##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062157_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1258041 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.35187644917773 32.0 32.0 32.0 32.0 32.0 2 31.556445298682636 32.0 32.0 32.0 32.0 32.0 3 31.62831736008604 32.0 32.0 32.0 32.0 32.0 4 31.68780111300029 32.0 32.0 32.0 32.0 32.0 5 31.674686278110173 32.0 32.0 32.0 32.0 32.0 6 35.333908036383555 36.0 36.0 36.0 36.0 36.0 7 35.33864238128964 36.0 36.0 36.0 36.0 36.0 8 35.30320871895272 36.0 36.0 36.0 36.0 36.0 9 35.36448573615645 36.0 36.0 36.0 36.0 36.0 10 35.27253642766809 36.0 36.0 36.0 36.0 36.0 11 35.362127307456596 36.0 36.0 36.0 36.0 36.0 12 35.310089257822284 36.0 36.0 36.0 36.0 36.0 13 35.328542551474875 36.0 36.0 36.0 36.0 36.0 14 35.30235262602729 36.0 36.0 36.0 36.0 36.0 15 35.28495891628333 36.0 36.0 36.0 36.0 36.0 16 35.2942853213846 36.0 36.0 36.0 36.0 36.0 17 35.28007751734641 36.0 36.0 36.0 36.0 36.0 18 35.27379075880675 36.0 36.0 36.0 36.0 36.0 19 35.269222545211164 36.0 36.0 36.0 36.0 36.0 20 35.26714948081978 36.0 36.0 36.0 36.0 36.0 21 35.25642010077573 36.0 36.0 36.0 36.0 36.0 22 35.24632424539423 36.0 36.0 36.0 36.0 36.0 23 35.21530697330214 36.0 36.0 36.0 36.0 36.0 24 35.20869510612134 36.0 36.0 36.0 36.0 36.0 25 35.19857063482033 36.0 36.0 36.0 36.0 36.0 26 35.1516723222852 36.0 36.0 36.0 36.0 36.0 27 35.14274495028381 36.0 36.0 36.0 36.0 36.0 28 35.129307391412524 36.0 36.0 36.0 36.0 36.0 29 35.122287747378664 36.0 36.0 36.0 36.0 36.0 30 35.103196159743604 36.0 36.0 36.0 36.0 36.0 31 35.09562645414577 36.0 36.0 36.0 36.0 36.0 32 35.07414146279811 36.0 36.0 36.0 36.0 36.0 33 35.05780018298291 36.0 36.0 36.0 36.0 36.0 34 35.05044350700812 36.0 36.0 36.0 36.0 36.0 35 35.03491937067234 36.0 36.0 36.0 36.0 36.0 36 35.00805935577616 36.0 36.0 36.0 36.0 36.0 37 35.00859034006046 36.0 36.0 36.0 36.0 36.0 38 34.999018314983374 36.0 36.0 36.0 36.0 36.0 39 34.9823559009603 36.0 36.0 36.0 36.0 36.0 40 34.9672307977244 36.0 36.0 36.0 36.0 36.0 41 34.94270774958845 36.0 36.0 36.0 36.0 36.0 42 34.92005347997402 36.0 36.0 36.0 36.0 36.0 43 34.9156911420216 36.0 36.0 36.0 36.0 36.0 44 34.88300699261789 36.0 36.0 36.0 36.0 36.0 45 34.86152200127023 36.0 36.0 36.0 36.0 36.0 46 34.848524809604775 36.0 36.0 36.0 36.0 36.0 47 34.82596433661542 36.0 36.0 36.0 36.0 36.0 48 34.80464070725835 36.0 36.0 36.0 36.0 36.0 49 34.78729151116696 36.0 36.0 36.0 32.0 36.0 50 34.41377983706413 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 6.0 21 24.0 22 61.0 23 190.0 24 517.0 25 1219.0 26 2693.0 27 5156.0 28 8703.0 29 14305.0 30 20791.0 31 30723.0 32 45711.0 33 76176.0 34 176812.0 35 874953.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.378608754838446 17.960999844152045 12.638156032429096 26.022235368580414 2 15.882932304588412 19.977694274837376 37.48975534451057 26.649618076063636 3 18.764998541380674 22.83069125837911 28.797040473308062 29.607269726932156 4 13.020879287717968 16.216959542654017 35.325001331435146 35.43715983819287 5 14.6374402742041 36.40739848701274 33.67632692416225 15.278834314620907 6 34.32676012451154 34.980874951114274 16.729012524283885 13.963352400090297 7 30.328343829811587 30.764100693061675 19.91206963842991 18.995485838696833 8 27.80346586478501 33.76137979604798 19.136021798971576 19.29913254019543 9 26.874561321928297 15.193542976739232 18.77093035918543 39.16096534214704 10 16.181679437855713 27.649756764490796 31.83928968872214 24.329274108931354 11 36.18586357678327 22.011842221358446 22.31994028811462 19.48235391374367 12 24.11384048691577 24.20827302130853 28.7755327529071 22.902353738868605 13 29.286008961552128 20.146879155766783 25.19886076844872 25.368251114232365 14 23.170151052310693 19.52265466705775 25.832146965003528 31.47504731562803 15 24.945609880759054 27.32200301897951 22.433211636186737 25.299175464074704 16 25.094890197633923 26.618697601732226 23.690396038895642 24.596016161738206 17 23.82728384845963 26.41432194976157 25.2743750004968 24.484019201281992 18 23.958398745984823 26.2587248884971 26.01644305144753 23.76643331407055 19 25.019136896174288 25.634856097694747 26.023794137075022 23.322212869055935 20 25.347604209723062 25.186878000699505 25.493227560331945 23.972290229245495 21 25.24053289243585 25.255874217036023 25.57136498044577 23.93222791008235 22 25.378823106719096 24.946722722073446 25.345914799279196 24.328539371928258 23 24.720835585513974 25.21358621347493 25.590919207656356 24.47465899335474 24 24.33459350666281 25.23226828019726 25.80236687895659 24.63077133418334 25 24.60605260898734 24.8717047842828 25.82064424229513 24.70159836443472 26 24.326290068471916 25.309570329577735 25.854229694904905 24.509909907045436 27 24.62944312537211 25.6394277124954 25.630286501451867 24.10084266068063 28 25.097693200426068 25.07599243255274 25.459213684997057 24.367100682024134 29 24.46031041987603 25.56790812360199 25.59612666708001 24.375654789441974 30 24.64140219788955 25.392818107748255 25.355060511516065 24.61071918284613 31 24.4481680586501 25.256331888489765 25.58716476542423 24.7083352874359 32 24.602315362407314 25.368591577956686 25.572084016940742 24.457009042695258 33 24.613266541445125 25.383832113045962 25.34543896562661 24.657462379882308 34 24.59418791080997 25.254504452585902 25.851229657727583 24.300077978876548 35 24.824687330589377 25.263386320603985 25.66575890394408 24.246167444862557 36 24.629462703034406 25.41743572133751 25.41059967981889 24.54250189580919 37 24.997953131073537 25.09572589921138 25.60692644546704 24.299394524248044 38 24.76612447448056 25.31547064046402 25.637081780323534 24.281323104731882 39 24.808887553466576 25.505691840172208 25.321435356418654 24.36398524994257 40 24.717834661723522 25.406525552864416 25.358752789062976 24.51688699634908 41 24.500567554935184 25.507381393736868 25.499909381985137 24.49214166934281 42 24.79600378063719 25.3897291629736 25.50491300003418 24.309354056355023 43 24.678019132046735 24.862837183643165 25.64598877260146 24.81315491170864 44 24.419609392450965 25.43305227629176 25.645613753379404 24.501724577877866 45 24.657159663598353 25.61676284955724 25.43441280742754 24.29166467941686 46 24.612444694574144 25.383898748344613 25.394232496617686 24.609424060463557 47 24.535920873048237 25.536851694197825 25.45927001682791 24.467957415926023 48 24.644730597803317 25.55292613846385 25.321127609223925 24.481215654508905 49 24.657548402687464 25.388159505496077 25.310734283633867 24.64355780818259 50 24.585915770613592 25.524615327137866 25.303155680726096 24.586313221522442 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 54.0 1 59.5 2 65.0 3 134.5 4 204.0 5 237.0 6 270.0 7 203.0 8 136.0 9 206.5 10 277.0 11 470.5 12 664.0 13 1177.5 14 1691.0 15 2113.5 16 2536.0 17 2397.5 18 2259.0 19 2082.0 20 1905.0 21 2519.0 22 3133.0 23 4128.5 24 5124.0 25 6577.5 26 8031.0 27 9843.5 28 11656.0 29 13760.0 30 15864.0 31 18844.0 32 21824.0 33 25065.5 34 28307.0 35 32887.5 36 37468.0 37 42310.0 38 47152.0 39 53181.0 40 59210.0 41 63433.5 42 67657.0 43 72489.5 44 77322.0 45 82994.0 46 88666.0 47 91342.0 48 94018.0 49 96607.0 50 99196.0 51 100470.0 52 101744.0 53 101163.5 54 100583.0 55 97339.0 56 94095.0 57 87117.0 58 80139.0 59 73046.0 60 65953.0 61 56874.5 62 47796.0 63 40792.0 64 33788.0 65 28125.5 66 22463.0 67 18434.5 68 14406.0 69 11644.0 70 8882.0 71 7177.0 72 5472.0 73 4472.0 74 3472.0 75 2815.0 76 2158.0 77 1700.5 78 1243.0 79 947.5 80 652.0 81 457.0 82 262.0 83 193.5 84 125.0 85 93.0 86 61.0 87 43.0 88 25.0 89 16.5 90 8.0 91 8.0 92 8.0 93 7.5 94 7.0 95 5.5 96 4.0 97 4.5 98 5.0 99 3.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03219290945207668 2 0.005405229241336331 3 1.589773306275392E-4 4 0.0 5 0.0 6 3.974433265688479E-4 7 0.0 8 0.0 9 0.0 10 7.94886653137696E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 6.359093225101568E-4 17 0.0 18 1.589773306275392E-4 19 0.0 20 7.94886653137696E-5 21 7.94886653137696E-5 22 0.0 23 7.94886653137696E-5 24 0.0010333526490790045 25 3.974433265688479E-4 26 5.564206571963871E-4 27 1.589773306275392E-4 28 0.0016692619715891611 29 2.3846599594130874E-4 30 0.0012718186450203135 31 3.179546612550784E-4 32 7.153979878239263E-4 33 3.179546612550784E-4 34 6.359093225101568E-4 35 2.3846599594130874E-4 36 2.3846599594130874E-4 37 0.0017487506369029309 38 0.0 39 9.53863983765235E-4 40 1.589773306275392E-4 41 0.0010333526490790045 42 0.004133410596316018 43 0.0037359672697471705 44 0.004133410596316018 45 0.0016692619715891611 46 0.0021461939634717787 47 9.53863983765235E-4 48 0.004133410596316018 49 0.004212899261629788 50 0.00190772796753047 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1258041.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.09273446978944 #Duplication Level Percentage of deduplicated Percentage of total 1 55.40983623503097 19.444826700104596 2 16.163111962880112 11.344155926376581 3 8.367203989601451 8.808842035849398 4 5.191110380766638 7.286810327824448 5 3.4662885093137517 6.082077112651488 6 2.4260572397394773 5.108218951361267 7 1.7660880416982039 4.338380108830984 8 1.3457260159241398 3.7780164596730774 9 1.015033505637909 3.2058271162161596 >10 4.723821696178384 26.83446850014828 >50 0.10273864543704495 2.3860393724650115 >100 0.02230109243709595 1.1866861387775034 >500 4.5512356990118005E-4 0.10245736873154478 >1k 2.2756178495059003E-4 0.09319388098964361 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 7.948866531376958E-5 0.0 16 0.0 0.0 0.0 7.948866531376958E-5 0.0 17 0.0 0.0 0.0 7.948866531376958E-5 0.0 18 0.0 0.0 0.0 1.5897733062753916E-4 0.0 19 0.0 0.0 0.0 2.3846599594130874E-4 0.0 20 0.0 0.0 0.0 5.564206571963871E-4 0.0 21 0.0 0.0 0.0 5.564206571963871E-4 0.0 22 0.0 0.0 0.0 7.948866531376958E-4 0.0 23 0.0 0.0 0.0 9.53863983765235E-4 0.0 24 0.0 0.0 0.0 0.0014307959756478526 0.0 25 0.0 0.0 0.0 0.0018282393022167004 0.0 26 0.0 0.0 0.0 0.0033385239431783227 0.0 27 0.0 0.0 0.0 0.004212899261629788 0.0 28 0.0 0.0 0.0 0.00564369523727764 0.0 29 0.0 0.0 0.0 0.007471934539494341 0.0 30 0.0 0.0 0.0 0.010333526490790047 0.0 31 0.0 0.0 0.0 0.01677210838120538 0.0 32 0.0 0.0 0.0 0.026151770888230192 0.0 33 0.0 0.0 0.0 0.033385239431783224 0.0 34 0.0 0.0 0.0 0.04268541327349427 0.0 35 0.0 0.0 0.0 0.05166763245395023 0.0 36 0.0 0.0 0.0 0.06541917155323236 0.0 37 0.0 0.0 0.0 0.08664264519200884 0.0 38 0.0 0.0 0.0 0.11462265538245574 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1465 0.0 29.59953 1 GGTATCA 595 0.0 27.746004 1 TAGCGCC 50 0.0025807803 21.999582 33 TATGTCG 50 0.0025813761 21.998707 5 ATCAACG 2135 0.0 19.88642 3 CGAAAGT 100 1.1241445E-6 19.798836 20 TCAACGC 2185 0.0 19.532034 4 CAACGCA 2210 0.0 19.211542 5 GTCTAGT 115 2.010147E-7 19.140724 1 TATCAAC 2280 0.0 18.914928 2 AACGCAG 2285 0.0 18.580967 6 TATTGCG 60 0.007413075 18.332987 29 CCGTACA 75 0.0012896986 17.602465 2 GCATATA 190 6.1299943E-10 16.219244 1 GTATTAG 150 1.8265382E-7 16.14201 1 TGGACCG 125 9.446056E-6 15.839069 5 TACCGTA 85 0.0029811973 15.5285 7 CTAGAAC 200 1.2769306E-9 15.399095 3 ACGCAGA 2755 0.0 15.3312235 7 CCTATAC 160 3.8262988E-7 15.124112 3 >>END_MODULE