##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062148_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1249736 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.296545830479396 32.0 32.0 32.0 32.0 32.0 2 31.470106486489946 32.0 32.0 32.0 32.0 32.0 3 31.58197251259466 32.0 32.0 32.0 32.0 32.0 4 31.65487590979215 32.0 32.0 32.0 32.0 32.0 5 31.63350099541023 32.0 32.0 32.0 32.0 32.0 6 35.275390162402296 36.0 36.0 36.0 36.0 36.0 7 35.277796270572345 36.0 36.0 36.0 36.0 36.0 8 35.22818979368443 36.0 36.0 36.0 36.0 36.0 9 35.31407113182304 36.0 36.0 36.0 36.0 36.0 10 35.200487943053574 36.0 36.0 36.0 36.0 36.0 11 35.31838084203384 36.0 36.0 36.0 36.0 36.0 12 35.24017952591587 36.0 36.0 36.0 36.0 36.0 13 35.27429233054021 36.0 36.0 36.0 36.0 36.0 14 35.22839143627134 36.0 36.0 36.0 36.0 36.0 15 35.21195116408585 36.0 36.0 36.0 36.0 36.0 16 35.2270239474577 36.0 36.0 36.0 36.0 36.0 17 35.20459681084645 36.0 36.0 36.0 36.0 36.0 18 35.20263079562404 36.0 36.0 36.0 36.0 36.0 19 35.193167196911986 36.0 36.0 36.0 36.0 36.0 20 35.19806263082763 36.0 36.0 36.0 36.0 36.0 21 35.18970646600562 36.0 36.0 36.0 36.0 36.0 22 35.16901009493205 36.0 36.0 36.0 36.0 36.0 23 35.14380077072278 36.0 36.0 36.0 36.0 36.0 24 35.13120050954762 36.0 36.0 36.0 36.0 36.0 25 35.11415450943239 36.0 36.0 36.0 36.0 36.0 26 35.073481119212374 36.0 36.0 36.0 36.0 36.0 27 35.05635990321156 36.0 36.0 36.0 36.0 36.0 28 35.04468623773341 36.0 36.0 36.0 36.0 36.0 29 35.027497007367955 36.0 36.0 36.0 36.0 36.0 30 35.01044380573177 36.0 36.0 36.0 36.0 36.0 31 35.00343432532951 36.0 36.0 36.0 36.0 36.0 32 34.98401342363507 36.0 36.0 36.0 36.0 36.0 33 34.95894572933803 36.0 36.0 36.0 36.0 36.0 34 34.95182582561437 36.0 36.0 36.0 36.0 36.0 35 34.941287599941106 36.0 36.0 36.0 36.0 36.0 36 34.92006951868235 36.0 36.0 36.0 36.0 36.0 37 34.91183657988567 36.0 36.0 36.0 36.0 36.0 38 34.899568388843726 36.0 36.0 36.0 32.0 36.0 39 34.88798754296908 36.0 36.0 36.0 32.0 36.0 40 34.8702645998835 36.0 36.0 36.0 32.0 36.0 41 34.850004320912575 36.0 36.0 36.0 32.0 36.0 42 34.81941145970029 36.0 36.0 36.0 32.0 36.0 43 34.81432238488769 36.0 36.0 36.0 32.0 36.0 44 34.77437314760878 36.0 36.0 36.0 32.0 36.0 45 34.7649887656273 36.0 36.0 36.0 32.0 36.0 46 34.740753247085784 36.0 36.0 36.0 32.0 36.0 47 34.72243497826741 36.0 36.0 36.0 32.0 36.0 48 34.694431463925184 36.0 36.0 36.0 32.0 36.0 49 34.67382311144114 36.0 36.0 36.0 32.0 36.0 50 34.263434037268674 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 9.0 21 31.0 22 78.0 23 205.0 24 602.0 25 1310.0 26 2925.0 27 5474.0 28 9413.0 29 14854.0 30 22728.0 31 33359.0 32 50380.0 33 86299.0 34 197248.0 35 824819.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.21345247833667 17.427197909946486 12.111616797908665 26.247732813808184 2 16.49296942267005 19.0674602539522 36.9559024521399 27.48366787123785 3 19.245680084177845 22.118929212993155 27.822138293318183 30.813252409510817 4 13.126372289827613 15.165362924649687 33.849549024754026 37.858715760768675 5 15.08007697631898 36.08581019176065 32.74110111343605 16.09301171848432 6 36.5263620309298 33.69447714031717 15.583008530622141 14.196152298130881 7 31.81687972499792 29.47254460141982 19.117157543673223 19.593418129909036 8 28.7199856609716 33.23165852628075 18.038929821978403 20.00942599076925 9 26.886638458042338 14.617007111902034 18.17159784146412 40.32475658859151 10 16.9053304057817 26.662911206846886 30.155568856142416 26.276189531228994 11 37.632267934987865 21.29009646837412 21.030201578573397 20.047434018064617 12 24.774512377014023 23.165852628075047 27.807392921385 24.252242073525927 13 29.89407362835031 19.06938745463042 24.565348201540164 26.47119071547911 14 23.726771094055067 18.84614030483238 24.546384196342267 32.88070440477029 15 25.380400340551923 26.730365453183712 21.59320048394221 26.296033722322154 16 26.28575772366831 25.69571027341906 22.79292327142663 25.225608731486 17 24.6943354436457 25.94083870513452 24.264164591561737 25.10066125965804 18 25.189320590334567 24.92542401090794 25.140670159682237 24.74458523907526 19 26.080409046717907 24.731643108338968 24.769571149083607 24.41837669585952 20 26.19551918856008 24.03553090309979 24.696474195605607 25.072475712734523 21 26.670352778506825 23.933694796340987 24.451884237951056 24.944068187201136 22 26.341723371976162 23.720049674491253 24.7621097575808 25.176117195951786 23 25.12124570408927 24.025893489419754 25.096680496265204 25.75618031022577 24 25.065334739517237 24.379339979099285 24.964832066114116 25.590493215269365 25 25.410327974317692 24.022910512013777 24.971113806800176 25.595647706868352 26 25.05025093460337 24.759547677574638 25.099301608029904 25.090899779792082 27 25.455217598653153 24.45772373596899 24.78099304490883 25.306065620469028 28 25.480110617486268 24.180371157514692 25.063374601508187 25.276143623490853 29 24.94186744336777 24.653325118225535 25.136069390988453 25.268738047418243 30 25.231792477816978 24.649340610714265 25.063114289075045 25.05575262239371 31 25.413949081842414 24.249378466245936 24.62369902002911 25.712973431882542 32 25.460741731774377 24.421472261075245 24.495168533212134 25.62261747393825 33 25.162954676755213 24.369025728675062 24.828003399123332 25.640016195446393 34 25.6188956619291 24.342295831246208 24.830562859378777 25.20824564744592 35 25.692168954759065 24.224413093697763 25.163975287481865 24.919442664061307 36 25.05245116160719 24.73910448143365 24.806158750582124 25.40228560637704 37 25.796524156384955 24.20727672237821 24.73675913871287 25.259439982523958 38 25.171156148178497 24.425558677992793 24.889256610996245 25.51402856283247 39 25.725783156053485 24.257533093439402 24.48678462918464 25.529899121322476 40 25.77064275975086 24.44484275078897 24.730183014652695 25.05433147480748 41 25.071256075370602 24.730139119385335 25.02756621893899 25.171038586305073 42 25.875331787857426 24.557862922101773 24.652207904653153 24.91459738538765 43 25.64526880231869 24.111187486646507 24.71574563905918 25.527798071975628 44 25.109628415685346 24.523236422880814 24.664232969185612 25.702902192248228 45 25.26860253066914 24.59172495356919 24.790331189100822 25.349341326660845 46 25.406315890550168 24.511864800092823 24.602926290604582 25.478893018752423 47 25.274282097466866 24.57636408882971 24.937005738099106 25.212348075604318 48 25.696736134894905 24.85404310209621 24.26349381123548 25.185726951773407 49 25.30733646531257 24.671898368314036 24.4416010703463 25.57916409602709 50 25.217849146767513 25.02692607452241 24.604510777631432 25.150714001078644 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 43.0 1 37.5 2 32.0 3 119.5 4 207.0 5 223.0 6 239.0 7 179.5 8 120.0 9 177.0 10 234.0 11 396.5 12 559.0 13 1113.5 14 1668.0 15 2047.5 16 2427.0 17 2315.0 18 2203.0 19 2028.5 20 1854.0 21 2155.0 22 2456.0 23 3050.0 24 3644.0 25 4573.5 26 5503.0 27 6886.0 28 8269.0 29 9762.5 30 11256.0 31 13252.5 32 15249.0 33 18009.5 34 20770.0 35 24192.0 36 27614.0 37 32147.5 38 36681.0 39 42110.5 40 47540.0 41 53078.0 42 58616.0 43 62391.5 44 66167.0 45 73349.5 46 80532.0 47 85366.0 48 90200.0 49 95045.0 50 99890.0 51 101380.0 52 102870.0 53 103186.5 54 103503.0 55 102401.5 56 101300.0 57 96807.5 58 92315.0 59 86000.0 60 79685.0 61 69319.0 62 58953.0 63 50969.5 64 42986.0 65 36091.0 66 29196.0 67 24595.0 68 19994.0 69 16906.5 70 13819.0 71 10779.5 72 7740.0 73 6622.0 74 5504.0 75 4189.0 76 2874.0 77 2465.0 78 2056.0 79 1693.5 80 1331.0 81 1038.5 82 746.0 83 603.0 84 460.0 85 351.5 86 243.0 87 174.5 88 106.0 89 70.0 90 34.0 91 24.0 92 14.0 93 13.0 94 12.0 95 10.0 96 8.0 97 9.0 98 10.0 99 7.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.031206590831983714 2 0.004160878777597829 3 8.001689956918901E-5 4 0.0 5 8.001689956918901E-5 6 2.4005069870756702E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 4.8010139741513403E-4 17 0.0 18 3.2006759827675604E-4 19 8.001689956918901E-5 20 5.601182969843231E-4 21 0.0 22 0.0 23 8.001689956918901E-5 24 0.0014403041922454022 25 3.2006759827675604E-4 26 6.401351965535121E-4 27 3.2006759827675604E-4 28 0.0019204055896605361 29 4.8010139741513403E-4 30 0.0015203210918145913 31 4.00084497845945E-4 32 9.602027948302681E-4 33 1.6003379913837802E-4 34 8.0016899569189E-4 35 4.00084497845945E-4 36 1.6003379913837802E-4 37 0.0020004224892297253 38 0.0 39 0.0013602872926762133 40 0.0 41 0.0014403041922454022 42 0.005361132271135664 43 0.005041064672858908 44 0.004801013974151341 45 0.002160456288368103 46 0.002480523886644859 47 0.0015203210918145913 48 0.004160878777597829 49 0.0037607942797518836 50 0.0014403041922454022 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1249736.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.75737708143607 #Duplication Level Percentage of deduplicated Percentage of total 1 76.68423691610016 42.75711913933177 2 13.217733860708297 14.739723420671567 3 4.103125732329863 6.86338586010179 4 1.8058806138752463 4.027646654075894 5 0.9950461419873418 2.7740581476108193 6 0.6454526273795302 2.1593247319802464 7 0.4629818865374394 1.8070258940679855 8 0.3364388442357983 1.500715800231835 9 0.25697101337387573 1.2895226722517343 >10 1.3715560246176606 13.65406732402517 >50 0.0765770680914343 2.891602949318086 >100 0.040825561384803935 4.282705509585702 >500 0.002885190344058774 1.0779137632911848 >1k 2.8851903440587734E-4 0.1751881334563242 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 8.001689956918901E-5 7 0.0 0.0 0.0 0.0 8.001689956918901E-5 8 0.0 0.0 0.0 0.0 8.001689956918901E-5 9 0.0 0.0 0.0 0.0 8.001689956918901E-5 10 0.0 0.0 0.0 0.0 8.001689956918901E-5 11 0.0 0.0 0.0 0.0 8.001689956918901E-5 12 0.0 0.0 0.0 0.0 2.4005069870756704E-4 13 0.0 0.0 0.0 0.0 4.0008449784594507E-4 14 0.0 0.0 0.0 1.6003379913837802E-4 4.0008449784594507E-4 15 0.0 0.0 0.0 1.6003379913837802E-4 5.601182969843231E-4 16 0.0 0.0 0.0 1.6003379913837802E-4 5.601182969843231E-4 17 0.0 0.0 0.0 1.6003379913837802E-4 5.601182969843231E-4 18 0.0 0.0 0.0 4.0008449784594507E-4 7.201520961227011E-4 19 0.0 0.0 0.0 4.801013974151341E-4 7.201520961227011E-4 20 0.0 0.0 0.0 5.601182969843231E-4 8.801858952610792E-4 21 0.0 0.0 0.0 7.201520961227011E-4 8.801858952610792E-4 22 0.0 0.0 0.0 8.801858952610792E-4 8.801858952610792E-4 23 0.0 0.0 0.0 0.0010402196943994572 8.801858952610792E-4 24 0.0 0.0 0.0 0.0016003379913837803 8.801858952610792E-4 25 0.0 0.0 0.0 0.0018403886900913472 8.801858952610792E-4 26 0.0 0.0 0.0 0.0022404731879372922 0.0011202365939686461 27 0.0 0.0 0.0 0.0028806083844908044 0.0011202365939686461 28 0.0 0.0 0.0 0.004320912576736207 0.0011202365939686461 29 0.0 0.0 0.0 0.005921250568119987 0.0011202365939686461 30 0.0 0.0 0.0 0.008401774454764846 0.0011202365939686461 31 0.0 0.0 0.0 0.013122771529346999 0.0011202365939686461 32 0.0 0.0 0.0 0.01944410659531293 0.0012002534935378352 33 0.0 0.0 0.0 0.02592547546041724 0.0012002534935378352 34 0.0 0.0 0.0 0.03232682742595236 0.0013602872926762133 35 0.0 0.0 0.0 0.03936831458804099 0.0013602872926762133 36 0.0 0.0 0.0 0.04873029183763611 0.0013602872926762133 37 0.0 0.0 0.0 0.06273324926224419 0.0013602872926762133 38 0.0 0.0 0.0 0.08177727135971118 0.0013602872926762133 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 565 0.0 33.49818 1 GTATCAA 1415 0.0 25.195894 1 TATAACG 45 0.0013987138 24.443024 2 ATACCGT 290 0.0 20.481567 6 ACCGTCG 270 0.0 20.369184 8 CGTCGTA 270 0.0 19.5552 10 TACCGTC 290 0.0 18.205837 7 TCTATAC 100 2.4843652E-5 17.598974 3 CCGTCGT 295 0.0 17.151545 9 GGCGTTA 260 0.0 16.926155 42 CGGCGTT 280 0.0 16.50168 41 TACCGTT 80 0.001989175 16.499039 7 TATCAAC 2190 0.0 16.273026 2 TAGAGTA 95 3.347912E-4 16.209581 4 CGAGCCG 235 3.6379788E-12 15.914605 15 TCAACGC 2225 0.0 15.8193035 4 GTCGTAG 335 0.0 15.760908 11 ATCAACG 2245 0.0 15.678375 3 GTGTTAG 225 2.5465852E-11 15.649795 1 TAGGACG 85 0.002981171 15.528509 4 >>END_MODULE