##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062152_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1180180 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.283988883051737 32.0 32.0 32.0 32.0 32.0 2 31.47044349167076 32.0 32.0 32.0 32.0 32.0 3 31.585220051178634 32.0 32.0 32.0 32.0 32.0 4 31.65931891745327 32.0 32.0 32.0 32.0 32.0 5 31.631286752868206 32.0 32.0 32.0 32.0 32.0 6 35.278570218102324 36.0 36.0 36.0 36.0 36.0 7 35.284693012930234 36.0 36.0 36.0 36.0 36.0 8 35.24019471606026 36.0 36.0 36.0 36.0 36.0 9 35.31583656730329 36.0 36.0 36.0 36.0 36.0 10 35.20169465674728 36.0 36.0 36.0 36.0 36.0 11 35.32232286600349 36.0 36.0 36.0 36.0 36.0 12 35.24472622820248 36.0 36.0 36.0 36.0 36.0 13 35.28061651612466 36.0 36.0 36.0 36.0 36.0 14 35.244151739565154 36.0 36.0 36.0 36.0 36.0 15 35.22092731617211 36.0 36.0 36.0 36.0 36.0 16 35.22904387466318 36.0 36.0 36.0 36.0 36.0 17 35.21286752868207 36.0 36.0 36.0 36.0 36.0 18 35.210363673337966 36.0 36.0 36.0 36.0 36.0 19 35.203506244810114 36.0 36.0 36.0 36.0 36.0 20 35.20783016150079 36.0 36.0 36.0 36.0 36.0 21 35.196880136928264 36.0 36.0 36.0 36.0 36.0 22 35.18152315748445 36.0 36.0 36.0 36.0 36.0 23 35.15073548102832 36.0 36.0 36.0 36.0 36.0 24 35.135499669541936 36.0 36.0 36.0 36.0 36.0 25 35.117127895744716 36.0 36.0 36.0 36.0 36.0 26 35.073800606687115 36.0 36.0 36.0 36.0 36.0 27 35.06483502516565 36.0 36.0 36.0 36.0 36.0 28 35.052292870579066 36.0 36.0 36.0 36.0 36.0 29 35.03902879221813 36.0 36.0 36.0 36.0 36.0 30 35.01717195682015 36.0 36.0 36.0 36.0 36.0 31 35.01196681862089 36.0 36.0 36.0 36.0 36.0 32 34.989198257892866 36.0 36.0 36.0 36.0 36.0 33 34.9729075225813 36.0 36.0 36.0 36.0 36.0 34 34.96551288786456 36.0 36.0 36.0 36.0 36.0 35 34.95128200782931 36.0 36.0 36.0 36.0 36.0 36 34.924916538155195 36.0 36.0 36.0 36.0 36.0 37 34.916780491111524 36.0 36.0 36.0 36.0 36.0 38 34.905980443661136 36.0 36.0 36.0 36.0 36.0 39 34.88518022674507 36.0 36.0 36.0 32.0 36.0 40 34.86423088003525 36.0 36.0 36.0 32.0 36.0 41 34.8469818163331 36.0 36.0 36.0 32.0 36.0 42 34.81839041502144 36.0 36.0 36.0 32.0 36.0 43 34.81465369689369 36.0 36.0 36.0 32.0 36.0 44 34.77747546984358 36.0 36.0 36.0 32.0 36.0 45 34.75413750444847 36.0 36.0 36.0 32.0 36.0 46 34.73497178396516 36.0 36.0 36.0 32.0 36.0 47 34.713738582250166 36.0 36.0 36.0 32.0 36.0 48 34.68816790659052 36.0 36.0 36.0 32.0 36.0 49 34.674444576251084 36.0 36.0 36.0 32.0 36.0 50 34.26354200206748 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 4.0 20 14.0 21 27.0 22 81.0 23 232.0 24 605.0 25 1340.0 26 2786.0 27 5354.0 28 8871.0 29 14201.0 30 21083.0 31 31254.0 32 47531.0 33 79867.0 34 183441.0 35 783489.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.888170307697784 17.62333085267428 11.998959140324498 26.48953969930344 2 16.529872436485167 19.349590464682347 36.810471495223354 27.31006560360913 3 18.954376296416804 22.5399431949133 28.10224915605808 30.403431352611815 4 12.990645494755038 15.432561134742159 34.38907624260706 37.187717127895745 5 15.054750169253985 36.030297098999384 32.906279471164964 16.008673260581656 6 35.90427537564281 34.11437436926834 15.852537373631243 14.12881288145761 7 31.39834601501466 29.669203002931756 19.629209103696045 19.30324187835754 8 28.59724787744242 33.01411649070481 18.537765425613042 19.850870206239726 9 26.973681980714808 14.59175718958125 18.38846616617804 40.046094663525906 10 16.73466482626788 26.638162516025112 30.65560393804669 25.971568719660322 11 37.410140825975695 21.240658204680642 21.377078072836348 19.97212289650731 12 24.631412157467505 23.29610737345151 28.246199732244232 23.826280736836754 13 29.691487739158433 19.306970123201545 24.800369435170904 26.201172702469115 14 23.637750173702315 19.098781541798708 24.834601501465876 32.428866783033094 15 25.443406937924724 26.802691114914673 21.7724414919758 25.981460455184802 16 26.05923029928663 25.66903326885126 23.143301871844212 25.128434560017897 17 24.47245335457303 25.879357386161434 24.664966361063566 24.98322289820197 18 25.001143895242922 25.013938575367444 25.451160757106134 24.533756772283503 19 25.720313850429594 24.89366028910844 25.07668321781423 24.30934264264773 20 26.05979775932105 24.186521016321265 24.814900803099192 24.93878042125849 21 26.41599282820657 23.990598036399565 24.72243617281785 24.870972962576015 22 26.117371926316324 23.926434950600754 24.959667169414836 24.996525953668083 23 24.961891374105114 24.07533094555995 25.209989332126735 25.752788348208195 24 24.969093461879677 24.584064512685025 25.17652102957961 25.270320995855684 25 25.2011137303017 24.156186609138622 25.267968052276863 25.37473160828282 26 24.96924187578802 24.8703583194371 25.308598039614434 24.85180176516045 27 25.206303800192682 24.434724621815203 25.070391983575348 25.28857959441677 28 25.104837213164622 24.307404994055908 25.35353167316718 25.23422611961229 29 24.93356923035208 24.624716991364 25.323256870161735 25.118456908122177 30 25.030800856153647 24.772954899412113 25.258311994454996 24.937932249979237 31 25.38267629800665 24.4340881648908 24.81284555256636 25.37038998453619 32 25.253924636472792 24.53174238014257 24.716206861197467 25.49812612218717 33 24.962357341314057 24.483700326306987 25.005910130429587 25.54803220194937 34 25.462453386071367 24.40447290354889 25.096490090859557 25.036583619520187 35 25.625139279955466 24.218401138134364 25.295866636953612 24.86059294495656 36 25.00741413583375 24.74465716188575 24.923104819781422 25.324823882499082 37 25.64607710303933 24.373115193604942 24.941512217400845 25.03929548595488 38 25.090409937467168 24.44898235862326 25.019658018268398 25.440949685641172 39 25.63047959917741 24.365156633815552 24.742474196579654 25.261889570427385 40 25.615796939105795 24.44970165517405 24.989620209832754 24.9448811958874 41 24.875102527775706 24.769948007402338 25.255048433782306 25.09990103103965 42 25.654887698432198 24.64279237979673 24.976993981998532 24.72532593977253 43 25.39266793884074 24.1528913714737 24.984832205210942 25.46960848447462 44 24.952230203391295 24.655316026332493 24.901642942060214 25.490810828216 45 25.22054343801185 24.579185919113876 24.961848167144428 25.238422475729845 46 25.129156763306515 24.62405362007533 24.742512636052044 25.50427698056611 47 25.10837440093275 24.797740660651705 25.116593569729055 24.97729136868649 48 25.645666562441477 25.03709315104941 24.386999136540926 24.930241149968182 49 25.193368854903873 24.81349480734293 24.665036335041624 25.32810000271157 50 25.18484750398674 24.97385952098102 24.71711510792586 25.12417786710638 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 46.0 1 44.0 2 42.0 3 151.0 4 260.0 5 274.5 6 289.0 7 212.5 8 136.0 9 213.0 10 290.0 11 454.0 12 618.0 13 1213.0 14 1808.0 15 2182.5 16 2557.0 17 2407.0 18 2257.0 19 2156.0 20 2055.0 21 2447.0 22 2839.0 23 3446.5 24 4054.0 25 5122.0 26 6190.0 27 7717.0 28 9244.0 29 10776.0 30 12308.0 31 14339.5 32 16371.0 33 18761.5 34 21152.0 35 24561.5 36 27971.0 37 32399.5 38 36828.0 39 41518.5 40 46209.0 41 51235.5 42 56262.0 43 59626.0 44 62990.0 45 69297.0 46 75604.0 47 80457.0 48 85310.0 49 88943.5 50 92577.0 51 93188.5 52 93800.0 53 94263.5 54 94727.0 55 93751.0 56 92775.0 57 88989.5 58 85204.0 59 79193.5 60 73183.0 61 64199.0 62 55215.0 63 47693.0 64 40171.0 65 33963.5 66 27756.0 67 23161.0 68 18566.0 69 15760.0 70 12954.0 71 10113.0 72 7272.0 73 6273.5 74 5275.0 75 3882.0 76 2489.0 77 2151.0 78 1813.0 79 1542.0 80 1271.0 81 963.5 82 656.0 83 540.5 84 425.0 85 322.0 86 219.0 87 150.5 88 82.0 89 50.5 90 19.0 91 16.5 92 14.0 93 11.5 94 9.0 95 7.0 96 5.0 97 8.0 98 11.0 99 6.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.032706875222423694 2 0.005253435916555102 3 3.389313494551678E-4 4 0.0 5 8.473283736379195E-5 6 2.541985120913759E-4 7 0.0 8 0.0 9 0.0 10 8.473283736379195E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 5.931298615465438E-4 17 0.0 18 1.694656747275839E-4 19 0.0 20 1.694656747275839E-4 21 8.473283736379195E-5 22 0.0 23 8.473283736379195E-5 24 7.625955362741277E-4 25 1.694656747275839E-4 26 3.389313494551678E-4 27 2.541985120913759E-4 28 0.0014404582351844634 29 3.389313494551678E-4 30 0.0015251910725482553 31 4.236641868189598E-4 32 5.931298615465438E-4 33 2.541985120913759E-4 34 5.931298615465438E-4 35 2.541985120913759E-4 36 1.694656747275839E-4 37 0.0016099239099120473 38 0.0 39 5.931298615465438E-4 40 1.694656747275839E-4 41 0.0010167940483655036 42 0.004575573217644766 43 0.004067176193462014 44 0.0034740463319154705 45 0.002287786608822383 46 0.0021183209340947993 47 0.0010167940483655036 48 0.0036435120066430544 49 0.004406107542917182 50 0.0015251910725482553 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1180180.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.60260061584156 #Duplication Level Percentage of deduplicated Percentage of total 1 76.64135547250453 44.91382745411926 2 13.713510428954523 16.072947494184 3 4.1862031577049175 7.359671752432682 4 1.8274842965110598 4.283813294406393 5 0.9907310093523793 2.9029706829403543 6 0.5985043703631682 2.1044347549937084 7 0.38243041921153176 1.5687991984281577 8 0.28042400384574045 1.3146860720373719 9 0.2130418641763857 1.1236326552704787 >10 1.0687156164553495 10.813607060240164 >50 0.05754391548917818 2.3031894227748184 >100 0.0370077539703841 4.063384848654151 >500 0.0029025632960827667 1.076973952260476 >1k 1.4512816480413834E-4 0.09806135725786377 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.473283736379197E-5 2 0.0 0.0 0.0 0.0 8.473283736379197E-5 3 0.0 0.0 0.0 0.0 8.473283736379197E-5 4 0.0 0.0 0.0 0.0 8.473283736379197E-5 5 0.0 0.0 0.0 0.0 1.6946567472758394E-4 6 0.0 0.0 0.0 0.0 1.6946567472758394E-4 7 0.0 0.0 0.0 0.0 1.6946567472758394E-4 8 0.0 0.0 0.0 0.0 1.6946567472758394E-4 9 0.0 0.0 0.0 0.0 1.6946567472758394E-4 10 0.0 0.0 0.0 0.0 1.6946567472758394E-4 11 0.0 0.0 0.0 0.0 2.541985120913759E-4 12 0.0 0.0 0.0 0.0 4.236641868189598E-4 13 0.0 0.0 0.0 0.0 5.931298615465437E-4 14 0.0 0.0 0.0 0.0 5.931298615465437E-4 15 0.0 0.0 0.0 0.0 6.778626989103357E-4 16 0.0 0.0 0.0 8.473283736379197E-5 6.778626989103357E-4 17 0.0 0.0 0.0 8.473283736379197E-5 6.778626989103357E-4 18 0.0 0.0 0.0 8.473283736379197E-5 6.778626989103357E-4 19 0.0 0.0 0.0 8.473283736379197E-5 6.778626989103357E-4 20 0.0 0.0 0.0 8.473283736379197E-5 8.473283736379196E-4 21 0.0 0.0 0.0 2.541985120913759E-4 8.473283736379196E-4 22 0.0 0.0 0.0 3.3893134945516787E-4 9.320612110017116E-4 23 0.0 0.0 0.0 5.931298615465437E-4 9.320612110017116E-4 24 0.0 0.0 0.0 0.0013557253978206715 0.0010167940483655036 25 0.0 0.0 0.0 0.0016099239099120473 0.0010167940483655036 26 0.0 0.0 0.0 0.0016946567472758392 0.0010167940483655036 27 0.0 0.0 0.0 0.002033588096731007 0.0010167940483655036 28 0.0 0.0 0.0 0.002711450795641343 0.0010167940483655036 29 0.0 0.0 0.0 0.004067176193462014 0.0010167940483655036 30 0.0 0.0 0.0 0.007032825501194733 0.0011015268857292955 31 0.0 0.0 0.0 0.012286261417749834 0.0011015268857292955 32 0.0 0.0 0.0 0.017963361521123895 0.0011015268857292955 33 0.0 0.0 0.0 0.02448778999813588 0.0011015268857292955 34 0.0 0.0 0.0 0.03321527224660645 0.0011015268857292955 35 0.0 0.0 0.0 0.04236641868189598 0.0011015268857292955 36 0.0 0.0 0.0 0.05372061888864411 0.0011015268857292955 37 0.0 0.0 0.0 0.06837939975258012 0.0011015268857292955 38 0.0 0.0 0.0 0.09024047179243844 0.0011862597230930874 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 605 0.0 29.830332 1 GTATCAA 1450 0.0 27.321474 1 TATCAAC 2135 0.0 18.856834 2 CCGTAAG 60 0.007394605 18.340803 1 CTAGGTA 120 3.1623495E-7 18.333033 4 ATCAACG 2200 0.0 18.099703 3 TCAACGC 2205 0.0 17.95889 4 CGCAATA 185 2.1827873E-11 17.837545 36 CAACGCA 2270 0.0 17.444649 5 AACGCAG 2335 0.0 16.959038 6 TCTAGCG 185 4.2200554E-10 16.648375 28 ATACGAA 185 4.2200554E-10 16.648375 40 CGTTCGC 80 0.0019885309 16.49973 15 GTTCGCG 80 0.0019885309 16.49973 16 AAACCGT 80 0.0019885309 16.49973 6 AGACCGT 175 3.6252459E-9 16.342588 6 GACCGTC 135 1.0855765E-6 16.29603 7 CTAGCGG 190 6.166374E-10 16.210262 29 GCGCAAT 195 8.913048E-10 15.794614 35 AATACGA 195 8.913048E-10 15.794614 39 >>END_MODULE