##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062144_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1050214 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.276591247117253 32.0 32.0 32.0 32.0 32.0 2 31.499143031801136 32.0 32.0 32.0 32.0 32.0 3 31.596407017998235 32.0 32.0 32.0 32.0 32.0 4 31.678634068865964 32.0 32.0 32.0 32.0 32.0 5 31.659802668789407 32.0 32.0 32.0 32.0 32.0 6 35.30463029439714 36.0 36.0 36.0 36.0 36.0 7 35.31434069627714 36.0 36.0 36.0 36.0 36.0 8 35.27356710156216 36.0 36.0 36.0 36.0 36.0 9 35.33972885526188 36.0 36.0 36.0 36.0 36.0 10 35.22918090979553 36.0 36.0 36.0 36.0 36.0 11 35.34690453564702 36.0 36.0 36.0 36.0 36.0 12 35.264270900978275 36.0 36.0 36.0 36.0 36.0 13 35.297168957945715 36.0 36.0 36.0 36.0 36.0 14 35.27102285819842 36.0 36.0 36.0 36.0 36.0 15 35.246608786399726 36.0 36.0 36.0 36.0 36.0 16 35.252842753953004 36.0 36.0 36.0 36.0 36.0 17 35.23935788325046 36.0 36.0 36.0 36.0 36.0 18 35.228689581361515 36.0 36.0 36.0 36.0 36.0 19 35.21940956795472 36.0 36.0 36.0 36.0 36.0 20 35.217648022212614 36.0 36.0 36.0 36.0 36.0 21 35.20013444878853 36.0 36.0 36.0 36.0 36.0 22 35.18108214135405 36.0 36.0 36.0 36.0 36.0 23 35.15219183899662 36.0 36.0 36.0 36.0 36.0 24 35.13441070105712 36.0 36.0 36.0 36.0 36.0 25 35.11143633583251 36.0 36.0 36.0 36.0 36.0 26 35.07913815660427 36.0 36.0 36.0 36.0 36.0 27 35.055886704995366 36.0 36.0 36.0 36.0 36.0 28 35.026154669429275 36.0 36.0 36.0 36.0 36.0 29 35.00685479340401 36.0 36.0 36.0 36.0 36.0 30 34.98319485362031 36.0 36.0 36.0 36.0 36.0 31 34.98898795864462 36.0 36.0 36.0 36.0 36.0 32 34.948492402500825 36.0 36.0 36.0 36.0 36.0 33 34.937069016409986 36.0 36.0 36.0 36.0 36.0 34 34.916123761442904 36.0 36.0 36.0 36.0 36.0 35 34.89236669859667 36.0 36.0 36.0 36.0 36.0 36 34.868655340721034 36.0 36.0 36.0 32.0 36.0 37 34.84183414047042 36.0 36.0 36.0 32.0 36.0 38 34.83126867476533 36.0 36.0 36.0 32.0 36.0 39 34.78277474876549 36.0 36.0 36.0 32.0 36.0 40 34.773167183069354 36.0 36.0 36.0 32.0 36.0 41 34.74614792794611 36.0 36.0 36.0 32.0 36.0 42 34.70108473130238 36.0 36.0 36.0 32.0 36.0 43 34.71079227662172 36.0 36.0 36.0 32.0 36.0 44 34.6574412453081 36.0 36.0 36.0 32.0 36.0 45 34.61365588346756 36.0 36.0 36.0 32.0 36.0 46 34.60392072472848 36.0 36.0 36.0 32.0 36.0 47 34.57480094533114 36.0 36.0 36.0 32.0 36.0 48 34.54060600982276 36.0 36.0 36.0 32.0 36.0 49 34.52958254222473 36.0 36.0 36.0 32.0 36.0 50 34.127724444732216 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 5.0 20 13.0 21 41.0 22 109.0 23 241.0 24 558.0 25 1402.0 26 2997.0 27 5513.0 28 9129.0 29 13777.0 30 20191.0 31 28483.0 32 42613.0 33 70056.0 34 158810.0 35 696275.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.72965239770716 18.03923884489436 12.139219985560228 26.09188877183825 2 15.810728712169833 20.255219710632915 37.48602585906448 26.44802571813277 3 18.25391611035095 24.090732070541883 29.020779594234693 28.63457222487248 4 12.542408063887992 16.25651177427817 35.91814231970086 35.28293784213298 5 14.251857240524313 36.82201913133895 33.50307651583392 15.423047112302827 6 33.816983095745705 35.45170532722534 16.971955106078884 13.759356470950069 7 29.87257835069805 30.81267246485002 20.61551264789843 18.699236536553503 8 27.766626611338264 33.282359595282486 19.414328889159734 19.53668490421952 9 27.146467291428223 14.626542780804675 18.861774838271057 39.36521508949605 10 16.171306364810153 26.917041511618606 31.521445193922755 25.39020692964849 11 36.37353910726766 21.557320698448127 22.60843980369715 19.46070039058706 12 24.528928893472084 23.88334556894649 28.902232213846148 22.68549332373528 13 29.365729270415365 20.003637353910726 25.27008781067478 25.360545564999132 14 23.2943000188533 20.090095923307057 25.563456590751983 31.05214746708766 15 24.906257200913338 27.322717084327575 22.762217986048558 25.00880772871053 16 25.341457469215506 25.98733198502386 24.16987556703269 24.501334978727943 17 23.74677922785261 26.208753644495314 25.621444772208328 24.423022355443745 18 24.289309481618456 25.362236731475868 26.744816041728757 23.603637745176922 19 25.403608601302786 25.47007130934391 25.659175805289024 23.467144284064283 20 25.44933784797736 24.834128728294857 25.69271727993967 24.023816143788114 21 26.002058630011245 24.541212116018368 25.060916214139418 24.39581303983097 22 25.264755564104078 25.030422371059615 25.355498974494722 24.34932309034159 23 24.158813497833297 24.904852634656017 25.855802584808984 25.080531282701703 24 24.483031472783036 25.347145187291293 25.731925740495466 24.437897599430208 25 24.80392072846175 24.820298358523463 25.71468835369587 24.66109255931892 26 24.116319593224212 25.400919816036794 26.219327563058815 24.26343302768018 27 24.66363870083126 25.424248483636607 25.454813799144933 24.4572990163872 28 24.324833886568666 25.007284423902053 25.898174228184338 24.769707461344943 29 24.413449526189098 25.225098266248207 25.818980620981748 24.542471586580945 30 24.55194334042403 25.121738484596296 26.0540353189196 24.272282856060073 31 24.846173622418373 24.77809200064749 25.47376239037907 24.90197198655507 32 24.333869418124237 25.287586161585285 25.52868148850655 24.849862931783925 33 24.295403495107173 24.920611191465333 25.94535764717757 24.838627666249923 34 24.671801546939022 25.1504709089576 26.0817194390037 24.09600810509968 35 25.132806392607975 24.952462024370295 25.81619157256671 24.09854001045502 36 24.319470735432468 25.317459712896063 25.693574249770524 24.669495301900948 37 25.12866707103755 25.081437567071134 25.252263635852906 24.537631726038406 38 24.469203419493553 25.29893907336981 25.627919643044176 24.60393786409246 39 24.946201133489744 25.035040677656234 25.198436881074986 24.820321307779032 40 25.172536592611777 25.116167021515658 25.76194139849859 23.949354987373976 41 24.441801584256087 25.255734810880504 25.952358054444403 24.350105550419013 42 25.119718598209246 25.678579964596242 25.374724687693718 23.826976749500794 43 24.615967670057856 25.07208343014287 25.62237423964836 24.68957466015091 44 24.388787688053423 25.30321367934814 25.527463727197674 24.78053490540076 45 24.384823259879678 25.63888682576229 25.500911267146964 24.475378647211066 46 24.66755983922894 25.1315715552153 25.48760270770309 24.713265897852672 47 24.92446741553348 25.219361098600373 25.499781472068893 24.356390013797256 48 25.038850778729582 25.861477929329673 24.79212928929737 24.307542002643377 49 24.59337806864938 25.503510360634447 25.295735861669034 24.60737570904714 50 24.41996872982531 26.044132462135856 24.931965469500152 24.60393333853868 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 223.0 1 151.5 2 80.0 3 257.5 4 435.0 5 419.5 6 404.0 7 320.0 8 236.0 9 326.0 10 416.0 11 611.0 12 806.0 13 1388.5 14 1971.0 15 2527.5 16 3084.0 17 3182.5 18 3281.0 19 3097.0 20 2913.0 21 3424.0 22 3935.0 23 4382.5 24 4830.0 25 6169.0 26 7508.0 27 9793.5 28 12079.0 29 14240.5 30 16402.0 31 18089.5 32 19777.0 33 22649.5 34 25522.0 35 29386.5 36 33251.0 37 38353.0 38 43455.0 39 46501.5 40 49548.0 41 52690.0 42 55832.0 43 57086.0 44 58340.0 45 62896.0 46 67452.0 47 70897.0 48 74342.0 49 75810.0 50 77278.0 51 76035.5 52 74793.0 53 73751.0 54 72709.0 55 72353.0 56 71997.0 57 69632.5 58 67268.0 59 61312.0 60 55356.0 61 49093.5 62 42831.0 63 37057.5 64 31284.0 65 26298.0 66 21312.0 67 18384.0 68 15456.0 69 13939.5 70 12423.0 71 9911.0 72 7399.0 73 6480.5 74 5562.0 75 4224.0 76 2886.0 77 2502.0 78 2118.0 79 1813.0 80 1508.0 81 1203.5 82 899.0 83 719.5 84 540.0 85 405.5 86 271.0 87 188.0 88 105.0 89 67.0 90 29.0 91 24.0 92 19.0 93 17.5 94 16.0 95 12.5 96 9.0 97 13.0 98 17.0 99 12.0 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03199347942419355 2 0.005713121325748848 3 9.521868876248079E-5 4 9.521868876248079E-5 5 0.0 6 4.7609344381240395E-4 7 0.0 8 0.0 9 0.0 10 1.9043737752496158E-4 11 0.0 12 9.521868876248079E-5 13 0.0 14 0.0 15 0.0 16 9.521868876248079E-4 17 0.0 18 2.8565606628744235E-4 19 9.521868876248079E-5 20 1.9043737752496158E-4 21 9.521868876248079E-5 22 0.0 23 9.521868876248079E-5 24 4.7609344381240395E-4 25 9.521868876248079E-5 26 3.8087475504992315E-4 27 3.8087475504992315E-4 28 0.0026661232853494622 29 5.713121325748847E-4 30 0.0011426242651497694 31 3.8087475504992315E-4 32 6.665308213373656E-4 33 2.8565606628744235E-4 34 0.0010474055763872885 35 9.521868876248079E-5 36 1.9043737752496158E-4 37 0.002190029841537058 38 0.0 39 5.713121325748847E-4 40 1.9043737752496158E-4 41 4.7609344381240395E-4 42 0.004094403616786675 43 0.003999184928024193 44 0.004475278371836597 45 0.0026661232853494622 46 0.0023804672190620197 47 4.7609344381240395E-4 48 0.003999184928024193 49 0.0035230914842117895 50 0.0011426242651497694 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1050214.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.14509717066282 #Duplication Level Percentage of deduplicated Percentage of total 1 81.11182636987513 51.21814157815696 2 12.054307462154618 15.223408320455986 3 3.2432688982850753 6.143895891983989 4 1.2432952806293185 3.140320052286593 5 0.6163129490025725 1.9458570526152599 6 0.3688925843606672 1.3976254850994758 7 0.2609483652430839 1.1534326915860105 8 0.1810353087713749 0.9145193730951531 9 0.12643295846760894 0.7185259303210388 >10 0.6720803134456633 7.836174077019462 >50 0.06558340456064783 2.9256065885429305 >100 0.05359378798511351 6.337315541053679 >500 0.0022709223929834542 0.9236718385277441 >1k 1.5139482619889696E-4 0.12150557925571961 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1271 0.12102295341711308 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 1.9043737752496158E-4 13 0.0 0.0 0.0 0.0 1.9043737752496158E-4 14 0.0 0.0 0.0 0.0 1.9043737752496158E-4 15 0.0 0.0 0.0 0.0 1.9043737752496158E-4 16 0.0 0.0 0.0 0.0 1.9043737752496158E-4 17 0.0 0.0 0.0 0.0 1.9043737752496158E-4 18 0.0 0.0 0.0 9.521868876248079E-5 1.9043737752496158E-4 19 0.0 0.0 0.0 9.521868876248079E-5 1.9043737752496158E-4 20 0.0 0.0 0.0 2.8565606628744235E-4 1.9043737752496158E-4 21 0.0 0.0 0.0 3.8087475504992315E-4 1.9043737752496158E-4 22 0.0 0.0 0.0 0.0011426242651497694 1.9043737752496158E-4 23 0.0 0.0 0.0 0.001809155086487135 1.9043737752496158E-4 24 0.0 0.0 0.0 0.0023804672190620197 1.9043737752496158E-4 25 0.0 0.0 0.0 0.0025709045965869814 1.9043737752496158E-4 26 0.0 0.0 0.0 0.003046998040399385 1.9043737752496158E-4 27 0.0 0.0 0.0 0.004380059683074117 1.9043737752496158E-4 28 0.0 0.0 0.0 0.005903558703273809 1.9043737752496158E-4 29 0.0 0.0 0.0 0.007998369856048387 1.9043737752496158E-4 30 0.0 0.0 0.0 0.01209277347283506 1.9043737752496158E-4 31 0.0 0.0 0.0 0.02151942366032066 1.9043737752496158E-4 32 0.0 0.0 0.0 0.03180304204666858 1.9043737752496158E-4 33 0.0 0.0 0.0 0.03999184928024193 1.9043737752496158E-4 34 0.0 0.0 0.0 0.05141809193173963 1.9043737752496158E-4 35 0.0 0.0 0.0 0.06208258507313748 1.9043737752496158E-4 36 0.0 0.0 0.0 0.07646060707627207 1.9043737752496158E-4 37 0.0 0.0 0.0 0.1020744343533794 1.9043737752496158E-4 38 0.0 0.0 0.0 0.13359182033376055 1.9043737752496158E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGTTG 50 0.0025805717 21.999475 33 GACGGTA 230 0.0 20.08648 8 TACGACG 235 0.0 19.659105 5 ACGGTAT 235 0.0 19.659105 9 CGACGGT 240 0.0 19.249542 7 GTATAAT 105 1.7861148E-6 18.86388 1 TGTAGGA 420 0.0 18.85849 2 AATCGTA 130 3.5868652E-8 18.61494 26 GTATCAA 2300 0.0 18.467463 1 ACGACGG 265 0.0 18.263716 6 GTCTACG 85 1.4266986E-4 18.124117 1 TAACCTA 110 2.7963524E-6 17.99957 5 CTACGAC 295 0.0 17.897879 4 GTCCTAA 260 0.0 17.775578 1 CGTAAAC 155 1.4388206E-8 17.031853 32 TAGGACG 340 0.0 16.823128 4 GTCCTAC 380 0.0 16.795471 1 TTGTCGA 145 1.2477358E-7 16.690847 44 ATACGAA 240 0.0 16.500393 40 GTCGTAA 160 2.1287633E-8 16.499607 30 >>END_MODULE