##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062142_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 841244 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.259292191088434 32.0 32.0 32.0 32.0 32.0 2 31.464894846203954 32.0 32.0 32.0 32.0 32.0 3 31.590501685598948 32.0 32.0 32.0 32.0 32.0 4 31.668364945247752 32.0 32.0 32.0 32.0 32.0 5 31.648796306422394 32.0 32.0 32.0 32.0 32.0 6 35.3031153862613 36.0 36.0 36.0 36.0 36.0 7 35.309289575913766 36.0 36.0 36.0 36.0 36.0 8 35.26649818601975 36.0 36.0 36.0 36.0 36.0 9 35.33991208258246 36.0 36.0 36.0 36.0 36.0 10 35.23021263747498 36.0 36.0 36.0 36.0 36.0 11 35.34089039565215 36.0 36.0 36.0 36.0 36.0 12 35.274234348179604 36.0 36.0 36.0 36.0 36.0 13 35.297306132346854 36.0 36.0 36.0 36.0 36.0 14 35.27029969901717 36.0 36.0 36.0 36.0 36.0 15 35.24178003052622 36.0 36.0 36.0 36.0 36.0 16 35.264127886796224 36.0 36.0 36.0 36.0 36.0 17 35.24479699112267 36.0 36.0 36.0 36.0 36.0 18 35.242540808612006 36.0 36.0 36.0 36.0 36.0 19 35.222949584187226 36.0 36.0 36.0 36.0 36.0 20 35.21862503625583 36.0 36.0 36.0 36.0 36.0 21 35.20782436486917 36.0 36.0 36.0 36.0 36.0 22 35.17991926242565 36.0 36.0 36.0 36.0 36.0 23 35.15966948947035 36.0 36.0 36.0 36.0 36.0 24 35.14110412674563 36.0 36.0 36.0 36.0 36.0 25 35.114400815934495 36.0 36.0 36.0 36.0 36.0 26 35.08175273761239 36.0 36.0 36.0 36.0 36.0 27 35.06726585865694 36.0 36.0 36.0 36.0 36.0 28 35.03529772574901 36.0 36.0 36.0 36.0 36.0 29 35.016754948623706 36.0 36.0 36.0 36.0 36.0 30 34.98487834682922 36.0 36.0 36.0 36.0 36.0 31 34.980411153006735 36.0 36.0 36.0 36.0 36.0 32 34.94076391629539 36.0 36.0 36.0 36.0 36.0 33 34.93469314491396 36.0 36.0 36.0 36.0 36.0 34 34.92448564269106 36.0 36.0 36.0 36.0 36.0 35 34.90585965546263 36.0 36.0 36.0 36.0 36.0 36 34.875353642938315 36.0 36.0 36.0 32.0 36.0 37 34.84098073804984 36.0 36.0 36.0 32.0 36.0 38 34.81912976496712 36.0 36.0 36.0 32.0 36.0 39 34.761758776288445 36.0 36.0 36.0 32.0 36.0 40 34.78082577706349 36.0 36.0 36.0 32.0 36.0 41 34.75759113883725 36.0 36.0 36.0 32.0 36.0 42 34.728566266148704 36.0 36.0 36.0 32.0 36.0 43 34.72732405818051 36.0 36.0 36.0 32.0 36.0 44 34.66655571986249 36.0 36.0 36.0 32.0 36.0 45 34.637729362705706 36.0 36.0 36.0 32.0 36.0 46 34.593765899073276 36.0 36.0 36.0 32.0 36.0 47 34.570191288139945 36.0 36.0 36.0 32.0 36.0 48 34.54309926727561 36.0 36.0 36.0 32.0 36.0 49 34.511270214111484 36.0 36.0 36.0 32.0 36.0 50 34.12578871290612 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 0.0 19 4.0 20 11.0 21 26.0 22 45.0 23 147.0 24 417.0 25 923.0 26 2053.0 27 3906.0 28 6676.0 29 10434.0 30 15680.0 31 23254.0 32 34666.0 33 59585.0 34 135565.0 35 547851.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.7642319249351 18.16834903130756 12.310057682772102 25.757361360985232 2 15.644688853701563 19.56367717055867 38.9908845808191 25.800749394920665 3 19.16808718537591 23.063636860736864 28.691149514646202 29.077126439241024 4 12.440029289956303 15.869949741097708 36.05826609164523 35.63175487730076 5 14.08261346602587 37.01582063684334 33.83029635907817 15.07126953805262 6 34.47038363560502 35.614170017866456 16.429893455026562 13.485552891501959 7 30.30832909358046 30.260780463218754 20.001212490074224 19.42967795312656 8 27.398115172292464 35.12631293655586 18.62705707262102 18.848514818530653 9 26.792226749908473 14.673626201197273 18.692555310944268 39.84159173794999 10 16.316331904099055 27.309707183298997 31.598242125045918 24.775718787556034 11 37.103860473299065 21.253286799073752 22.419773573422216 19.223079154204964 12 24.450485769272372 23.69779005590537 29.38496962233267 22.46675455248959 13 30.015429530552375 19.999310544859757 24.985022181436065 25.00023774315181 14 22.692940454850195 20.240382100793585 25.358397801351334 31.708279643004882 15 24.755481168364945 28.48305604557061 22.144229260476152 24.617233525588293 16 24.854767788939885 26.36349479755456 24.838601158529265 23.94313625497629 17 23.281235884000363 26.78057733546985 25.85765842014921 24.08052836038058 18 23.686525399350007 25.992639454520816 27.299397795164772 23.02143735096441 19 25.482499726595375 24.990371402351755 25.51471392366543 24.01241494738744 20 25.25937901193476 25.380985212305646 25.770410346631163 23.58922542912843 21 25.725829842471388 24.74216755186367 25.057177228009948 24.474825377654994 22 25.174146858699736 25.558696406750002 25.531712559019738 23.735444175530525 23 23.981270594500526 25.644165069825164 25.976529996053465 24.398034339620846 24 24.590929785542006 25.31842988361187 26.082780476845407 24.007859854000717 25 24.35161344773561 25.26252849952808 26.25546513369518 24.13039291904113 26 23.64643103802843 26.171278316863578 26.408785137160784 23.773505507947206 27 24.034553630758296 25.879442681841034 26.02886443037267 24.05713925702799 28 23.7242299138055 25.93561624132082 25.790353966836932 24.549799878036747 29 24.085102740947313 25.236852178089066 25.787466626725724 24.8905784542379 30 24.022153117555597 25.797160368790685 26.06379184913627 24.11689466451745 31 24.84350519826637 25.203568057705155 25.578252155741154 24.374674588287316 32 24.292765152145538 25.89576740835487 25.559119103602562 24.25234833589703 33 23.77832273985695 25.663157168992 26.280578336053523 24.27794175509753 34 24.243699426912638 25.74352171158288 26.31744118454697 23.695337676957514 35 24.365017004599146 25.730496420178234 26.287648158736538 23.61683841648608 36 23.64994098005209 25.79189554479632 26.207115440165186 24.35104803498641 37 24.357991362616747 25.67559053620485 25.524620583980308 24.441797517198093 38 24.188226008149837 25.925771833142345 25.686126736119363 24.199875422588452 39 25.029004940349676 25.142528374915006 25.66925333675687 24.15921334797845 40 25.4300773616216 25.254028557707397 25.712397354394206 23.6034967262768 41 24.455296188826694 25.36443356628394 26.535328331968277 23.64494191292109 42 24.708722802537775 26.2758719890063 25.80274343236936 23.21266177608656 43 24.089851630213182 25.722145150610608 26.234146329865705 23.953856889310504 44 23.7088180540795 26.029296034502845 25.921474644736247 24.340411266681407 45 23.95372446274586 26.182505925903033 25.733635116532856 24.130134494818254 46 24.071086807928914 25.342803649439805 25.679574430146513 24.90653511248477 47 24.758450660694503 25.52529848936565 25.77077062798073 23.945480221959116 48 24.511365608602723 25.91539450941606 25.173497602297612 24.399742279683604 49 24.551960248210932 25.90939349991679 25.204346068804835 24.33430018306745 50 24.2686339353854 26.47372788070858 25.10419217482888 24.153446009077143 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 194.0 1 109.0 2 24.0 3 74.5 4 125.0 5 138.5 6 152.0 7 116.0 8 80.0 9 125.5 10 171.0 11 292.0 12 413.0 13 773.5 14 1134.0 15 1483.5 16 1833.0 17 1891.5 18 1950.0 19 1942.5 20 1935.0 21 2232.0 22 2529.0 23 3043.5 24 3558.0 25 4596.0 26 5634.0 27 7806.5 28 9979.0 29 11864.5 30 13750.0 31 16118.5 32 18487.0 33 21707.5 34 24928.0 35 28872.0 36 32816.0 37 35486.5 38 38157.0 39 39701.5 40 41246.0 41 42791.0 42 44336.0 43 45591.0 44 46846.0 45 50292.0 46 53738.0 47 56615.0 48 59492.0 49 61385.0 50 63278.0 51 62812.0 52 62346.0 53 60695.0 54 59044.0 55 57955.5 56 56867.0 57 54288.0 58 51709.0 59 46942.0 60 42175.0 61 36752.0 62 31329.0 63 26831.5 64 22334.0 65 18970.0 66 15606.0 67 13205.5 68 10805.0 69 9469.0 70 8133.0 71 6499.5 72 4866.0 73 4283.0 74 3700.0 75 2850.0 76 2000.0 77 1730.0 78 1460.0 79 1210.0 80 960.0 81 742.0 82 524.0 83 416.0 84 308.0 85 237.0 86 166.0 87 114.0 88 62.0 89 41.0 90 20.0 91 18.0 92 16.0 93 14.0 94 12.0 95 10.5 96 9.0 97 7.0 98 5.0 99 4.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03150096761462786 2 0.003803890428936194 3 2.3774315180851214E-4 4 0.0 5 1.1887157590425607E-4 6 3.5661472771276824E-4 7 0.0 8 0.0 9 0.0 10 1.1887157590425607E-4 11 0.0 12 1.1887157590425607E-4 13 0.0 14 0.0 15 0.0 16 5.943578795212804E-4 17 0.0 18 2.3774315180851214E-4 19 0.0 20 4.7548630361702427E-4 21 0.0 22 0.0 23 0.0 24 8.321010313297925E-4 25 2.3774315180851214E-4 26 5.943578795212804E-4 27 1.1887157590425607E-4 28 8.321010313297925E-4 29 2.3774315180851214E-4 30 9.509726072340485E-4 31 2.3774315180851214E-4 32 0.0011887157590425607 33 3.5661472771276824E-4 34 0.0013075873349468168 35 1.1887157590425607E-4 36 3.5661472771276824E-4 37 0.0020208167903723534 38 0.0 39 9.509726072340485E-4 40 0.0 41 8.321010313297925E-4 42 0.004160505156648963 43 0.004160505156648963 44 0.004517119884361731 45 0.0026151746698936337 46 0.0022585599421808657 47 9.509726072340485E-4 48 0.0026151746698936337 49 0.002852917821702146 50 0.0011887157590425607 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 841244.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.16319714432406 #Duplication Level Percentage of deduplicated Percentage of total 1 77.23554164163797 48.78443743259429 2 14.184428496315965 17.918677069847462 3 4.251654198050024 8.0564421690278 4 1.7115060852601531 4.324167851079894 5 0.826011561713022 2.60867655579853 6 0.439199438556216 1.6644744433921623 7 0.27309790069463324 1.2074815578893305 8 0.18802790595891802 0.950115495417405 9 0.1321119123236076 0.7510149686888715 >10 0.6713162724352993 7.556902159863929 >50 0.05567319951646973 2.369050129942049 >100 0.031052696126287874 3.6706650544690254 >500 3.786914114090136E-4 0.137895111989352 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 1.1887157590425608E-4 0.0 16 0.0 0.0 0.0 1.1887157590425608E-4 0.0 17 0.0 0.0 0.0 1.1887157590425608E-4 0.0 18 0.0 0.0 0.0 3.5661472771276824E-4 0.0 19 0.0 0.0 0.0 4.754863036170243E-4 0.0 20 0.0 0.0 0.0 5.943578795212804E-4 0.0 21 0.0 0.0 0.0 7.132294554255365E-4 0.0 22 0.0 0.0 0.0 9.509726072340486E-4 0.0 23 0.0 0.0 0.0 0.0015453304867553291 0.0 24 0.0 0.0 0.0 0.0021396883662766096 0.0 25 0.0 0.0 0.0 0.002852917821702146 0.0 26 0.0 0.0 0.0 0.003447275701223426 0.0 27 0.0 0.0 0.0 0.004398248308457475 0.0 28 0.0 0.0 0.0 0.005705835643404292 0.0 29 0.0 0.0 0.0 0.007845524009680901 0.0 30 0.0 0.0 0.0 0.01093618498319156 0.0 31 0.0 0.0 0.0 0.016642020626595852 0.0 32 0.0 0.0 0.0 0.02365544360494696 0.0 33 0.0 0.0 0.0 0.02971789397606402 0.0 34 0.0 0.0 0.0 0.036136959074893844 0.0 35 0.0 0.0 0.0 0.04291263890143644 0.0 36 0.0 0.0 0.0 0.05242236497377693 0.0 37 0.0 0.0 0.0 0.06585485305095787 0.0 38 0.0 0.0 0.0 0.08178364422212818 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGAAT 110 7.2759576E-12 25.998735 41 ATACGAA 115 1.2732926E-11 24.868355 40 GTATCAA 1135 0.0 24.818218 1 GGTATCA 565 0.0 23.370031 1 CTAGCGG 130 6.730261E-11 22.001545 29 CTACACG 80 3.614903E-6 21.99893 4 TGTAGGA 695 0.0 21.2076 2 ACTATAC 125 9.949872E-10 21.118973 3 GTAGGAC 615 0.0 20.746958 3 CGAAATT 75 5.4721484E-5 20.532335 13 TCTAGCG 140 1.8371793E-10 20.430006 28 CAATACG 140 1.8553692E-10 20.427578 38 TCGCGTA 140 1.8553692E-10 20.427578 9 CGAATGC 145 2.9467628E-10 19.724352 43 CGCAATA 145 2.9467628E-10 19.723177 36 CGCGTAA 145 2.9467628E-10 19.723177 10 TAGGACA 235 0.0 19.658619 4 GTCCTAA 370 0.0 19.627666 1 CTGTAGG 735 0.0 19.461777 1 TAGGACC 490 0.0 19.305182 4 >>END_MODULE