##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062146_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 52162 Sequences flagged as poor quality 0 Sequence length 50 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.937809133085388 32.0 32.0 32.0 32.0 32.0 2 31.360914075380546 32.0 32.0 32.0 32.0 32.0 3 31.55586442237644 32.0 32.0 32.0 32.0 32.0 4 31.698995437291515 32.0 32.0 32.0 32.0 32.0 5 31.69999233158238 32.0 32.0 32.0 32.0 32.0 6 35.315977148115486 36.0 36.0 36.0 36.0 36.0 7 35.32510256508569 36.0 36.0 36.0 36.0 36.0 8 35.283693109926766 36.0 36.0 36.0 36.0 36.0 9 35.31722326597907 36.0 36.0 36.0 36.0 36.0 10 35.2626049614662 36.0 36.0 36.0 36.0 36.0 11 35.30633411295579 36.0 36.0 36.0 36.0 36.0 12 35.29193665887044 36.0 36.0 36.0 36.0 36.0 13 35.27752003374104 36.0 36.0 36.0 36.0 36.0 14 35.26933399792953 36.0 36.0 36.0 36.0 36.0 15 35.277654231049425 36.0 36.0 36.0 36.0 36.0 16 35.27220965453779 36.0 36.0 36.0 36.0 36.0 17 35.248629270350065 36.0 36.0 36.0 36.0 36.0 18 35.277654231049425 36.0 36.0 36.0 36.0 36.0 19 35.16335646639316 36.0 36.0 36.0 36.0 36.0 20 35.08778421072812 36.0 36.0 36.0 36.0 36.0 21 35.045032782485336 36.0 36.0 36.0 36.0 36.0 22 35.05482918599747 36.0 36.0 36.0 36.0 36.0 23 35.06249760361949 36.0 36.0 36.0 36.0 36.0 24 35.03441202407883 36.0 36.0 36.0 36.0 36.0 25 35.019190215099115 36.0 36.0 36.0 36.0 36.0 26 34.99275334534719 36.0 36.0 36.0 36.0 36.0 27 34.991794793144436 36.0 36.0 36.0 36.0 36.0 28 34.889670641463134 36.0 36.0 36.0 36.0 36.0 29 34.80395690349297 36.0 36.0 36.0 32.0 36.0 30 34.73720332809325 36.0 36.0 36.0 32.0 36.0 31 34.7239561366512 36.0 36.0 36.0 32.0 36.0 32 34.65754764004448 36.0 36.0 36.0 32.0 36.0 33 34.64767455235612 36.0 36.0 36.0 32.0 36.0 34 34.60657183390207 36.0 36.0 36.0 32.0 36.0 35 34.56957171887581 36.0 36.0 36.0 32.0 36.0 36 34.461485372493385 36.0 36.0 36.0 32.0 36.0 37 34.35888194471071 36.0 36.0 36.0 32.0 36.0 38 34.29446723668571 36.0 36.0 36.0 32.0 36.0 39 34.09184847206779 36.0 36.0 36.0 32.0 36.0 40 34.1258003910893 36.0 36.0 36.0 32.0 36.0 41 34.12547448334036 36.0 36.0 36.0 32.0 36.0 42 34.05536597523101 36.0 36.0 36.0 32.0 36.0 43 34.07699091292512 36.0 36.0 36.0 32.0 36.0 44 33.852191250335494 36.0 36.0 36.0 32.0 36.0 45 33.80376519305241 36.0 36.0 36.0 32.0 36.0 46 33.511061692419766 36.0 36.0 36.0 21.0 36.0 47 33.45195736359802 36.0 36.0 36.0 21.0 36.0 48 33.35313063149419 36.0 36.0 36.0 21.0 36.0 49 33.22627583298186 36.0 36.0 36.0 14.0 36.0 50 32.9363521337372 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 3.0 21 3.0 22 10.0 23 15.0 24 45.0 25 93.0 26 226.0 27 407.0 28 746.0 29 1057.0 30 1446.0 31 1983.0 32 2882.0 33 4377.0 34 8649.0 35 30220.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.87535953978907 22.0 13.119846596356663 23.004793863854267 2 12.020705521472392 22.268021472392636 45.8646472392638 19.846625766871163 3 19.656071469652236 27.040757639661056 30.907557225566507 22.395613665120205 4 10.120394156665773 18.124305049653003 40.01380315171964 31.74149764196158 5 10.369617729381542 40.901422491468885 35.64663931597715 13.082320463172426 6 28.11625321114988 40.817069897626624 18.312181281392583 12.754495609830913 7 25.271270273379088 32.96652735707987 21.672865304244468 20.089337065296576 8 23.317740884168554 41.165982899428705 19.888041102718454 15.62823511368429 9 25.648939841263758 14.178904183121812 21.962348069475865 38.20980790613857 10 16.0845059621947 29.582838081361913 33.001035236378975 21.331620720064414 11 33.52248763467659 22.911314750201296 26.07453701928607 17.491660595836052 12 23.432767148498908 26.304589547946783 33.73336911928224 16.529274184272076 13 29.895326099459375 22.949656838311412 27.94179671024884 19.21322035198037 14 19.201717725547333 25.47640044476822 28.681799010774128 26.640082818910315 15 21.73421264522066 34.617154250220466 25.173497948698287 18.47513515586059 16 18.678348222844214 29.01345807292665 32.619531459683294 19.68866224454584 17 16.379740040642613 30.77911123039761 31.538284574977954 21.302864153981826 18 17.046892373758674 28.409570185192283 37.030788696752424 17.512748744296612 19 22.917066063417813 24.928108584793527 30.123461523714585 22.031363828074078 20 22.22882558184119 28.192937387370115 31.90253441202408 17.675702618764618 21 21.603849545646256 25.71412139105096 29.71511828534182 22.966910777960965 22 20.63762892527127 29.989264215329165 31.189371573175872 18.183735286223687 23 20.55327633142901 29.162992216556116 31.40408726659254 18.879644185422336 24 21.79022641437089 27.861812465251816 32.476371235214046 17.871589885163246 25 20.860013036309958 28.720141098884245 32.95694183505234 17.46290402975346 26 16.604041256086806 30.529887657681837 34.80694758636555 18.059123499865805 27 17.104405505923854 29.747709060235422 34.34109121582761 18.806794218013113 28 16.868601664046622 30.66216786166175 31.66673057014685 20.80249990414478 29 18.296844446148537 27.136612859936353 30.775277021586593 23.791265672328514 30 18.207089588006365 28.76670309234869 31.97791453384713 21.048292785797816 31 21.473486446071853 27.362831179786053 31.538284574977954 19.625397799164144 32 18.034201142594224 30.203979908745833 32.42590391472719 19.33591503393275 33 18.741612668225912 30.169472029446727 33.60492312411334 17.483992178214024 34 18.548340714326798 30.024347692720614 33.94298422192826 17.484327371024328 35 18.235497105172346 30.988075610597754 32.533261761435526 18.24316552279437 36 17.683371036386642 30.42444691537901 32.98953260994594 18.90264943828841 37 17.796821379958207 29.732942236536875 30.716435651156992 21.753800732347923 38 19.583221502243013 32.41440128829416 30.014186572600742 17.988190636862083 39 20.23311989570952 27.667650780261493 31.147195276254745 20.952034047774244 40 22.230742686246693 28.768068709021893 31.411755684214565 17.589432920516852 41 21.180169472029448 27.303400943215365 33.811970399907985 17.704459184847206 42 19.127684049079754 32.354294478527606 31.39187116564417 17.126150306748468 43 17.279855825456778 32.2763089783163 32.801625798040604 17.642209398186314 44 16.810138231177746 31.749074943921467 31.672386357100407 19.76840046780038 45 17.557851952683144 31.97338906037309 30.964934143676064 19.5038248432677 46 19.225091543490347 28.782040221621518 29.51055386208086 22.48231437280727 47 21.56208661643757 30.706849945361476 28.47913191848316 19.251931519717797 48 19.17022949059606 30.761709388600238 28.15046300734293 21.917598113460766 49 20.516114189305775 29.977568588354835 29.191510573438904 20.314806648900475 50 18.949023216579437 32.35175705987231 27.420869998658 21.278349724890244 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 295.0 1 157.0 2 19.0 3 61.5 4 104.0 5 87.5 6 71.0 7 46.5 8 22.0 9 47.0 10 72.0 11 115.5 12 159.0 13 277.5 14 396.0 15 506.5 16 617.0 17 662.0 18 707.0 19 698.0 20 689.0 21 695.5 22 702.0 23 634.0 24 566.0 25 673.0 26 780.0 27 1147.0 28 1514.0 29 1956.0 30 2398.0 31 2631.5 32 2865.0 33 3325.0 34 3785.0 35 4277.0 36 4769.0 37 5026.5 38 5284.0 39 4869.0 40 4454.0 41 3964.0 42 3474.0 43 2899.5 44 2325.0 45 2265.0 46 2205.0 47 2097.5 48 1990.0 49 1947.0 50 1904.0 51 1957.0 52 2010.0 53 1870.5 54 1731.0 55 1615.0 56 1499.0 57 1391.0 58 1283.0 59 1167.5 60 1052.0 61 895.0 62 738.0 63 631.0 64 524.0 65 475.0 66 426.0 67 343.5 68 261.0 69 213.0 70 165.0 71 135.5 72 106.0 73 93.0 74 80.0 75 63.0 76 46.0 77 39.5 78 33.0 79 26.5 80 20.0 81 15.5 82 11.0 83 8.5 84 6.0 85 5.0 86 4.0 87 2.0 88 0.0 89 0.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.023005252866071087 2 0.003834208811011848 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.001917104405505924 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.001917104405505924 31 0.0 32 0.0 33 0.0 34 0.001917104405505924 35 0.0 36 0.0 37 0.001917104405505924 38 0.0 39 0.0 40 0.0 41 0.0 42 0.003834208811011848 43 0.005751313216517772 44 0.005751313216517772 45 0.005751313216517772 46 0.001917104405505924 47 0.001917104405505924 48 0.005751313216517772 49 0.005751313216517772 50 0.001917104405505924 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 52162.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.47459836662704 #Duplication Level Percentage of deduplicated Percentage of total 1 79.71646004664294 49.80253824623289 2 11.88167423591506 14.846056516237875 3 3.5534552596047626 6.660020704727579 4 1.4637289799926354 3.657835205705303 5 0.9727507057812692 3.0386104827268894 6 0.47563520314226093 1.7829070971205092 7 0.3682337056585246 1.6103677006249761 8 0.2301460660365779 1.1502626433035543 9 0.20252853811218852 1.1387600168705188 >10 1.049466061126795 11.558222460795214 >50 0.061372284276420774 2.5075725624017484 >100 0.024548913710568308 2.246846363252943 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 202 0.38725508991219665 No Hit GATATACACTGTTCTACAAATCCCGTTTCCAACGAATGTGTTTTTCAGTG 187 0.35849852382960773 No Hit GTGTATATCAATGAGTTACAATGAGAAACATGGAAAATGATAAAAACCAC 150 0.2875656608258886 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 143 0.2741459299873471 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 136 0.2607261991488057 No Hit TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 135 0.2588090947432997 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 118 0.226218319849699 No Hit CCATAGGGTCTTCTCGTCTTATTATTATATTTCAGCCTCTTCACTGAAAG 101 0.19362754495609832 No Hit GTTCTACAGTGTGGTTTTTATCATTTTCCATGTTTCTCATTGTAACTCAT 94 0.18020781411755685 No Hit CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 82 0.15720256125148574 No Hit GTTCTACAAATCCCGTTTCCAACGAATGTGTTTTTCAGTGTAACTCACTC 80 0.15336835244047392 No Hit TATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 78 0.14953414362946205 No Hit CTGTAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 76 0.1456999348184502 No Hit TTGTAGAACAGTGTATATCAATGAGTTACAATGAGAAACATGGAAAATGA 75 0.1437828304129443 No Hit GTCCTACAGTGTGCATTTCTCATTTTTCACGTTTTTCAGTGATTTCGTCA 73 0.13994862160193244 No Hit CTGTAGAACAGATTAGATGAGTGAGTTACACTGAAAAACACATTCGTTGG 72 0.1380315171964265 No Hit GTATTAGAGGCACTGCCTGCCCAGTGACTAAAGTTTAACGGCCGCGGTAT 68 0.13036309957440284 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 62 0.11886047314136727 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 61 0.11694336873586135 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 58 0.1111920555193436 No Hit ATACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 57 0.10927495111383767 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 55 0.10544074230282581 No Hit GTTCATGCTAGTCCCTAATTAAGGAACAAGTGATTATGCTACCTTTGCAC 54 0.10352363789731989 No Hit GTATATCAATGAGTTACAATGAGAAACATGGAAAATGATAAAAACCACAC 53 0.10160653349181396 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG 53 0.10160653349181396 No Hit ACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAA 53 0.10160653349181396 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 53 0.10160653349181396 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0019171044055059237 0.0 21 0.0 0.0 0.0 0.0019171044055059237 0.0 22 0.0 0.0 0.0 0.0038342088110118475 0.0 23 0.0 0.0 0.0 0.00958552202752962 0.0 24 0.0 0.0 0.0 0.011502626433035543 0.0 25 0.0 0.0 0.0 0.01533683524404739 0.0 26 0.0 0.0 0.0 0.023005252866071087 0.0 27 0.0 0.0 0.0 0.02492235727157701 0.0 28 0.0 0.0 0.0 0.026839461677082933 0.0 29 0.0 0.0 0.0 0.03642498370461255 0.0 30 0.0 0.0 0.0 0.05367892335416587 0.0 31 0.0 0.0 0.0 0.07668417622023696 0.0 32 0.0 0.0 0.0 0.11886047314136727 0.0 33 0.0 0.0 0.0 0.1437828304129443 0.0 34 0.0 0.0 0.0 0.16295387446800352 0.0 35 0.0 0.0 0.0 0.19937885817261608 0.0 36 0.0 0.0 0.0 0.23580384187722864 0.0 37 0.0 0.0 0.0 0.2703117211763353 0.0 38 0.0 0.0 0.0 0.32782485334151296 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCACTG 20 7.787468E-4 44.0 12 ATTTAGA 20 7.787468E-4 44.0 1 GGACATG 55 7.4578566E-11 40.0 6 GACATGG 40 4.0246232E-7 38.5 7 GTCCACT 40 4.0246232E-7 38.5 11 TAGGACA 55 3.2923708E-9 36.0 4 CTACACC 25 0.0023322748 35.2 4 CCGTGCA 25 0.0023322748 35.2 10 TGACCGT 25 0.0023322748 35.2 7 ACCGTGC 25 0.0023322748 35.2 9 CCACTGT 25 0.0023322748 35.2 13 GACCGTG 25 0.0023322748 35.2 8 TTTAGAA 25 0.0023322748 35.2 2 AGCATAA 25 0.0023322748 35.2 22 TCACTTG 25 0.0023322748 35.2 29 TCCTGAC 25 0.0023322748 35.2 4 GTAGCAT 25 0.0023322748 35.2 20 GCATAAT 25 0.0023322748 35.2 23 CATAATC 25 0.0023322748 35.2 24 TAGGACC 70 2.5465852E-11 34.57143 4 >>END_MODULE