##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062145_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2671900 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.275523784572776 32.0 32.0 32.0 32.0 32.0 2 31.42798944571279 32.0 32.0 32.0 32.0 32.0 3 31.565541749316967 32.0 32.0 32.0 32.0 32.0 4 31.641581646019688 32.0 32.0 32.0 32.0 32.0 5 31.61445675362102 32.0 32.0 32.0 32.0 32.0 6 35.24678543358659 36.0 36.0 36.0 36.0 36.0 7 35.255416744638644 36.0 36.0 36.0 36.0 36.0 8 35.202199184101204 36.0 36.0 36.0 36.0 36.0 9 35.29129608144017 36.0 36.0 36.0 36.0 36.0 10 35.169182229873876 36.0 36.0 36.0 36.0 36.0 11 35.29889479396684 36.0 36.0 36.0 36.0 36.0 12 35.219148171713016 36.0 36.0 36.0 36.0 36.0 13 35.25845091507916 36.0 36.0 36.0 36.0 36.0 14 35.215598637673565 36.0 36.0 36.0 36.0 36.0 15 35.191016130843224 36.0 36.0 36.0 36.0 36.0 16 35.210909465174595 36.0 36.0 36.0 36.0 36.0 17 35.194195890564764 36.0 36.0 36.0 36.0 36.0 18 35.18687787716606 36.0 36.0 36.0 36.0 36.0 19 35.17606310116397 36.0 36.0 36.0 36.0 36.0 20 35.178484598974514 36.0 36.0 36.0 36.0 36.0 21 35.167397357685545 36.0 36.0 36.0 36.0 36.0 22 35.15689995883079 36.0 36.0 36.0 36.0 36.0 23 35.12013361278491 36.0 36.0 36.0 36.0 36.0 24 35.10959841311426 36.0 36.0 36.0 36.0 36.0 25 35.09421722369849 36.0 36.0 36.0 36.0 36.0 26 35.04798907144728 36.0 36.0 36.0 36.0 36.0 27 35.039043751637415 36.0 36.0 36.0 36.0 36.0 28 35.01771136644336 36.0 36.0 36.0 36.0 36.0 29 34.99542310715221 36.0 36.0 36.0 36.0 36.0 30 34.97872600022456 36.0 36.0 36.0 36.0 36.0 31 34.97799356263333 36.0 36.0 36.0 36.0 36.0 32 34.95524383397582 36.0 36.0 36.0 36.0 36.0 33 34.93079119727535 36.0 36.0 36.0 36.0 36.0 34 34.92196826228526 36.0 36.0 36.0 36.0 36.0 35 34.913617276095664 36.0 36.0 36.0 36.0 36.0 36 34.886227029454695 36.0 36.0 36.0 32.0 36.0 37 34.87589730154571 36.0 36.0 36.0 32.0 36.0 38 34.85965006175381 36.0 36.0 36.0 32.0 36.0 39 34.84603727684419 36.0 36.0 36.0 32.0 36.0 40 34.83745574310416 36.0 36.0 36.0 32.0 36.0 41 34.806621131030354 36.0 36.0 36.0 32.0 36.0 42 34.78317040308395 36.0 36.0 36.0 32.0 36.0 43 34.78087278715521 36.0 36.0 36.0 32.0 36.0 44 34.7428058684831 36.0 36.0 36.0 32.0 36.0 45 34.720764250159064 36.0 36.0 36.0 32.0 36.0 46 34.70579961824919 36.0 36.0 36.0 32.0 36.0 47 34.67765784647629 36.0 36.0 36.0 32.0 36.0 48 34.65591713761743 36.0 36.0 36.0 32.0 36.0 49 34.641237696021555 36.0 36.0 36.0 32.0 36.0 50 34.22593135970658 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 7.0 20 19.0 21 46.0 22 159.0 23 424.0 24 1189.0 25 2832.0 26 6179.0 27 11586.0 28 20059.0 29 32897.0 30 49118.0 31 73695.0 32 112395.0 33 191741.0 34 442975.0 35 1726578.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.278728780277056 17.66311337040502 11.799332170490832 26.25882567882709 2 15.999851782872387 19.73840425547842 37.78230497096292 26.479438990686276 3 18.50973018370503 23.33900472025067 28.585249703206568 29.566015392837734 4 12.378279410366714 16.083847512143056 35.72168548350274 35.8161875939875 5 14.275240194333694 37.06775592939703 33.661115184368875 14.995888691900404 6 34.83061079518873 35.46229753126434 16.49436691725046 13.21272475629647 7 30.68670234664471 30.297279089786294 20.085781653505 18.930236910064 8 28.040083835472885 34.01283730678543 18.658557580747782 19.2885212769939 9 27.114188405254687 14.258617463228415 18.356562745611736 40.27063138590516 10 15.90696354914613 27.27303689248733 31.734844767710157 25.085154790656382 11 37.19446835585164 21.09704704517385 22.037389123844456 19.671095475130056 12 24.07432912908417 23.772184587746548 29.191736217672815 22.961750065496464 13 29.74448894045436 19.613757999925145 25.020023204461246 25.62172985515925 14 23.222014296942252 19.57475953441371 25.43684269620869 31.766383472435344 15 25.16157041805457 27.37149593921928 22.07661214865826 25.39032149406789 16 25.538075179133834 26.065380807931476 23.731260888848134 24.665283124086553 17 23.998502937984206 26.254013997529846 25.158014895767057 24.589468168718888 18 24.564083121467633 25.654619171322846 25.902046373793603 23.879251333415922 19 25.546053370260864 25.248400014970617 25.182379580074105 24.023167034694414 20 25.61409759690526 24.876229841969426 25.100827579599144 24.40884498152617 21 26.277490279385564 24.63622315065053 24.635699178748897 24.450587391215013 22 25.60922938732737 24.740222313709346 25.142295744601217 24.508252554362066 23 24.729855159249972 24.69070698753696 25.296642838429584 25.28279501478349 24 24.642339449009068 25.17967705848735 25.378600886193485 24.799382606310097 25 24.909624068311068 24.858574158041392 25.318734456256703 24.91306731739084 26 24.554323303486818 25.52285047449523 25.539655045937486 24.38317117608047 27 25.040682842993416 25.18608564430844 24.99397429832388 24.779257214374255 28 24.709734694778852 25.056234107548807 25.429531271403583 24.804499926268758 29 24.56468129524648 25.328559190057387 25.29113254161001 24.815626973086122 30 24.631550739293846 25.34146445528494 25.513590835495986 24.51339396992523 31 24.973436456148164 25.037997376393907 25.024710926140436 24.963855241317493 32 24.894316105907333 25.17445561800423 24.956182587336347 24.97504568875209 33 24.657593718924257 24.90992361612471 25.27210047984598 25.16038218510505 34 24.979143937706898 25.085922485436313 25.464606448256568 24.470327128600218 35 25.236311592966192 24.952879902511178 25.455856066254075 24.35495243826856 36 24.570819908102745 25.304568252443865 25.230014480348608 24.894597359104786 37 25.29334422711361 25.12267666618885 25.0515651824702 24.532413924227345 38 24.745387177663837 25.09461431939818 25.35929488379056 24.800703619147423 39 25.146637883025036 25.05917164192511 24.90516069535849 24.889029779691366 40 25.36542389171439 25.12649252572236 25.18603823425828 24.322045348304968 41 24.512495723975007 25.474666844319753 25.508425921282218 24.504411510423022 42 25.2669653179948 25.413271781566582 25.093822902931333 24.225939997507286 43 24.928559478374716 24.8640337629683 25.31069843098462 24.89670832767236 44 24.618534892529542 25.321655331004816 25.146006219019064 24.913803557446577 45 24.851217265646376 25.458025509675135 25.10153081255715 24.58922641212134 46 24.676871346627014 25.31871223116901 24.940097595445245 25.06431882675873 47 24.9134783625731 25.177150877192982 25.251443274853802 24.657927485380114 48 25.268441517757058 25.463440340652838 24.657807008055585 24.61031113353452 49 24.82846898368902 25.501755357771106 24.901602652873322 24.76817300566655 50 24.896794510478493 25.644664715961273 24.817860556751977 24.640680216808253 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 26.0 1 35.5 2 45.0 3 131.0 4 217.0 5 236.0 6 255.0 7 230.0 8 205.0 9 295.5 10 386.0 11 601.0 12 816.0 13 1551.5 14 2287.0 15 2961.5 16 3636.0 17 3962.5 18 4289.0 19 4733.0 20 5177.0 21 6560.5 22 7944.0 23 9728.5 24 11513.0 25 15006.0 26 18499.0 27 23736.0 28 28973.0 29 34268.5 30 39564.0 31 44471.5 32 49379.0 33 56349.0 34 63319.0 35 71398.0 36 79477.0 37 91367.0 38 103257.0 39 111864.5 40 120472.0 41 129958.5 42 139445.0 43 145569.5 44 151694.0 45 162165.5 46 172637.0 47 181482.5 48 190328.0 49 197245.0 50 204162.0 51 200232.0 52 196302.0 53 194428.5 54 192555.0 55 190615.5 56 188676.0 57 182951.5 58 177227.0 59 162478.5 60 147730.0 61 130052.5 62 112375.0 63 97256.5 64 82138.0 65 69365.5 66 56593.0 67 48757.0 68 40921.0 69 35848.0 70 30775.0 71 24185.5 72 17596.0 73 14945.0 74 12294.0 75 9452.5 76 6611.0 77 5726.0 78 4841.0 79 4091.5 80 3342.0 81 2555.5 82 1769.0 83 1450.5 84 1132.0 85 849.0 86 566.0 87 407.0 88 248.0 89 159.5 90 71.0 91 56.0 92 41.0 93 34.5 94 28.0 95 30.0 96 32.0 97 29.5 98 27.0 99 17.5 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.032149406789176244 2 0.005389423256858416 3 2.9941240315880087E-4 4 7.485310078970022E-5 5 3.742655039485011E-5 6 2.2455930236910064E-4 7 0.0 8 0.0 9 0.0 10 3.742655039485011E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 5.613982559227516E-4 17 0.0 18 1.1227965118455032E-4 19 0.0 20 4.491186047382013E-4 21 3.742655039485011E-5 22 0.0 23 0.0 24 8.608106590815524E-4 25 1.871327519742505E-4 26 2.9941240315880087E-4 27 4.491186047382013E-4 28 0.0012725027134249036 29 2.6198585276395077E-4 30 9.730903102661027E-4 31 1.871327519742505E-4 32 6.362513567124518E-4 33 3.742655039485011E-5 34 5.613982559227516E-4 35 1.4970620157940044E-4 36 1.1227965118455032E-4 37 0.0014596354653991543 38 0.0 39 4.491186047382013E-4 40 1.1227965118455032E-4 41 9.730903102661027E-4 42 0.004154347093828362 43 0.0036303753883004603 44 0.0035929488379056102 45 0.0019087540701373555 46 0.0020210337213219056 47 9.356637598712527E-4 48 0.0033309629851416595 49 0.002994124031588008 50 0.0017216213181631048 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2671900.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.68330467512709 #Duplication Level Percentage of deduplicated Percentage of total 1 68.14808512005692 33.85822076046283 2 16.724384738149173 16.618454048990223 3 6.585960409273954 9.816368327768478 4 3.15865546452951 6.277297672318989 5 1.6834477511253225 4.181962376190847 6 0.9803340620501262 2.922374153294483 7 0.6223698454813733 2.164497345756399 8 0.431486720300525 1.7150148950369863 9 0.293762497865853 1.3135582515235995 >10 1.2406736621930454 10.536722174156173 >50 0.07359542915962189 2.5407520285604392 >100 0.04998882463336903 4.98089411156298 >500 0.005139294920177263 1.6802311308393114 >1k 0.0021161802612094534 1.3936527235383527 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.742655039485011E-5 2 0.0 0.0 0.0 0.0 3.742655039485011E-5 3 0.0 0.0 0.0 0.0 3.742655039485011E-5 4 0.0 0.0 0.0 0.0 3.742655039485011E-5 5 0.0 0.0 0.0 0.0 3.742655039485011E-5 6 0.0 0.0 0.0 0.0 1.4970620157940044E-4 7 0.0 0.0 0.0 0.0 1.4970620157940044E-4 8 0.0 0.0 0.0 0.0 1.4970620157940044E-4 9 0.0 0.0 0.0 0.0 2.9941240315880087E-4 10 0.0 0.0 0.0 2.2455930236910064E-4 2.9941240315880087E-4 11 0.0 0.0 0.0 2.2455930236910064E-4 2.9941240315880087E-4 12 0.0 0.0 0.0 2.2455930236910064E-4 5.239717055279015E-4 13 0.0 0.0 0.0 2.2455930236910064E-4 6.73677907107302E-4 14 0.0 0.0 0.0 2.2455930236910064E-4 6.73677907107302E-4 15 0.0 0.0 0.0 2.6198585276395077E-4 8.233841086867024E-4 16 0.0 0.0 0.0 2.6198585276395077E-4 9.356637598712527E-4 17 0.0 0.0 0.0 3.36838953553651E-4 9.730903102661028E-4 18 0.0 0.0 0.0 3.742655039485011E-4 0.001047943411055803 19 0.0 0.0 0.0 3.742655039485011E-4 0.001047943411055803 20 0.0 0.0 0.0 4.491186047382013E-4 0.0011227965118455032 21 0.0 0.0 0.0 4.865451551330514E-4 0.0011602230622403532 22 3.742655039485011E-5 0.0 0.0 5.239717055279015E-4 0.0011976496126352035 23 3.742655039485011E-5 0.0 0.0 5.988248063176017E-4 0.0013099292638197536 24 3.742655039485011E-5 0.0 0.0 7.485310078970022E-4 0.0013099292638197536 25 3.742655039485011E-5 0.0 0.0 9.730903102661028E-4 0.0013099292638197536 26 3.742655039485011E-5 0.0 0.0 0.001047943411055803 0.001422208915004304 27 3.742655039485011E-5 0.0 0.0 0.0012350761630300535 0.0014596354653991543 28 3.742655039485011E-5 0.0 0.0 0.001422208915004304 0.0014596354653991543 29 3.742655039485011E-5 0.0 0.0 0.0016841947677682548 0.0014596354653991543 30 3.742655039485011E-5 0.0 0.0 0.0022081664732961563 0.0014596354653991543 31 3.742655039485011E-5 0.0 0.0 0.0029192709307983085 0.0015344885661888543 32 3.742655039485011E-5 0.0 0.0 0.004977731202515065 0.0015344885661888543 33 3.742655039485011E-5 0.0 0.0 0.006399940117519368 0.0015344885661888543 34 3.742655039485011E-5 0.0 0.0 0.008233841086867023 0.0017964744189528051 35 3.742655039485011E-5 0.0 0.0 0.00995546240503013 0.0017964744189528051 36 3.742655039485011E-5 0.0 0.0 0.013211572289382087 0.0017964744189528051 37 3.742655039485011E-5 0.0 0.0 0.01751562558478985 0.0017964744189528051 38 3.742655039485011E-5 0.0 0.0 0.023017328492832816 0.0018713275197425054 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2850 0.0 24.785389 1 GGTATCA 1340 0.0 24.633266 1 GATATAC 480 0.0 18.79655 1 TAGATCG 110 2.7995538E-6 17.999624 5 GGACCGT 175 1.9281288E-10 17.599632 6 TACGAAT 475 0.0 17.137766 41 CGGATCG 155 1.441731E-8 17.031902 26 TACCGTC 530 0.0 16.603428 7 GTCCTAA 545 0.0 16.55476 1 ATACCGT 520 0.0 16.499657 6 TTAACGG 175 3.6325218E-9 16.342516 35 ATACGAA 510 0.0 15.961348 40 CGCAATA 510 0.0 15.960751 36 TAACGGC 180 5.2750693E-9 15.888854 36 ATCAACG 4475 0.0 15.780677 3 TCAACGC 4485 0.0 15.745492 4 ACCGTCG 520 0.0 15.65352 8 TAGGACG 450 0.0 15.644118 4 CAACGCA 4575 0.0 15.483831 5 TATCAAC 4715 0.0 15.304889 2 >>END_MODULE