##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062138_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1448818 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.275303730351226 32.0 32.0 32.0 32.0 32.0 2 31.425423345099247 32.0 32.0 32.0 32.0 32.0 3 31.555450719137944 32.0 32.0 32.0 32.0 32.0 4 31.63447237679267 32.0 32.0 32.0 32.0 32.0 5 31.610668834870907 32.0 32.0 32.0 32.0 32.0 6 35.2478496263851 36.0 36.0 36.0 36.0 36.0 7 35.249125148914494 36.0 36.0 36.0 36.0 36.0 8 35.200381276323185 36.0 36.0 36.0 36.0 36.0 9 35.28663572650257 36.0 36.0 36.0 36.0 36.0 10 35.15657246113729 36.0 36.0 36.0 36.0 36.0 11 35.2816040386025 36.0 36.0 36.0 36.0 36.0 12 35.20446046363311 36.0 36.0 36.0 36.0 36.0 13 35.23070875706956 36.0 36.0 36.0 36.0 36.0 14 35.20400146878352 36.0 36.0 36.0 36.0 36.0 15 35.18463050569499 36.0 36.0 36.0 36.0 36.0 16 35.191001906381615 36.0 36.0 36.0 36.0 36.0 17 35.16829443035633 36.0 36.0 36.0 36.0 36.0 18 35.16556806997152 36.0 36.0 36.0 36.0 36.0 19 35.158282820892616 36.0 36.0 36.0 36.0 36.0 20 35.15370943762433 36.0 36.0 36.0 36.0 36.0 21 35.150227978945594 36.0 36.0 36.0 36.0 36.0 22 35.13562296989684 36.0 36.0 36.0 36.0 36.0 23 35.10154829661145 36.0 36.0 36.0 36.0 36.0 24 35.085112139689045 36.0 36.0 36.0 36.0 36.0 25 35.07034078814592 36.0 36.0 36.0 36.0 36.0 26 35.027996615171816 36.0 36.0 36.0 36.0 36.0 27 35.01068457183718 36.0 36.0 36.0 36.0 36.0 28 34.99332490347304 36.0 36.0 36.0 36.0 36.0 29 34.97911884032363 36.0 36.0 36.0 36.0 36.0 30 34.950599040045056 36.0 36.0 36.0 36.0 36.0 31 34.961407851089646 36.0 36.0 36.0 36.0 36.0 32 34.93889777736058 36.0 36.0 36.0 32.0 36.0 33 34.91523987139862 36.0 36.0 36.0 32.0 36.0 34 34.905567158884 36.0 36.0 36.0 32.0 36.0 35 34.895561761380655 36.0 36.0 36.0 32.0 36.0 36 34.86861841860054 36.0 36.0 36.0 32.0 36.0 37 34.85946613032141 36.0 36.0 36.0 32.0 36.0 38 34.839738324620484 36.0 36.0 36.0 32.0 36.0 39 34.825866326895444 36.0 36.0 36.0 32.0 36.0 40 34.8109921328973 36.0 36.0 36.0 32.0 36.0 41 34.79138994683942 36.0 36.0 36.0 32.0 36.0 42 34.759573666257594 36.0 36.0 36.0 32.0 36.0 43 34.75629927292455 36.0 36.0 36.0 32.0 36.0 44 34.70863352056642 36.0 36.0 36.0 32.0 36.0 45 34.697982769402365 36.0 36.0 36.0 32.0 36.0 46 34.68479684818935 36.0 36.0 36.0 32.0 36.0 47 34.65748009756919 36.0 36.0 36.0 32.0 36.0 48 34.63882765123017 36.0 36.0 36.0 32.0 36.0 49 34.625130968831144 36.0 36.0 36.0 32.0 36.0 50 34.21016028238191 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 15.0 21 35.0 22 95.0 23 294.0 24 676.0 25 1684.0 26 3513.0 27 6371.0 28 11340.0 29 18245.0 30 27302.0 31 40579.0 32 62451.0 33 105174.0 34 240851.0 35 930191.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.676025366183715 17.812667212101754 12.359144840632842 26.15216258108169 2 16.308838978921024 19.65739931609631 36.81449146915048 27.219270235832195 3 18.597129378146967 22.885530588791532 28.40645631084714 30.11088372221436 4 12.965741728774766 15.742142905458104 34.76889436768455 36.52322099808257 5 15.169469181084166 36.08935007709733 32.731854518648994 16.009326223169506 6 35.572860083185056 34.32025278537401 16.1424692404429 13.96441789099804 7 31.320773209609488 29.834527180087495 19.730221463289386 19.11447814701363 8 28.509792120197293 32.80315401934543 18.7123572456996 19.974696614757686 9 27.1395026842571 14.493262783869335 18.474991337766372 39.892243194107195 10 16.938578164115963 26.332311120037932 30.328813093717148 26.40029762212895 11 37.35610684019663 21.204595746325623 21.63425633861534 19.805041074862405 12 24.864492893167323 23.29417724943868 28.002018198295573 23.83931165909842 13 29.455252488580346 19.25894073651763 25.01570245538087 26.270104319521153 14 23.811686492023153 19.26715432856301 24.668798979581975 32.25236019983186 15 25.431351625946114 26.879014479389408 21.742068361933658 25.94756553273082 16 26.17368413060614 25.746023989276743 23.0986862357763 24.98160564434082 17 24.517089102979117 25.967167718788698 24.59480762939168 24.920935548840504 18 25.1744009077751 24.972995209194814 25.389403906773595 24.46319997625649 19 25.87875081618257 24.803322432493246 24.973599168425572 24.34432758289861 20 26.13035636759195 24.14866514864237 24.523799827859083 25.197178655906594 21 26.85052701617941 24.04375431817821 24.280913324457128 24.824805341185257 22 26.35203317462925 23.869664788814056 24.740650654533557 25.037651382023142 23 24.817558049084184 24.08834242005719 25.218505856847344 25.875593674011277 24 25.091092565507616 24.56472628055889 25.008610568325118 25.335570585608373 25 25.24342340937029 24.234459519620543 24.95946681869917 25.562650252309993 26 25.035770612535075 25.018239043632214 25.13267739497451 24.813312948858204 27 25.49776955342063 24.5557570231631 24.702911970005793 25.24356145341048 28 25.18749974116546 24.396708452914893 25.137665464293946 25.2781263416257 29 25.06191279475874 24.76076951322877 25.01028428809259 25.167033403919902 30 24.989577581446714 24.817020982882383 25.15302319160685 25.040378244064055 31 25.59065716001408 24.485129174978084 24.452826802686342 25.471386862321495 32 25.442588281254853 24.454188860213954 24.48373040715568 25.619492451375507 33 25.005193899842286 24.345206254766826 24.93575784347898 25.713842001911907 34 25.54500125620857 24.36892775006143 25.042172716254235 25.04389827747577 35 25.916319083277138 24.29961630659029 25.090608656879805 24.693455953252766 36 24.894189170161486 24.76960433789891 24.84766829650776 25.488538195431843 37 25.83847381924126 24.53373256220868 24.71961142827167 24.908182190278392 38 25.078374233340554 24.38049499661103 25.018739413784203 25.52239135626421 39 25.704906581888988 24.285119708671054 24.584261969659217 25.425711739780745 40 25.823016863425032 24.47060220207397 24.809637662753588 24.89674327174741 41 25.033631397126577 24.986557794581014 25.050334933513714 24.929475874778696 42 25.974760153816312 24.739204592125162 24.66866058184313 24.61737467221539 43 25.54365795088321 24.084470002091457 24.906626466521853 25.46524558050348 44 25.151803593035915 24.625417688526706 24.688989865035097 25.533788853402285 45 25.31664354392286 24.783232904699783 24.675694890218736 25.224428661158623 46 25.201307028938793 24.542960914754598 24.781506120313477 25.474225935993132 47 25.228585568342375 24.583983583666768 25.056029088881083 25.13140175910977 48 25.859925632903746 25.029559781854676 24.12264565742128 24.98786892782029 49 25.23951384900826 25.088834099041392 24.278835534744005 25.392816517206345 50 25.456207024601152 25.127864969070828 24.290271770865974 25.125656235462046 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 131.0 1 80.5 2 30.0 3 90.0 4 150.0 5 175.5 6 201.0 7 161.5 8 122.0 9 165.0 10 208.0 11 356.5 12 505.0 13 934.5 14 1364.0 15 1825.0 16 2286.0 17 2202.5 18 2119.0 19 2196.5 20 2274.0 21 2701.5 22 3129.0 23 3888.5 24 4648.0 25 5944.5 26 7241.0 27 9309.0 28 11377.0 29 13260.0 30 15143.0 31 17772.0 32 20401.0 33 23574.5 34 26748.0 35 31382.0 36 36016.0 37 42335.5 38 48655.0 39 54183.5 40 59712.0 41 65651.5 42 71591.0 43 75484.5 44 79378.0 45 86651.5 46 93925.0 47 100474.5 48 107024.0 49 111029.5 50 115035.0 51 112664.5 52 110294.0 53 109921.5 54 109549.0 55 109652.5 56 109756.0 57 106063.5 58 102371.0 59 94300.0 60 86229.0 61 75680.5 62 65132.0 63 56419.0 64 47706.0 65 40661.5 66 33617.0 67 29146.0 68 24675.0 69 21791.5 70 18908.0 71 14931.0 72 10954.0 73 9534.5 74 8115.0 75 6119.5 76 4124.0 77 3610.5 78 3097.0 79 2652.0 80 2207.0 81 1701.5 82 1196.0 83 1004.0 84 812.0 85 604.0 86 396.0 87 274.5 88 153.0 89 101.0 90 49.0 91 32.0 92 15.0 93 13.5 94 12.0 95 14.0 96 16.0 97 16.0 98 16.0 99 11.0 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.029886431560071723 2 0.005245655423938687 3 2.0706534568179028E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 6.902178189393008E-5 11 0.0 12 6.902178189393008E-5 13 0.0 14 0.0 15 0.0 16 2.7608712757572033E-4 17 0.0 18 6.902178189393008E-5 19 0.0 20 3.4510890946965047E-4 21 6.902178189393008E-5 22 0.0 23 6.902178189393008E-5 24 0.0011733702921968116 25 3.4510890946965047E-4 26 2.0706534568179028E-4 27 3.4510890946965047E-4 28 0.0011043485103028813 29 4.1413069136358056E-4 30 0.0012423920740907417 31 5.521742551514407E-4 32 7.592396008332309E-4 33 2.0706534568179028E-4 34 9.663049465150213E-4 35 3.4510890946965047E-4 36 4.1413069136358056E-4 37 0.001725544547348252 38 0.0 39 6.211960370453709E-4 40 1.3804356378786017E-4 41 0.001587500983560392 42 0.005314677205832617 43 0.004624459386893315 44 0.0049005465144690355 45 0.0019326098930300426 46 0.0024847841481814834 47 0.0011733702921968116 48 0.0040722851317418745 49 0.003451089094696504 50 0.0016565227654543222 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1448818.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.01369498882018 #Duplication Level Percentage of deduplicated Percentage of total 1 78.64891705368092 46.41363202206943 2 13.16223224650573 15.53503918334605 3 3.6506940382625244 6.463228334145866 4 1.53336315600797 3.619577023829961 5 0.7977143169526693 2.353803469442992 6 0.47703390609530544 1.6890920060180306 7 0.3266165349628234 1.3492394000820966 8 0.23490199198306336 1.1089947605723827 9 0.1608954685482336 0.8545532495389893 >10 0.892150273710462 9.173730601018846 >50 0.059554606194941184 2.4584732667617857 >100 0.049568529179548126 6.066985731868304 >500 0.005298231596559764 2.144695567175543 >1k 0.0010596463193119528 0.7689553841297092 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.3804356378786017E-4 2 0.0 0.0 0.0 0.0 1.3804356378786017E-4 3 0.0 0.0 0.0 0.0 1.3804356378786017E-4 4 0.0 0.0 0.0 0.0 1.3804356378786017E-4 5 0.0 0.0 0.0 0.0 1.3804356378786017E-4 6 0.0 0.0 0.0 0.0 2.0706534568179025E-4 7 0.0 0.0 0.0 0.0 2.0706534568179025E-4 8 0.0 0.0 0.0 0.0 2.0706534568179025E-4 9 0.0 0.0 0.0 0.0 2.0706534568179025E-4 10 0.0 0.0 0.0 0.0 2.7608712757572033E-4 11 0.0 0.0 0.0 0.0 2.7608712757572033E-4 12 0.0 0.0 0.0 1.3804356378786017E-4 2.7608712757572033E-4 13 0.0 0.0 0.0 1.3804356378786017E-4 2.7608712757572033E-4 14 0.0 0.0 0.0 2.0706534568179025E-4 2.7608712757572033E-4 15 0.0 0.0 0.0 2.0706534568179025E-4 3.451089094696504E-4 16 6.902178189393008E-5 0.0 0.0 5.521742551514407E-4 3.451089094696504E-4 17 6.902178189393008E-5 0.0 0.0 6.902178189393008E-4 3.451089094696504E-4 18 6.902178189393008E-5 0.0 0.0 9.663049465150212E-4 3.451089094696504E-4 19 6.902178189393008E-5 0.0 0.0 0.0010353267284089513 3.451089094696504E-4 20 6.902178189393008E-5 6.902178189393008E-5 0.0 0.0013804356378786017 4.141306913635805E-4 21 2.0706534568179025E-4 6.902178189393008E-5 0.0 0.001587500983560392 4.141306913635805E-4 22 2.0706534568179025E-4 6.902178189393008E-5 0.0 0.001656522765454322 4.141306913635805E-4 23 2.0706534568179025E-4 6.902178189393008E-5 0.0 0.0018635881111361123 4.141306913635805E-4 24 2.0706534568179025E-4 6.902178189393008E-5 0.0 0.0021396752387118326 4.141306913635805E-4 25 2.0706534568179025E-4 6.902178189393008E-5 0.0 0.0027608712757572033 4.141306913635805E-4 26 2.0706534568179025E-4 6.902178189393008E-5 0.0 0.003244023749014714 4.831524732575106E-4 27 2.0706534568179025E-4 6.902178189393008E-5 0.0 0.004279350477423665 4.831524732575106E-4 28 2.0706534568179025E-4 6.902178189393008E-5 0.0 0.004831524732575106 4.831524732575106E-4 29 2.0706534568179025E-4 6.902178189393008E-5 0.0 0.0058668514609840575 4.831524732575106E-4 30 2.0706534568179025E-4 6.902178189393008E-5 0.0 0.00807554848158982 4.831524732575106E-4 31 2.0706534568179025E-4 6.902178189393008E-5 0.0 0.013183160341740647 4.831524732575106E-4 32 2.0706534568179025E-4 6.902178189393008E-5 0.0 0.019119033584618635 5.521742551514407E-4 33 2.0706534568179025E-4 6.902178189393008E-5 0.0 0.02436468900855732 5.521742551514407E-4 34 2.0706534568179025E-4 6.902178189393008E-5 0.0 0.03023154046954138 6.902178189393008E-4 35 2.0706534568179025E-4 6.902178189393008E-5 0.0 0.037064696877040455 6.902178189393008E-4 36 2.0706534568179025E-4 6.902178189393008E-5 0.0 0.046865789905978526 6.902178189393008E-4 37 2.0706534568179025E-4 6.902178189393008E-5 0.0 0.06218862548643101 6.902178189393008E-4 38 2.0706534568179025E-4 6.902178189393008E-5 0.0 0.08365439965544326 8.28261382727161E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1670 0.0 27.670053 1 AGCGCGA 40 7.0304883E-4 27.501554 38 GGTATCA 780 0.0 25.953768 1 TTTATAC 195 1.8189894E-12 18.050432 3 TATCAAC 2510 0.0 17.792606 2 TCAACGC 2515 0.0 17.75662 4 ATCAACG 2535 0.0 17.616528 3 GTATAGA 175 1.9099389E-10 17.603426 1 TATACTG 225 0.0 17.59917 5 CAACGCA 2550 0.0 17.42663 5 AACGCAG 2580 0.0 17.309263 6 GTATAGC 235 0.0 16.854343 1 ATACCGT 500 0.0 16.719213 6 ACCGTCG 540 0.0 16.702919 8 CGTCGTA 505 0.0 16.553675 10 CGGATCG 80 0.001987856 16.500933 26 GGACCGT 120 6.4111664E-6 16.499224 6 TACCGTC 560 0.0 16.499224 7 AACCGCG 270 0.0 16.29778 41 TAACGCC 340 0.0 16.175709 4 >>END_MODULE