##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062149_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1434202 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.29520667242132 32.0 32.0 32.0 32.0 32.0 2 31.48992052723396 32.0 32.0 32.0 32.0 32.0 3 31.598191886498554 32.0 32.0 32.0 32.0 32.0 4 31.670463435415652 32.0 32.0 32.0 32.0 32.0 5 31.638784494792226 32.0 32.0 32.0 32.0 32.0 6 35.292133186259676 36.0 36.0 36.0 36.0 36.0 7 35.29496960679179 36.0 36.0 36.0 36.0 36.0 8 35.25267430947663 36.0 36.0 36.0 36.0 36.0 9 35.32626296714131 36.0 36.0 36.0 36.0 36.0 10 35.22272734245246 36.0 36.0 36.0 36.0 36.0 11 35.33536140655222 36.0 36.0 36.0 36.0 36.0 12 35.262804681627834 36.0 36.0 36.0 36.0 36.0 13 35.28995148521617 36.0 36.0 36.0 36.0 36.0 14 35.2588170982888 36.0 36.0 36.0 36.0 36.0 15 35.23821609508284 36.0 36.0 36.0 36.0 36.0 16 35.24597302193136 36.0 36.0 36.0 36.0 36.0 17 35.22404235944448 36.0 36.0 36.0 36.0 36.0 18 35.22638930917681 36.0 36.0 36.0 36.0 36.0 19 35.21493694751506 36.0 36.0 36.0 36.0 36.0 20 35.21436520099679 36.0 36.0 36.0 36.0 36.0 21 35.207466591177536 36.0 36.0 36.0 36.0 36.0 22 35.19160271705101 36.0 36.0 36.0 36.0 36.0 23 35.155982211710764 36.0 36.0 36.0 36.0 36.0 24 35.143759386753054 36.0 36.0 36.0 36.0 36.0 25 35.123212071939655 36.0 36.0 36.0 36.0 36.0 26 35.08727919776991 36.0 36.0 36.0 36.0 36.0 27 35.075438466826846 36.0 36.0 36.0 36.0 36.0 28 35.06401120623176 36.0 36.0 36.0 36.0 36.0 29 35.041797459493154 36.0 36.0 36.0 36.0 36.0 30 35.026269660759084 36.0 36.0 36.0 36.0 36.0 31 35.02387041713789 36.0 36.0 36.0 36.0 36.0 32 35.002477335828566 36.0 36.0 36.0 36.0 36.0 33 34.979268610697794 36.0 36.0 36.0 36.0 36.0 34 34.966342258621864 36.0 36.0 36.0 36.0 36.0 35 34.955202963041465 36.0 36.0 36.0 36.0 36.0 36 34.93224873483651 36.0 36.0 36.0 36.0 36.0 37 34.925117242898835 36.0 36.0 36.0 36.0 36.0 38 34.9081224262691 36.0 36.0 36.0 36.0 36.0 39 34.888763925862605 36.0 36.0 36.0 32.0 36.0 40 34.878636342718806 36.0 36.0 36.0 32.0 36.0 41 34.83835331424723 36.0 36.0 36.0 32.0 36.0 42 34.81980502049223 36.0 36.0 36.0 32.0 36.0 43 34.81168343092535 36.0 36.0 36.0 32.0 36.0 44 34.76271264438343 36.0 36.0 36.0 32.0 36.0 45 34.744086258421056 36.0 36.0 36.0 32.0 36.0 46 34.72145206881597 36.0 36.0 36.0 32.0 36.0 47 34.69662641664145 36.0 36.0 36.0 32.0 36.0 48 34.6719911142224 36.0 36.0 36.0 32.0 36.0 49 34.65433321108184 36.0 36.0 36.0 32.0 36.0 50 34.25886451141471 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 0.0 18 0.0 19 8.0 20 16.0 21 35.0 22 110.0 23 279.0 24 651.0 25 1629.0 26 3214.0 27 6196.0 28 10674.0 29 16849.0 30 25442.0 31 37994.0 32 57122.0 33 97132.0 34 224361.0 35 952489.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.653058947023354 17.994622474707846 12.537864125071055 24.814454453197747 2 16.248804148037408 19.825063941472283 37.18123397976744 26.744897930722868 3 18.72603186733194 23.386552465632313 28.413968523130727 29.47344714390502 4 12.643825625678948 15.63154980958052 34.623435192532156 37.101189372208374 5 14.620464899644542 36.84676217157695 32.343351912771006 16.189421016007508 6 34.65013993844661 34.84306952577113 16.35920184186049 14.147588693921776 7 31.421584965018873 30.47757568320223 19.21221696804216 18.888622383736738 8 29.1225364348955 32.33972620314293 18.280270143257365 20.2574672187042 9 27.282070447538075 14.528218479684174 18.5393689312942 39.650342141483556 10 17.261109147183692 26.682801085761344 29.58853047794556 26.467559289109406 11 37.14204833070934 21.75404859287604 20.896080189540946 20.207822886873675 12 25.02410749957642 24.183848707398752 27.64389370806463 23.148150084960196 13 29.80939923385967 19.672054564140893 25.017256983325918 25.501289218673524 14 24.0102858593141 19.53385924716323 24.634395991638556 31.821458901884114 15 25.71165010228685 27.089350035769023 21.923689968358712 25.275309893585423 16 25.714130325646778 26.536544618851593 23.09523411091402 24.654090944587615 17 24.145971069626178 26.380732979036424 24.589981048694675 24.883314902642724 18 24.95692717677254 25.12468632316715 25.826053427732138 24.092333072328177 19 26.103784543599858 24.8810139715326 25.212836127686337 23.802365357181205 20 26.55819226687603 23.961890790227823 24.72678033794591 24.75313660495024 21 27.46300730301589 23.465522987696293 24.76673439306318 24.304735316224633 22 26.96084651952793 23.905698081581257 24.7129762753085 24.42047912358231 23 25.129375081055528 24.13007372741078 25.39907209723595 25.341479094297735 24 24.905800355323013 24.83495887568436 24.747104284793906 25.51213648419872 25 25.373309161902107 24.493027471761263 24.953632687212384 25.18003067912425 26 24.746391186148067 24.978228235033264 25.617889313671693 24.657491265146977 27 25.55637366667643 25.087958566390416 24.949553687845054 24.406114079088105 28 24.904178494007365 24.744644489487698 25.566858205089048 24.784318811415883 29 24.88348872817941 24.925045112383522 25.45119356071276 24.740272598724303 30 25.012167180547014 24.83938624418311 25.263320099345556 24.88512647592432 31 25.180048738142304 24.489696310473818 24.501898277430893 25.828356673952985 32 25.280646609788953 24.632823590770528 24.752821805788365 25.333707993652155 33 24.87831169637086 24.25754620878443 25.523062731270528 25.34107936357418 34 25.499499715866502 24.20120137918051 25.705609806266278 24.59368909868671 35 25.905331129083205 24.430012850378503 25.342787158546336 24.321868861991955 36 24.95527116897388 24.513281987563783 24.85737673598764 25.6740701074747 37 25.61502300278767 24.279062373184843 24.82523041137268 25.28068421265481 38 25.056163636642538 24.073177976324118 25.551979428281374 25.318678958751974 39 25.85590064363812 23.95441053527738 25.358198454738595 24.831490366345903 40 25.454381917178974 24.839056729147448 25.065384837969017 24.64117651570456 41 24.98126110824072 25.340838651692287 24.99255673787794 24.68534350218905 42 25.94179311999085 24.76114372098407 24.783038589356863 24.514024569668216 43 25.558611985621994 24.284952253448942 24.789019164862445 25.367416596066615 44 24.872274925303405 25.177057947822206 24.645936400687525 25.304730726186865 45 25.111458195332492 24.994596177580064 24.955479475933814 24.93846615115363 46 25.299983335227587 24.525454916909723 24.949395570796344 25.225166177066345 47 25.251065936402906 24.528774181852413 24.869594926735395 25.35056495500929 48 25.826971832753664 25.210647715577473 24.122266321188608 24.840114130480256 49 25.266184060612566 25.279501979558738 24.369002578516454 25.08531138131224 50 25.07816313154555 25.678924542247138 24.61769094534856 24.625221380858747 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 237.0 1 192.0 2 147.0 3 289.0 4 431.0 5 441.5 6 452.0 7 328.0 8 204.0 9 318.0 10 432.0 11 719.0 12 1006.0 13 1937.0 14 2868.0 15 3322.0 16 3776.0 17 3519.5 18 3263.0 19 2824.5 20 2386.0 21 2830.5 22 3275.0 23 4103.0 24 4931.0 25 6370.0 26 7809.0 27 9718.5 28 11628.0 29 13736.5 30 15845.0 31 18179.0 32 20513.0 33 23426.0 34 26339.0 35 30276.0 36 34213.0 37 39854.5 38 45496.0 39 52621.0 40 59746.0 41 68557.5 42 77369.0 43 79339.5 44 81310.0 45 87224.5 46 93139.0 47 100709.0 48 108279.0 49 111446.0 50 114613.0 51 111816.0 52 109019.0 53 106786.5 54 104554.0 55 103068.5 56 101583.0 57 98278.0 58 94973.0 59 88400.0 60 81827.0 61 72657.0 62 63487.0 63 55117.0 64 46747.0 65 40191.5 66 33636.0 67 30560.0 68 27484.0 69 23327.0 70 19170.0 71 16275.0 72 13380.0 73 10993.5 74 8607.0 75 6434.0 76 4261.0 77 3264.5 78 2268.0 79 1912.5 80 1557.0 81 1214.0 82 871.0 83 719.5 84 568.0 85 428.5 86 289.0 87 200.0 88 111.0 89 74.5 90 38.0 91 28.0 92 18.0 93 17.5 94 17.0 95 13.0 96 9.0 97 10.5 98 12.0 99 10.5 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03186440961593974 2 0.005438564442107875 3 4.1835111093137505E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 6.972518515522918E-5 11 0.0 12 6.972518515522918E-5 13 0.0 14 0.0 15 0.0 16 6.972518515522918E-4 17 0.0 18 2.0917555546568753E-4 19 0.0 20 5.578014812418334E-4 21 0.0 22 0.0 23 0.0 24 9.761525921732085E-4 25 1.3945037031045835E-4 26 3.486259257761459E-4 27 2.789007406209167E-4 28 0.0017431296288807293 29 4.1835111093137505E-4 30 0.0011156029624836668 31 4.8807629608660423E-4 32 9.761525921732085E-4 33 3.486259257761459E-4 34 0.001185328147638896 35 2.0917555546568753E-4 36 2.789007406209167E-4 37 0.001952305184346417 38 0.0 39 7.66977036707521E-4 40 6.972518515522918E-5 41 0.0013247785179493544 42 0.005299114071797418 43 0.004671587405400354 44 0.004671587405400354 45 0.0022312059249673336 46 0.0027192822210539377 47 0.001185328147638896 48 0.0037651599983823756 49 0.003067908146830084 50 0.001533954073415042 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1434202.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.632586078521484 #Duplication Level Percentage of deduplicated Percentage of total 1 78.77177171199111 44.610491420369804 2 12.812565026265741 14.51217383473297 3 3.607636392340767 6.129293355877357 4 1.524402157171167 3.4532334553711985 5 0.8376535378073446 2.3719243041926252 6 0.5189569353920598 1.7633923988781923 7 0.3384347581368064 1.3416504900502402 8 0.2361988684596879 1.0701242199754117 9 0.17934594741372115 0.9141142324267395 >10 1.032401182816286 10.590569344059855 >50 0.07395196560363312 2.910332292437417 >100 0.05888764426624206 6.662811748370501 >500 0.005690763927462403 2.1833950818259074 >1k 0.002103108407975236 1.486493821431789 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACATGGGCAGAAATCACATTGCGTTAGCATCCGCA 1813 0.1264117606864305 No Hit GCGTTAGCATCCGCAAGGACCATCGCAATGCTTTGTTTTAATTAAACAGT 1787 0.12459890587239456 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1713 0.1194392421709076 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.972518515522918E-5 2 0.0 0.0 0.0 0.0 6.972518515522918E-5 3 0.0 0.0 0.0 0.0 6.972518515522918E-5 4 0.0 0.0 0.0 0.0 6.972518515522918E-5 5 0.0 0.0 0.0 0.0 6.972518515522918E-5 6 0.0 0.0 0.0 0.0 1.3945037031045835E-4 7 0.0 0.0 0.0 0.0 1.3945037031045835E-4 8 0.0 0.0 0.0 0.0 1.3945037031045835E-4 9 0.0 0.0 0.0 0.0 1.3945037031045835E-4 10 0.0 0.0 0.0 0.0 1.3945037031045835E-4 11 0.0 0.0 0.0 0.0 1.3945037031045835E-4 12 0.0 0.0 0.0 0.0 1.3945037031045835E-4 13 0.0 0.0 0.0 0.0 1.3945037031045835E-4 14 0.0 0.0 0.0 0.0 1.3945037031045835E-4 15 0.0 0.0 0.0 0.0 1.3945037031045835E-4 16 0.0 0.0 0.0 0.0 1.3945037031045835E-4 17 0.0 0.0 0.0 0.0 2.789007406209167E-4 18 0.0 0.0 0.0 0.0 2.789007406209167E-4 19 0.0 0.0 0.0 0.0 2.789007406209167E-4 20 0.0 6.972518515522918E-5 0.0 0.0 3.486259257761459E-4 21 0.0 6.972518515522918E-5 0.0 0.0 3.486259257761459E-4 22 0.0 6.972518515522918E-5 0.0 0.0 3.486259257761459E-4 23 0.0 6.972518515522918E-5 0.0 0.0 4.1835111093137505E-4 24 0.0 6.972518515522918E-5 0.0 6.972518515522918E-5 4.1835111093137505E-4 25 0.0 6.972518515522918E-5 0.0 6.972518515522918E-5 6.275266663970626E-4 26 0.0 6.972518515522918E-5 0.0 6.972518515522918E-5 6.275266663970626E-4 27 0.0 6.972518515522918E-5 0.0 6.972518515522918E-5 6.275266663970626E-4 28 0.0 6.972518515522918E-5 0.0 2.789007406209167E-4 6.275266663970626E-4 29 0.0 1.3945037031045835E-4 0.0 6.275266663970626E-4 6.275266663970626E-4 30 0.0 1.3945037031045835E-4 0.0 0.0011853281476388961 6.275266663970626E-4 31 0.0 1.3945037031045835E-4 0.0 0.0021614807398121047 6.972518515522918E-4 32 0.0 1.3945037031045835E-4 0.0 0.003486259257761459 6.972518515522918E-4 33 0.0 1.3945037031045835E-4 0.0 0.004950488146021272 6.972518515522918E-4 34 0.0 1.3945037031045835E-4 0.0 0.007460594811609522 7.66977036707521E-4 35 0.0 1.3945037031045835E-4 0.0 0.010110151847508232 7.66977036707521E-4 36 0.0 1.3945037031045835E-4 0.0 0.014851464438063816 7.66977036707521E-4 37 0.0 2.0917555546568753E-4 0.0 0.021893708138741964 7.66977036707521E-4 38 0.0 2.0917555546568753E-4 0.0 0.030260730357369463 7.66977036707521E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1375 0.0 33.12908 1 GTATCAA 3205 0.0 26.503366 1 CGTCGTA 340 0.0 21.998362 10 ACCGTCG 325 0.0 20.983053 8 TACCGTC 365 0.0 20.491625 7 CGCAATA 235 0.0 19.66085 36 ATACCGT 395 0.0 18.935299 6 GTATTAG 205 0.0 18.248905 1 GTCTAAT 85 1.4280656E-4 18.122616 1 CTAGCGG 255 0.0 18.118824 29 GTCGTAG 400 0.0 17.598688 11 TATCAAC 4865 0.0 17.590258 2 ATCAACG 4910 0.0 17.428436 3 TCAACGC 4985 0.0 17.166224 4 CAACGCA 5085 0.0 16.871899 5 CCGTCGT 425 0.0 16.563473 9 GTATAAT 120 6.3915268E-6 16.504524 1 TAGGGCG 80 0.00198773 16.501074 31 AACGCAG 5215 0.0 16.409134 6 CGCGCAT 190 6.166374E-10 16.21158 40 >>END_MODULE