FastQCFastQC Report
Thu 2 Feb 2017
SRR4062156_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4062156_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45297
Sequences flagged as poor quality0
Sequence length25
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCCTGGAGCATACCACACACACGC720.1589509239022452No Hit
GTATCAACGCAGAGTACTTTTTTTT530.11700554120581937No Hit
TCCTTAAGGTGCTCAACCGTGCACG500.11038258604322582No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)