55 0.0044847485 19.999237 15 CCGACAC 80 8.989058E-5 19.250017 22 CGATCGC 80 8.991749E-5 19.249266 10 TATCAAC 2195 0.0 18.44193 2 GTCCTAT 180 1.4551915E-11 18.339067 1 CGTGCAC 120 3.1636046E-7 18.332636 10 TCGGCAA 60 0.007413972 18.332636 13 TGCGATA 60 0.007413972 18.332636 12 ATCAACG 2235 0.0 17.914307 3 TCAACGC 2255 0.0 17.852978 4 CAACGCA 2305 0.0 17.370272 5 AACGCAG 2390 0.0 16.7525 6 CCGTACC 80 0.0019884284 16.500015 2 GCGTATA 85 0.002973868 15.53427 1 >>END_MODULE