##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062139_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1541864 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.25988024884166 32.0 32.0 32.0 32.0 32.0 2 30.768314844889044 32.0 32.0 32.0 32.0 32.0 3 30.78375070693654 32.0 32.0 32.0 32.0 32.0 4 30.788660348772655 32.0 32.0 32.0 32.0 32.0 5 30.680678710962834 32.0 32.0 32.0 32.0 32.0 6 34.37233698951399 36.0 36.0 36.0 32.0 36.0 7 34.30298716358901 36.0 36.0 36.0 32.0 36.0 8 34.2409375924206 36.0 36.0 36.0 32.0 36.0 9 34.40289805067113 36.0 36.0 36.0 32.0 36.0 10 34.03716605355596 36.0 36.0 36.0 32.0 36.0 11 34.40290194206493 36.0 36.0 36.0 32.0 36.0 12 34.1802817887959 36.0 36.0 36.0 32.0 36.0 13 34.28859808647196 36.0 36.0 36.0 32.0 36.0 14 34.16914656545584 36.0 36.0 36.0 32.0 36.0 15 34.116556324033766 36.0 36.0 36.0 32.0 36.0 16 34.12504345389736 36.0 36.0 36.0 32.0 36.0 17 34.05292295559141 36.0 36.0 36.0 32.0 36.0 18 34.06285508968366 36.0 36.0 36.0 32.0 36.0 19 34.06953336999891 36.0 36.0 36.0 32.0 36.0 20 34.04899264785999 36.0 36.0 36.0 32.0 36.0 21 34.03497260458769 36.0 36.0 36.0 32.0 36.0 22 34.01445004228648 36.0 36.0 36.0 32.0 36.0 23 33.969950008561064 36.0 36.0 36.0 32.0 36.0 24 33.94407094270312 36.0 36.0 36.0 32.0 36.0 25 33.575160973989924 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 3.0 4 16.0 5 116.0 6 325.0 7 78.0 8 253.0 9 200.0 10 89.0 11 39.0 12 78.0 13 77.0 14 195.0 15 310.0 16 513.0 17 640.0 18 982.0 19 1363.0 20 2152.0 21 3036.0 22 4585.0 23 6663.0 24 9625.0 25 13349.0 26 18531.0 27 23644.0 28 31483.0 29 41697.0 30 54827.0 31 74122.0 32 105413.0 33 148883.0 34 322906.0 35 675671.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.018422662111966 17.40155177121525 11.697498655836394 25.88252691083639 2 16.778825574306357 19.350459834226193 37.43854824692255 26.4321663445449 3 19.149982164283166 22.911567273081037 28.264876609268086 29.67357395336771 4 12.849829119092544 15.558302853247385 35.37238027471968 36.21948775294039 5 15.019041749116035 36.394783793427834 33.2925682031985 15.29360625425763 6 34.76027275022276 35.04367910379474 16.564377761784208 13.631670384198294 7 30.706019457817053 30.194480784026023 20.154390019834377 18.94510973832255 8 28.160225116106336 33.23650501271602 18.942424374246436 19.66084549693121 9 27.04676131696595 14.47013256020077 18.53979241001133 39.94331371282194 10 16.36368831762591 26.75149887259843 31.064394372343852 25.820418437431808 11 37.17203665577731 21.285615010423907 21.963720912107966 19.57862742169082 12 24.354226048645977 23.690316848928347 28.75234037247235 23.203116729953326 13 29.41176088601142 19.540305272625144 25.055148431589647 25.992785409773788 14 23.53894512250155 19.738355161959948 24.978329371477102 31.7443703440614 15 25.21544250299054 27.2394006185002 21.986694842498057 25.558462036011203 16 25.72777866879472 25.961340542562223 23.531569812403777 24.779310976239284 17 24.042591737623674 26.08445231448744 25.08972303552493 24.783232912363953 18 24.70758117118164 25.3862071159631 25.88972263469446 24.016489078160802 19 25.658314149680532 25.067288853226554 25.168433120787547 24.105963876305363 20 25.714476751470173 24.682254620851005 24.723216331713257 24.880052295965562 21 26.570838583364655 24.416232220488983 24.424930881349617 24.587998314796746 22 25.89659540128248 24.381435033068254 24.971385425816674 24.75058413983259 23 24.66972562220363 24.495054890488397 25.31005515337077 25.525164333937205 24 24.70914796354888 25.128499409921883 25.29390304542628 24.868449581102958 25 24.799467713928696 24.693270151409422 25.22003862319664 25.287223511465246 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 594.0 1 594.0 2 568.0 3 542.0 4 542.0 5 542.0 6 1098.5 7 1655.0 8 1655.0 9 1655.0 10 2024.5 11 2394.0 12 2394.0 13 2394.0 14 3409.5 15 4425.0 16 4425.0 17 4425.0 18 7276.5 19 10128.0 20 10128.0 21 10128.0 22 15945.5 23 21763.0 24 21763.0 25 21763.0 26 32249.0 27 42735.0 28 42735.0 29 42735.0 30 53809.0 31 64883.0 32 64883.0 33 64883.0 34 79584.5 35 94286.0 36 94286.0 37 94286.0 38 109331.0 39 124376.0 40 124376.0 41 124376.0 42 143255.5 43 162135.0 44 162135.0 45 162135.0 46 179130.5 47 196126.0 48 196126.0 49 196126.0 50 202696.5 51 209267.0 52 209267.0 53 209267.0 54 196701.5 55 184136.0 56 184136.0 57 184136.0 58 169370.5 59 154605.0 60 154605.0 61 154605.0 62 135902.5 63 117200.0 64 117200.0 65 117200.0 66 95589.0 67 73978.0 68 73978.0 69 73978.0 70 55931.5 71 37885.0 72 37885.0 73 37885.0 74 28689.0 75 19493.0 76 19493.0 77 19493.0 78 15394.0 79 11295.0 80 11295.0 81 11295.0 82 7825.5 83 4356.0 84 4356.0 85 4356.0 86 3225.0 87 2094.0 88 2094.0 89 2094.0 90 1408.5 91 723.0 92 723.0 93 723.0 94 450.5 95 178.0 96 178.0 97 178.0 98 395.0 99 612.0 100 612.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 8.431353219220372E-4 2 2.594262528990884E-4 3 9.079918851468093E-4 4 0.009533914794041498 5 0.033336273497532855 6 0.06271629663835461 7 0.1043542102286583 8 0.1090238827808419 9 0.11732552287361273 10 0.13230738897853508 11 0.13840390592166366 12 0.13263167179465893 13 0.12510831046058538 14 0.11421240783882367 15 0.1303616920817919 16 0.11680667036781454 17 0.11979007227615406 18 0.10980216153953916 19 0.09663627920491041 20 0.0908640450779057 21 0.09060461882500662 22 0.10150052144676833 23 0.08113556059418989 24 0.09015062288243321 25 0.08684293815796984 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1541864.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.32659747447208 #Duplication Level Percentage of deduplicated Percentage of total 1 73.88158299534614 38.659718541742784 2 15.050958889486314 15.751309348299552 3 5.107951531434719 8.018451711134933 4 2.1076868945932294 4.411523349423999 5 1.1168906489737707 2.922154370592619 6 0.6350399156314778 1.9937686827282628 7 0.41620026521836584 1.5244840622794964 8 0.2838155667989202 1.1880882336700993 9 0.2046601286293191 0.9638251352874052 >10 1.0349122746016852 9.63631984859092 >50 0.07843651605295043 2.8673275489153958 >100 0.07228462894281948 7.8176169354395695 >500 0.007091499020148897 2.513733496544559 >1k 0.0024882452702276827 1.7316787353504073 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 2632 0.17070247440760014 No Hit TATCAACGCAGAGTACTTTTTTTTT 1646 0.10675390306797486 No Hit GCGCAAGACGGACCAGAGCGAAAGC 1543 0.10007367705582335 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.945696896743163E-4 2 0.0 0.0 0.0 0.0 1.945696896743163E-4 3 0.0 0.0 0.0 0.0 1.945696896743163E-4 4 0.0 0.0 0.0 0.0 1.945696896743163E-4 5 0.0 0.0 0.0 0.0 1.945696896743163E-4 6 0.0 0.0 0.0 0.0 3.2428281612386045E-4 7 0.0 0.0 0.0 0.0 3.2428281612386045E-4 8 0.0 0.0 0.0 0.0 3.2428281612386045E-4 9 0.0 0.0 0.0 0.0 3.2428281612386045E-4 10 0.0 0.0 0.0 0.0 3.2428281612386045E-4 11 0.0 0.0 0.0 0.0 3.2428281612386045E-4 12 0.0 0.0 0.0 0.0 0.0010377050115963535 13 0.0 0.0 0.0 0.0 0.001361987827720214 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTGCGTA 45 6.7524693E-4 14.780607 9 CGTCTTA 65 5.449279E-5 13.1546545 15 GTATTAC 65 5.4742377E-5 13.14825 1 GGTATCA 790 0.0 12.981817 1 CGGTCCA 290 0.0 12.777894 10 TCCAACG 100 1.4454963E-7 12.347954 18 GAATATA 70 1.09522996E-4 12.209089 1 TAACGAA 110 3.8082362E-8 12.092046 13 CGAACGA 110 3.8135113E-8 12.090868 16 CGCGGTC 95 1.0377462E-6 12.001907 10 GTATCAA 1965 0.0 11.88807 1 GCTAGAC 80 2.8692797E-5 11.873802 3 TCGCACG 145 9.640644E-11 11.794212 13 CGCATCG 195 0.0 11.693406 13 ACGGTAT 230 0.0 11.567431 9 CAAGACG 345 0.0 11.564803 4 GTGTAGG 165 7.2759576E-12 11.510252 1 GCCGGTC 315 0.0 11.461394 8 AACCGCG 100 1.9271683E-6 11.4010725 7 GCGTTAT 125 1.8428182E-8 11.39515 1 >>END_MODULE