##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062154_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 912774 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.26366329452855 32.0 32.0 32.0 32.0 32.0 2 31.461103186550012 32.0 32.0 32.0 32.0 32.0 3 31.582433329608424 32.0 32.0 32.0 32.0 32.0 4 31.667664723140668 32.0 32.0 32.0 32.0 32.0 5 31.635826612063884 32.0 32.0 32.0 32.0 32.0 6 35.29834876979405 36.0 36.0 36.0 36.0 36.0 7 35.291868523862426 36.0 36.0 36.0 36.0 36.0 8 35.252109503557286 36.0 36.0 36.0 36.0 36.0 9 35.325775054942405 36.0 36.0 36.0 36.0 36.0 10 35.211953890010015 36.0 36.0 36.0 36.0 36.0 11 35.3329652246887 36.0 36.0 36.0 36.0 36.0 12 35.251536524922926 36.0 36.0 36.0 36.0 36.0 13 35.28877465834916 36.0 36.0 36.0 36.0 36.0 14 35.248410888127836 36.0 36.0 36.0 36.0 36.0 15 35.226888583592434 36.0 36.0 36.0 36.0 36.0 16 35.24454903404347 36.0 36.0 36.0 36.0 36.0 17 35.22132422702663 36.0 36.0 36.0 36.0 36.0 18 35.22303987624538 36.0 36.0 36.0 36.0 36.0 19 35.21440904320237 36.0 36.0 36.0 36.0 36.0 20 35.20565112503205 36.0 36.0 36.0 36.0 36.0 21 35.20108153825591 36.0 36.0 36.0 36.0 36.0 22 35.17817006181158 36.0 36.0 36.0 36.0 36.0 23 35.15246928593496 36.0 36.0 36.0 36.0 36.0 24 35.136153089373714 36.0 36.0 36.0 36.0 36.0 25 35.12779286000697 36.0 36.0 36.0 36.0 36.0 26 35.08095541722266 36.0 36.0 36.0 36.0 36.0 27 35.075581688347825 36.0 36.0 36.0 36.0 36.0 28 35.05229114764443 36.0 36.0 36.0 36.0 36.0 29 35.035887306167794 36.0 36.0 36.0 36.0 36.0 30 35.01194381084474 36.0 36.0 36.0 36.0 36.0 31 35.01259347878007 36.0 36.0 36.0 36.0 36.0 32 34.98484509856766 36.0 36.0 36.0 36.0 36.0 33 34.966331205753015 36.0 36.0 36.0 36.0 36.0 34 34.94275691463604 36.0 36.0 36.0 36.0 36.0 35 34.933267161422215 36.0 36.0 36.0 36.0 36.0 36 34.914048822600115 36.0 36.0 36.0 36.0 36.0 37 34.89670937165169 36.0 36.0 36.0 36.0 36.0 38 34.892727005808666 36.0 36.0 36.0 32.0 36.0 39 34.87513448016705 36.0 36.0 36.0 32.0 36.0 40 34.85493890053836 36.0 36.0 36.0 32.0 36.0 41 34.82111234544367 36.0 36.0 36.0 32.0 36.0 42 34.80321306259819 36.0 36.0 36.0 32.0 36.0 43 34.795325020213106 36.0 36.0 36.0 32.0 36.0 44 34.752704393420494 36.0 36.0 36.0 32.0 36.0 45 34.730541185441304 36.0 36.0 36.0 32.0 36.0 46 34.706150701049765 36.0 36.0 36.0 32.0 36.0 47 34.677595987615774 36.0 36.0 36.0 32.0 36.0 48 34.65013683562415 36.0 36.0 36.0 32.0 36.0 49 34.64600766454785 36.0 36.0 36.0 32.0 36.0 50 34.23446986877365 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 7.0 21 20.0 22 69.0 23 171.0 24 438.0 25 1041.0 26 2229.0 27 4227.0 28 7027.0 29 11070.0 30 16489.0 31 24122.0 32 36195.0 33 62365.0 34 143167.0 35 604135.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.93030769298211 17.830214319844643 11.854771893370506 26.38470609380274 2 16.35655475028349 19.94850641204731 36.9545377354873 26.740401102181906 3 18.659773371415174 23.439285428656255 28.39408789280115 29.506853307127418 4 12.688587414395474 15.899352851147 35.224968310850564 36.187091423606965 5 14.645136693201167 36.5410276804554 33.10326543043514 15.710570195908296 6 34.74474513954166 34.82614535470993 16.579350419709588 13.849759086038823 7 30.760078617489107 30.201123169590723 20.133680407198277 18.9051178057219 8 28.268881453678567 32.9254558083381 19.034284499777602 19.771378238205735 9 27.28342393626462 14.330491446951822 18.51433103922767 39.87175357755589 10 16.438807896377302 26.605629219970357 31.030716289811377 25.924846593840968 11 37.04684839839873 21.386454916551084 21.989561490577074 19.57713519447311 12 24.42346079095154 23.79767609506844 28.47539478556576 23.30346832841426 13 29.421302534910065 19.4300012927625 25.181698865217456 25.966997307109974 14 23.752210295209984 19.312885774572898 25.17611150186136 31.758792428355758 15 25.32280717899502 26.834901081757366 22.088052464246353 25.75423927500126 16 25.86015927394395 25.81688426509723 23.40279611335642 24.920160347602398 17 24.12995988053998 25.988251199091998 24.952288299184683 24.929500621183337 18 24.7537996851353 25.172523727147933 25.895266402489998 24.178410185226777 19 25.52307581066069 24.895976441046745 25.4980970097746 24.08285073851797 20 25.848348002901044 24.2147563361796 25.10544778882834 24.83144787209101 21 26.457808833292795 24.194050224918765 24.823778941994405 24.524361999794035 22 25.848895783622233 24.158444478041663 25.229794012537603 24.7628657257985 23 24.513954166091498 24.252005425220265 25.518145784170017 25.715894624518228 24 24.59272146420879 24.722108404563713 25.50774240057145 25.17742773065605 25 24.897099278791114 24.326092029453108 25.458903801931037 25.317904889824742 26 24.745473409051318 24.99898660455557 25.69423065756765 24.56130932882546 27 25.125579143070937 24.7528679153917 25.13686346301537 24.984689478521997 28 24.854452748909353 24.38762788109058 25.73485749844976 25.023061871550308 29 24.664784485922535 24.81969738302378 25.56862564652032 24.94689248453336 30 24.731337118917217 24.933580641591828 25.579751983268345 24.755330256222603 31 25.051162831462843 24.72928617442253 25.038344734501056 25.18120625961357 32 25.059872695202518 24.641256833594444 24.953712326215804 25.345158144987234 33 24.66043073093668 24.479553536801006 25.365643631391777 25.49437210087053 34 25.197668189143563 24.57779477128336 25.529954522895764 24.694582516677315 35 25.658543425959607 24.28821217127607 25.54372833522501 24.50951606753932 36 24.689215586384755 24.97943076631488 25.20106357454389 25.130290072756473 37 25.586738215386774 24.67598202371275 25.143685401826115 24.593594359074366 38 24.886773724930816 24.53411249663115 25.382843946037028 25.196269832401008 39 25.27789159543629 24.69822495579371 24.81534150045028 25.208541948319724 40 25.43074784201548 24.77614916304492 25.261592969993636 24.53151002494596 41 24.610879275343105 25.13730289242662 25.523931184765374 24.727886647464896 42 25.69971711115932 24.943849523296148 25.09625013421333 24.260183231331197 43 25.281021977781187 24.23351666411026 25.266121787146396 25.219339570962156 44 24.820210882445746 24.890877537425936 25.005149353153595 25.28376222697472 45 24.98929061704671 25.01777593231889 25.04439874620789 24.94853470442651 46 24.96836486621214 24.820679462416365 25.027745792664152 25.183209878707334 47 24.870859138681126 24.9577382080562 25.29802369289728 24.873378960365397 48 25.509291823064228 25.29827836684788 24.445788386152433 24.746641423935458 49 24.986743154647126 25.301511061248817 24.75469358061915 24.957052203484906 50 25.080168499011247 25.344968310572817 24.717972314889376 24.85689087552656 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 270.0 1 164.0 2 58.0 3 160.0 4 262.0 5 264.0 6 266.0 7 203.5 8 141.0 9 192.5 10 244.0 11 419.0 12 594.0 13 1075.5 14 1557.0 15 1921.5 16 2286.0 17 2235.5 18 2185.0 19 2150.0 20 2115.0 21 2344.0 22 2573.0 23 3094.5 24 3616.0 25 4371.0 26 5126.0 27 6482.5 28 7839.0 29 9236.5 30 10634.0 31 12250.5 32 13867.0 33 15898.5 34 17930.0 35 20650.0 36 23370.0 37 27380.0 38 31390.0 39 35239.0 40 39088.0 41 42839.5 42 46591.0 43 48812.0 44 51033.0 45 55300.5 46 59568.0 47 63016.0 48 66464.0 49 69007.5 50 71551.0 51 70391.5 52 69232.0 53 69131.0 54 69030.0 55 68600.5 56 68171.0 57 65362.5 58 62554.0 59 57405.5 60 52257.0 61 46149.0 62 40041.0 63 34571.0 64 29101.0 65 24478.5 66 19856.0 67 17105.5 68 14355.0 69 12656.0 70 10957.0 71 8543.5 72 6130.0 73 5279.0 74 4428.0 75 3258.5 76 2089.0 77 1829.0 78 1569.0 79 1302.0 80 1035.0 81 819.0 82 603.0 83 510.5 84 418.0 85 308.0 86 198.0 87 135.5 88 73.0 89 48.5 90 24.0 91 15.0 92 6.0 93 8.0 94 10.0 95 9.0 96 8.0 97 7.0 98 6.0 99 5.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0335241801365946 2 0.004272689625252253 3 3.286684327117118E-4 4 1.0955614423723727E-4 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 1.0955614423723727E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 7.668930096606608E-4 17 0.0 18 1.0955614423723727E-4 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 8.764491538978982E-4 25 1.0955614423723727E-4 26 1.0955614423723727E-4 27 3.286684327117118E-4 28 0.0013146737308468472 29 3.286684327117118E-4 30 0.0014242298750840844 31 2.1911228847447454E-4 32 4.382245769489491E-4 33 0.0 34 7.668930096606608E-4 35 2.1911228847447454E-4 36 3.286684327117118E-4 37 0.0017528983077957964 38 0.0 39 8.764491538978982E-4 40 1.0955614423723727E-4 41 0.00120511758660961 42 0.005258694923387389 43 0.003724908904066067 44 0.004163133481015016 45 0.002519791317456457 46 0.002519791317456457 47 0.00120511758660961 48 0.0039440211925405415 49 0.004163133481015016 50 9.860052981351354E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 912774.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.86568593136755 #Duplication Level Percentage of deduplicated Percentage of total 1 78.96077550626785 47.2704098735545 2 12.986320449863275 15.548699629112212 3 3.605642986820681 6.475628718889347 4 1.446206959602812 3.463126865413596 5 0.7403939013076435 2.2162094380591664 6 0.45805535246237516 1.6453078721816652 7 0.3429158804302683 1.4370226079101782 8 0.20893721272786905 1.0006535645233552 9 0.16447759620120755 0.8861907705235005 >10 0.9648022991764751 10.381738000840176 >50 0.06883759644575822 2.83924609468781 >100 0.050057756588244746 5.802221148763254 >500 0.002576502105544252 1.0335454155412813 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 2.1911228847447452E-4 13 0.0 0.0 0.0 0.0 2.1911228847447452E-4 14 0.0 0.0 0.0 0.0 3.286684327117118E-4 15 0.0 1.0955614423723726E-4 0.0 0.0 4.3822457694894904E-4 16 0.0 1.0955614423723726E-4 0.0 1.0955614423723726E-4 6.573368654234236E-4 17 0.0 1.0955614423723726E-4 0.0 1.0955614423723726E-4 6.573368654234236E-4 18 0.0 1.0955614423723726E-4 0.0 2.1911228847447452E-4 6.573368654234236E-4 19 0.0 1.0955614423723726E-4 0.0 3.286684327117118E-4 6.573368654234236E-4 20 0.0 1.0955614423723726E-4 0.0 5.477807211861863E-4 7.668930096606608E-4 21 0.0 1.0955614423723726E-4 0.0 6.573368654234236E-4 7.668930096606608E-4 22 0.0 1.0955614423723726E-4 0.0 8.764491538978981E-4 0.0010955614423723726 23 0.0 1.0955614423723726E-4 0.0 0.0019720105962702707 0.0010955614423723726 24 0.0 2.1911228847447452E-4 0.0 0.002958015894405406 0.0010955614423723726 25 0.0 2.1911228847447452E-4 0.0 0.0036153527598288297 0.0010955614423723726 26 0.0 2.1911228847447452E-4 0.0 0.004163133481015015 0.0010955614423723726 27 0.0 2.1911228847447452E-4 0.0 0.005149138779150151 0.0010955614423723726 28 0.0 2.1911228847447452E-4 0.0 0.006463812509996998 0.0010955614423723726 29 0.0 2.1911228847447452E-4 0.0 0.00876449153897898 0.0010955614423723726 30 0.0 2.1911228847447452E-4 0.0 0.012708512731519522 0.0010955614423723726 31 0.0 2.1911228847447452E-4 0.0 0.022130341135921924 0.0013146737308468472 32 0.0 2.1911228847447452E-4 0.0 0.030894832674900907 0.0013146737308468472 33 0.0 2.1911228847447452E-4 0.0 0.039111543492693704 0.0013146737308468472 34 0.0 2.1911228847447452E-4 0.0 0.04721869816624926 0.0013146737308468472 35 0.0 2.1911228847447452E-4 0.0 0.05740741958031232 0.0013146737308468472 36 0.0 2.1911228847447452E-4 0.0 0.07219749905233935 0.0013146737308468472 37 0.0 2.1911228847447452E-4 0.0 0.09487562090944747 0.0013146737308468472 38 0.0 2.1911228847447452E-4 0.0 0.1229219938341802 0.0013146737308468472 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGCCGAA 30 0.005744531 29.333076 33 GTATCAA 1260 0.0 23.578974 1 TTATACT 85 6.1111914E-6 20.7057 4 GGTATCA 700 0.0 20.43511 1 ACCGTCG 195 0.0 20.307516 8 CGTCGTA 195 0.0 19.179321 10 TAATACC 95 1.596531E-5 18.526154 4 ATACGGC 60 0.0074111195 18.333172 6 TACCGTC 230 0.0 18.173754 7 TGCACCG 85 1.4304422E-4 18.117489 5 GCACCGT 75 0.0012906174 17.599846 6 TCAACGC 1730 0.0 17.548979 4 TACGAAT 140 8.36626E-8 17.285564 41 CGGTCGG 205 5.456968E-12 17.170582 10 TAGACTG 180 2.8558134E-10 17.110962 5 ATTATAC 90 2.2147712E-4 17.110962 3 ATCAACG 1740 0.0 17.068817 3 GTAATAC 155 1.4379111E-8 17.03211 3 AACGCAG 1805 0.0 16.697914 6 CAACGCA 1795 0.0 16.668379 5 >>END_MODULE