##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062141_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 125067 Sequences flagged as poor quality 0 Sequence length 25 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.795605555422295 32.0 32.0 32.0 32.0 32.0 2 30.71846290388352 32.0 32.0 32.0 32.0 32.0 3 30.748862609641233 32.0 32.0 32.0 32.0 32.0 4 30.65970239951386 32.0 32.0 32.0 32.0 32.0 5 30.86562402552232 32.0 32.0 32.0 32.0 32.0 6 34.3102656975861 36.0 36.0 36.0 32.0 36.0 7 34.15092710307275 36.0 36.0 36.0 32.0 36.0 8 34.08853654441219 36.0 36.0 36.0 32.0 36.0 9 33.935218722764596 36.0 36.0 36.0 32.0 36.0 10 33.993755347133934 36.0 36.0 36.0 32.0 36.0 11 34.246124077494464 36.0 36.0 36.0 32.0 36.0 12 34.051260524358945 36.0 36.0 36.0 32.0 36.0 13 33.96849688566928 36.0 36.0 36.0 32.0 36.0 14 33.908481054154976 36.0 36.0 36.0 32.0 36.0 15 33.732175553903105 36.0 36.0 36.0 32.0 36.0 16 33.8746112083923 36.0 36.0 36.0 32.0 36.0 17 33.700128731000184 36.0 36.0 36.0 27.0 36.0 18 33.68899869669857 36.0 36.0 36.0 27.0 36.0 19 33.69705038099578 36.0 36.0 36.0 27.0 36.0 20 33.6101609537288 36.0 36.0 36.0 27.0 36.0 21 33.544500147920715 36.0 36.0 36.0 27.0 36.0 22 33.25219282464599 36.0 36.0 36.0 21.0 36.0 23 33.181142907401636 36.0 36.0 36.0 21.0 36.0 24 33.183173818833104 36.0 36.0 36.0 21.0 36.0 25 32.38010026625729 36.0 32.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 4 5.0 5 10.0 6 25.0 7 3.0 8 14.0 9 15.0 10 9.0 11 3.0 12 5.0 13 9.0 14 73.0 15 104.0 16 136.0 17 175.0 18 229.0 19 270.0 20 406.0 21 534.0 22 716.0 23 927.0 24 1110.0 25 1324.0 26 1742.0 27 2170.0 28 2728.0 29 3459.0 30 4629.0 31 6457.0 32 8926.0 33 12485.0 34 24503.0 35 51866.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 48.42199531436156 16.542862397351733 12.239431326611388 22.795710961675315 2 10.950930301358472 23.672111748103017 36.45166190921666 28.92529604132185 3 20.277455723024026 31.75788589933235 25.89773317874705 22.066925198896573 4 12.229818879692935 20.227100075966575 31.264643556834994 36.2784374875055 5 10.957457869774212 39.956330131409516 34.329635524558306 14.75657647425797 6 32.382613426351874 29.878473194498895 20.821165985295174 16.917747393854054 7 25.012205174994197 32.13522533554227 23.96296029516515 18.88960919429838 8 30.46749317688866 30.89888989379157 22.335785118013813 16.297831811305954 9 28.848154966781397 16.236292323701274 18.203794124709837 36.71175858480749 10 16.142409953005036 31.131962179861816 31.886123275717132 20.839504591416013 11 30.056364189524587 25.923524042849593 18.364798001633282 25.65531376599254 12 23.863045061921113 28.76550029219402 28.993651784785097 18.37780286109977 13 32.35192878813349 20.87525915964234 22.184065384276714 24.588746667947454 14 24.418902478068773 22.98216686943715 25.409009412819362 27.189921239674714 15 32.35268218096816 21.190070206617193 26.46237101435353 19.99487659806111 16 21.130232930441046 25.630352997678703 32.92403746097815 20.315376610902106 17 25.90612192622951 25.692398821721312 29.48978611680328 18.9116931352459 18 28.33302651694027 21.087890890754686 31.048751790873947 19.5303308014311 19 22.038238989683954 32.6544005250058 29.25546814351226 16.051892341797984 20 22.52392842280483 23.925221678030667 33.476583757482636 20.07426614168187 21 20.75701196334974 29.321009882767175 27.9262193414156 21.995758812467493 22 21.370496630975815 29.197676093532433 22.416414590035373 27.01541268545638 23 17.3424234422386 31.102415760456424 25.428299365452784 26.126861431852188 24 19.188200741054924 36.28688268764455 24.382787678961563 20.142128892338963 25 23.393563049149368 25.130835587279737 21.878751020277516 29.596850343293372 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 402.0 1 402.0 2 342.5 3 283.0 4 283.0 5 283.0 6 787.5 7 1292.0 8 1292.0 9 1292.0 10 1040.5 11 789.0 12 789.0 13 789.0 14 634.5 15 480.0 16 480.0 17 480.0 18 788.5 19 1097.0 20 1097.0 21 1097.0 22 1537.0 23 1977.0 24 1977.0 25 1977.0 26 2695.0 27 3413.0 28 3413.0 29 3413.0 30 3951.5 31 4490.0 32 4490.0 33 4490.0 34 4939.0 35 5388.0 36 5388.0 37 5388.0 38 6446.5 39 7505.0 40 7505.0 41 7505.0 42 10247.0 43 12989.0 44 12989.0 45 12989.0 46 27121.0 47 41253.0 48 41253.0 49 41253.0 50 31787.0 51 22321.0 52 22321.0 53 22321.0 54 15615.5 55 8910.0 56 8910.0 57 8910.0 58 6995.5 59 5081.0 60 5081.0 61 5081.0 62 4256.5 63 3432.0 64 3432.0 65 3432.0 66 2717.5 67 2003.0 68 2003.0 69 2003.0 70 1517.0 71 1031.0 72 1031.0 73 1031.0 74 755.5 75 480.0 76 480.0 77 480.0 78 349.0 79 218.0 80 218.0 81 218.0 82 168.5 83 119.0 84 119.0 85 119.0 86 85.0 87 51.0 88 51.0 89 51.0 90 39.0 91 27.0 92 27.0 93 27.0 94 16.0 95 5.0 96 5.0 97 5.0 98 18.0 99 31.0 100 31.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0031982857188546936 2 0.0 3 0.0015991428594273468 4 0.009594857156564081 5 0.030383714329119592 6 0.05916828579881183 7 0.09594857156564082 8 0.09914685728449552 9 0.10954128587077326 10 0.12793142875418775 11 0.13192928590275613 12 0.11993571445705102 13 0.115138285878769 14 0.10474385729249124 15 0.11993571445705102 16 0.10954128587077326 17 0.11114042873020061 18 0.1023451430033502 19 0.09275028584678613 20 0.08875242869821776 21 0.08155628583079469 22 0.08395500011993572 23 0.07675885725251265 24 0.08795285726850409 25 0.08075671440108102 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 125067.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.975892921394134 #Duplication Level Percentage of deduplicated Percentage of total 1 86.26311111111112 38.79760448399658 2 9.685333333333332 8.712130298160186 3 1.9484444444444442 2.6289908608985586 4 0.632888888888889 1.138589715912271 5 0.3128888888888889 0.7036228581480327 6 0.19377777777777777 0.5229197150327425 7 0.1351111111111111 0.4253720006076743 8 0.09777777777777777 0.35181142907401636 9 0.051555555555555556 0.20868814315526876 >10 0.48177777777777775 4.194551720277931 >50 0.05333333333333334 1.7006884310009833 >100 0.09955555555555555 10.386432871980618 >500 0.017777777777777778 5.612991436589987 >1k 0.024888888888888887 20.281129314687327 >5k 0.0017777777777777776 4.3344767204778245 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTACATGGGAAGCAGTGGTATCAAC 5421 4.3344767204778245 No Hit CCCATGTACTCTGCGTTGATACCAC 4388 3.508519433583599 No Hit GTACATGGAAGCAGTGGTATCAACG 3029 2.4219018606027167 No Hit TCCATGTACTCTGCGTTGATACCAC 2701 2.159642431656632 No Hit GTATCAACGCAGAGTACATGGGAAG 1989 1.5903475737004964 No Hit CATGTACTCTGCGTTGATACCACTG 1886 1.507991716439988 No Hit GAGTACATGGGAAGCAGTGGTATCA 1762 1.4088448591554927 No Hit TATCAACGCAGAGTACATGGGAAGC 1453 1.1617772873739676 No Hit GCGTTGATACCACTGCTTCCCATGT 1412 1.128994858755707 No Hit GCTTCCCATGTACTCTGCGTTGATA 1302 1.0410420014872028 No Hit GAGTACATGGAAGCAGTGGTATCAA 1191 0.9522895727889851 No Hit ACGCAGAGTACATGGGAAGCAGTGG 1108 0.8859251441227503 No Hit ACTCTGCGTTGATACCACTGCTTCC 1094 0.8747311441067588 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 1038 0.829955144042793 No Hit GGTATCAACGCAGAGTACATGGGAA 1012 0.8091662868702375 No Hit CAGTGGTATCAACGCAGAGTACATG 931 0.74440100106343 No Hit GCTTCCATGTACTCTGCGTTGATAC 842 0.673239143818913 No Hit GTATCAACGCAGAGTACTTTTTTTT 817 0.6532498580760713 No Hit AAAAAGTACTCTGCGTTGATACCAC 717 0.5732927151047039 No Hit CATGGAAGCAGTGGTATCAACGCAG 687 0.5493055722132937 No Hit TATCAACGCAGAGTACTTTTTTTTT 678 0.5421094293458707 No Hit GTACTCTGCGTTGATACCACTGCTT 668 0.5341137150487338 No Hit GCGTTGATACCACTGCTTCCATGTA 668 0.5341137150487338 No Hit GTATCAACGCAGAGTACATGGAAGC 507 0.40538271486483246 No Hit GTGGTATCAACGCAGAGTACATGGG 505 0.4037835720054051 No Hit CTGCTTCCCATGTACTCTGCGTTGA 454 0.36300542909000777 No Hit GCAGTGGTATCAACGCAGAGTACAT 434 0.3470140004957343 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 431 0.34461528620659326 No Hit ATACCACTGCTTCCCATGTACTCTG 426 0.34061742905802495 No Hit TATCAACGCAGAGTACATGGAAGCA 411 0.3286238576123198 No Hit AAGCAGTGGTATCAACGCAGAGTAC 389 0.31103328615861897 No Hit AAAGTACTCTGCGTTGATACCACTG 383 0.30623585758033695 No Hit GGGAAGCAGTGGTATCAACGCAGAG 381 0.3046367147209096 No Hit ACGCAGAGTACATGGAAGCAGTGGT 380 0.30383714329119593 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 371 0.2966410004237729 No Hit GCAGAGTACATGGGAAGCAGTGGTA 350 0.2798500003997857 No Hit AAAAAAAAAAAAAAAAAAAAAAAAA 348 0.2782508575403584 No Hit GGTATCAACGCAGAGTACTTTTTTT 339 0.27105471467293535 No Hit TACCACTGCTTCCCATGTACTCTGC 337 0.26945557181350793 No Hit CCATGTACTCTGCGTTGATACCACT 335 0.2678564289540806 No Hit GAAGCAGTGGTATCAACGCAGAGTA 334 0.2670568575243669 No Hit CCACTGCTTCCCATGTACTCTGCGT 320 0.2558628575083755 No Hit ATCAACGCAGAGTACATGGGAAGCA 318 0.25426371464894815 No Hit CATGGGAAGCAGTGGTATCAACGCA 313 0.25026585750037983 No Hit GTTGATACCACTGCTTCCCATGTAC 311 0.24866671464095244 No Hit GGTATCAACGCAGAGTACATGGAAG 298 0.2382722860546747 No Hit ACATGGGAAGCAGTGGTATCAACGC 280 0.22388000031982858 No Hit GATACCACTGCTTCCCATGTACTCT 252 0.20149200028784572 No Hit ATACCACTGCTTCCATGTACTCTGC 251 0.20069242885813204 No Hit ATGGGAAGCAGTGGTATCAACGCAG 246 0.19669457170956367 No Hit GTGGTATCAACGCAGAGTACATGGA 227 0.18150271454500388 No Hit CCCCATGTACTCTGCGTTGATACCA 223 0.1783044288261492 No Hit CTTCCCATGTACTCTGCGTTGATAC 199 0.159114714513021 No Hit GGAAGCAGTGGTATCAACGCAGAGT 189 0.15111900021588429 No Hit CCACTGCTTCCATGTACTCTGCGTT 173 0.1383258573404655 No Hit GTACATGGGAGTGGTATCAACGCAA 171 0.13672671448103818 No Hit GCAGAGTACTTTTTTTTTTTTTTTT 164 0.13112971447304245 No Hit ACATGGAAGCAGTGGTATCAACGCA 162 0.12953057161361511 No Hit TGATACCACTGCTTCCCATGTACTC 161 0.12873100018390143 No Hit TGGAAGCAGTGGTATCAACGCAGAG 159 0.12713185732447407 No Hit CCCATGTACTCTGCGTTGATACCAA 151 0.1207352858867647 No Hit GTACATGGGGTGGTATCAACGCAAA 147 0.11753700016791001 No Hit GTTGATACCACTGCTTCCATGTACT 145 0.11593785730848265 No Hit GTACATGGGAAGCAGTGGTATAAAC 132 0.10554342872220489 No Hit CCCATGTACTCTGCGTTGATACAAC 127 0.10154557157363653 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 7.995714297136735E-4 0.0 8 0.0 0.0 0.0 7.995714297136735E-4 0.0 9 0.0 0.0 0.0 7.995714297136735E-4 0.0 10 0.0 0.0 0.0 7.995714297136735E-4 0.0 11 0.0 0.0 0.0 7.995714297136735E-4 0.0 12 0.0 0.0 0.0 7.995714297136735E-4 0.0 13 0.0 0.0 0.0 7.995714297136735E-4 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGGGGTG 40 0.0052447356 14.2494 6 ATACCAA 50 0.001482136 13.304761 19 GATACAA 65 5.3566815E-5 13.158552 18 GGGAGTG 70 1.075941E-4 12.213771 7 ATGGGGT 55 0.003042367 12.0904 5 TGATACA 75 2.0457033E-4 11.39952 17 AAAAGTA 145 1.1623342E-9 11.137462 2 ATACAAC 60 0.0058091013 11.0873 19 AAAAAGT 150 2.0354491E-9 10.766213 1 AAAGTAC 160 5.8917067E-9 10.093325 3 AAGTACT 170 1.4806574E-9 10.0584 4 AGTACTC 170 1.4806574E-9 10.0584 5 TCCATGT 695 0.0 9.704628 1 ATGGAAG 815 0.0 9.557879 5 CCATGTA 1890 0.0 9.499601 2 CATGGGG 80 0.0044681868 9.499599 4 TGGGAGT 80 0.0044681868 9.499599 6 GGGAAGC 1345 0.0 9.464285 7 ACATGGA 865 0.0 9.444689 3 TGGAAGC 795 0.0 9.320362 6 >>END_MODULE