##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062137_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1261199 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.201354425431674 32.0 32.0 32.0 32.0 32.0 2 31.406824775471595 32.0 32.0 32.0 32.0 32.0 3 31.537349775887865 32.0 32.0 32.0 32.0 32.0 4 31.596126384496024 32.0 32.0 32.0 32.0 32.0 5 31.595668090444093 32.0 32.0 32.0 32.0 32.0 6 35.1792564060073 36.0 36.0 36.0 36.0 36.0 7 35.195276875417754 36.0 36.0 36.0 36.0 36.0 8 35.13671038432476 36.0 36.0 36.0 36.0 36.0 9 35.266654191765134 36.0 36.0 36.0 36.0 36.0 10 35.123804411516346 36.0 36.0 36.0 36.0 36.0 11 35.245258678448046 36.0 36.0 36.0 36.0 36.0 12 35.182283684018145 36.0 36.0 36.0 36.0 36.0 13 35.203660167824424 36.0 36.0 36.0 36.0 36.0 14 35.15275939800143 36.0 36.0 36.0 36.0 36.0 15 35.12346822349209 36.0 36.0 36.0 36.0 36.0 16 35.16057973404673 36.0 36.0 36.0 36.0 36.0 17 35.152461268998785 36.0 36.0 36.0 36.0 36.0 18 35.12667945344074 36.0 36.0 36.0 36.0 36.0 19 35.135338673754106 36.0 36.0 36.0 36.0 36.0 20 35.126964896102834 36.0 36.0 36.0 36.0 36.0 21 35.12820498589041 36.0 36.0 36.0 36.0 36.0 22 35.09654463728563 36.0 36.0 36.0 36.0 36.0 23 35.04776565791759 36.0 36.0 36.0 36.0 36.0 24 35.052140859610574 36.0 36.0 36.0 36.0 36.0 25 35.04070808809712 36.0 36.0 36.0 36.0 36.0 26 34.99788455271531 36.0 36.0 36.0 36.0 36.0 27 34.97737787613216 36.0 36.0 36.0 36.0 36.0 28 34.9623881718904 36.0 36.0 36.0 36.0 36.0 29 34.91907304081275 36.0 36.0 36.0 32.0 36.0 30 34.92073970880091 36.0 36.0 36.0 32.0 36.0 31 34.899551141413845 36.0 36.0 36.0 32.0 36.0 32 34.846087730802196 36.0 36.0 36.0 32.0 36.0 33 34.821346195168246 36.0 36.0 36.0 32.0 36.0 34 34.80494196395652 36.0 36.0 36.0 32.0 36.0 35 34.78733808066768 36.0 36.0 36.0 32.0 36.0 36 34.75933456972294 36.0 36.0 36.0 32.0 36.0 37 34.763387062628496 36.0 36.0 36.0 32.0 36.0 38 34.762414178888505 36.0 36.0 36.0 32.0 36.0 39 34.739399571360266 36.0 36.0 36.0 32.0 36.0 40 34.75454230458477 36.0 36.0 36.0 32.0 36.0 41 34.74607179358689 36.0 36.0 36.0 32.0 36.0 42 34.7294431727269 36.0 36.0 36.0 32.0 36.0 43 34.71663393326509 36.0 36.0 36.0 32.0 36.0 44 34.68249181929259 36.0 36.0 36.0 32.0 36.0 45 34.67302860214764 36.0 36.0 36.0 32.0 36.0 46 34.638816713302184 36.0 36.0 36.0 32.0 36.0 47 34.62321092864806 36.0 36.0 36.0 32.0 36.0 48 34.58766221666843 36.0 36.0 36.0 32.0 36.0 49 34.57606293693541 36.0 36.0 36.0 32.0 36.0 50 34.1303251905528 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 6.0 20 14.0 21 31.0 22 75.0 23 277.0 24 669.0 25 1561.0 26 3477.0 27 6560.0 28 10891.0 29 17124.0 30 25633.0 31 37456.0 32 56095.0 33 94382.0 34 212205.0 35 794742.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.001297556928726 17.239106589225678 11.628997066220611 27.130598787624987 2 16.542666183510143 18.77071024801947 36.75166574026425 27.934957828206137 3 19.381444279874025 21.680135363575527 27.780456011595344 31.157964344955108 4 13.402981453333618 15.33336980662022 33.57437418579334 37.689274554252826 5 15.107925077644369 35.81417365538666 33.09493585072617 15.982965416242797 6 36.663214916634686 33.4085265097574 15.674248887563868 14.254009686044041 7 31.971084658329097 29.200863622632113 19.026973538672326 19.80107818036646 8 28.619512067484987 33.64211357604946 18.009211869023048 19.729162487442505 9 27.052986879945195 14.46631340494244 17.841355725781575 40.63934398933079 10 16.985437655308683 26.48584916880617 30.984746249201155 25.543966926683993 11 37.579795099742384 20.603568509014043 21.237806246278343 20.578830144965227 12 24.714180712163582 22.82700826752955 28.21489709395583 24.243913926351034 13 30.77539706263643 19.125054808955603 24.00771012346188 26.091838004946087 14 23.40415747237351 18.65930753195967 24.46552843762166 33.47100655804516 15 25.592392635896477 26.7217148126505 21.10634404245484 26.579548508998187 16 26.1416805887143 25.278288979685044 23.08226602039821 25.497764411202446 17 24.73043508597771 25.543312355940657 24.472268056032394 25.253984502049242 18 25.38181950811847 24.91361388140482 24.93977947951075 24.764787130965953 19 26.386954001707895 24.42398067236019 24.490980408325726 24.698084917606185 20 26.187523588720545 24.273150247859967 24.61710947386449 24.922216689554993 21 26.180087361312527 23.843659882381765 24.315433171133183 25.660819585172522 22 26.282212402642248 24.183257360654427 24.07835718233205 25.456173054371277 23 25.540775087833083 24.341440169235785 24.541884349733863 25.575900393197266 24 25.575944604654815 24.226345139388307 24.353130260412993 25.84457999554389 25 25.70720626072891 24.114034705180405 24.59143907167409 25.5873199624166 26 25.460356677312646 24.535916701289885 24.559386487112235 25.44434013428523 27 25.60607298010693 24.535975064879047 24.323319269929343 25.53463268508468 28 25.682791474353838 24.269198046595932 24.273083287675142 25.77492719137508 29 25.5244430877065 24.726231867395605 24.3121008250112 25.437224219886694 30 25.55346669447116 24.393210523102443 24.539263408201954 25.51405937422444 31 25.8070936066832 24.2725929121022 24.336579997335853 25.583733483878746 32 25.36051297624702 24.509332066803626 24.41521453168399 25.714940425265365 33 25.4334774293607 24.505310831940474 24.45757836212611 25.603633376572716 34 25.576501464892143 24.353445370821884 24.648247481535222 25.421805682750747 35 25.434725899284565 24.480949447231477 24.687974995183147 25.396349658300803 36 25.41038524635008 24.301593808402046 24.639924262186675 25.648096683061194 37 25.65115864174282 24.184510476341504 24.22930996887823 25.935020913037445 38 25.696737786820318 24.48400292102991 24.35222355869296 25.467035733456818 39 25.748897071649907 24.303117378217998 24.189970091691325 25.75801545844077 40 26.057250419443136 24.19703202357128 24.379240022962332 25.366477534023264 41 25.821491267715523 24.327337370815634 24.420266067863324 25.43090529360552 42 25.4556988121858 24.441537022059407 24.46104318315175 25.64172098260304 43 25.492347863182125 24.422927944393653 24.464953046859574 25.619771145564645 44 25.354003422284176 24.443165184681234 24.66423395863762 25.53859743439697 45 25.608479704656606 24.29898761156254 24.230717996536566 25.86181468724429 46 25.712314755346227 24.140441019053736 24.473306532822697 25.673937692777343 47 25.697100117428874 24.397849965389803 24.51321728939913 25.391832627782197 48 25.6908668633681 24.573062476360544 24.104436248991977 25.63163441127938 49 25.85461275210997 24.27130347078395 24.296280555300058 25.57780322180603 50 25.610720161753918 24.853806965726406 24.005391797331853 25.530081075187823 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 11.0 1 12.0 2 13.0 3 42.5 4 72.0 5 79.0 6 86.0 7 92.5 8 99.0 9 123.0 10 147.0 11 234.5 12 322.0 13 658.0 14 994.0 15 1267.0 16 1540.0 17 1709.5 18 1879.0 19 1931.0 20 1983.0 21 2312.5 22 2642.0 23 3419.5 24 4197.0 25 5254.5 26 6312.0 27 7825.0 28 9338.0 29 10773.5 30 12209.0 31 15067.5 32 17926.0 33 21273.0 34 24620.0 35 29097.0 36 33574.0 37 38028.0 38 42482.0 39 45466.0 40 48450.0 41 52223.5 42 55997.0 43 59602.0 44 63207.0 45 68290.5 46 73374.0 47 77624.0 48 81874.0 49 86850.0 50 91826.0 51 93682.0 52 95538.0 53 96707.5 54 97877.0 55 97225.0 56 96573.0 57 93988.0 58 91403.0 59 86403.0 60 81403.0 61 72980.5 62 64558.0 63 57055.5 64 49553.0 65 42436.5 66 35320.0 67 29971.5 68 24623.0 69 20774.5 70 16926.0 71 13723.5 72 10521.0 73 9163.5 74 7806.0 75 6304.5 76 4803.0 77 4040.0 78 3277.0 79 2826.5 80 2376.0 81 1910.5 82 1445.0 83 1214.0 84 983.0 85 771.5 86 560.0 87 415.0 88 270.0 89 181.5 90 93.0 91 73.5 92 54.0 93 36.5 94 19.0 95 19.5 96 20.0 97 19.5 98 19.0 99 12.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.02917858323706251 2 0.0038059021613559793 3 2.378688850847487E-4 4 1.585792567231658E-4 5 0.0 6 2.378688850847487E-4 7 0.0 8 0.0 9 0.0 10 7.92896283615829E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 7.92896283615829E-4 17 0.0 18 7.92896283615829E-5 19 0.0 20 2.378688850847487E-4 21 0.0 22 0.0 23 0.0 24 7.92896283615829E-4 25 3.171585134463316E-4 26 2.378688850847487E-4 27 4.757377701694974E-4 28 0.0012686340537853265 29 3.171585134463316E-4 30 9.514755403389948E-4 31 5.550273985310804E-4 32 7.92896283615829E-4 33 2.378688850847487E-4 34 0.0011100547970621607 35 1.585792567231658E-4 36 4.757377701694974E-4 37 0.0019029510806779896 38 0.0 39 8.721859119774119E-4 40 2.378688850847487E-4 41 0.0013479236821469095 42 0.004678088073333392 43 0.0038059021613559793 44 0.004202350303163894 45 0.0018236614523164068 46 0.0022993992224859044 47 7.92896283615829E-4 48 0.005233115471864472 49 0.0034094540195480647 50 0.0019029510806779896 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1261199.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.84545547767471 #Duplication Level Percentage of deduplicated Percentage of total 1 61.75972716829029 27.696430950388994 2 17.04000255670557 15.283333519924055 3 7.8605653238544 10.575318967807986 4 4.300503014655356 7.714320659013306 5 2.5346872961839377 5.6834603145422244 6 1.6914834972938397 4.551320872146744 7 1.103256216190669 3.4633219266552553 8 0.7763984385164019 2.7854353285938775 9 0.5652888160792919 2.28155709901602 >10 2.2815683052281206 16.659065388590808 >50 0.06895727824268756 2.069300705756495 >100 0.017562088759346093 1.2371342675641726 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.3786888508474873E-4 2 0.0 0.0 0.0 0.0 2.3786888508474873E-4 3 0.0 0.0 0.0 0.0 2.3786888508474873E-4 4 0.0 0.0 0.0 0.0 2.3786888508474873E-4 5 0.0 0.0 0.0 0.0 2.3786888508474873E-4 6 7.92896283615829E-4 0.0 0.0 0.0 3.171585134463316E-4 7 7.92896283615829E-4 0.0 0.0 0.0 3.171585134463316E-4 8 7.92896283615829E-4 0.0 0.0 0.0 3.171585134463316E-4 9 7.92896283615829E-4 0.0 0.0 0.0 3.171585134463316E-4 10 7.92896283615829E-4 0.0 0.0 0.0 3.171585134463316E-4 11 7.92896283615829E-4 0.0 0.0 0.0 3.171585134463316E-4 12 7.92896283615829E-4 0.0 0.0 0.0 0.0010307651687005777 13 7.92896283615829E-4 0.0 0.0 0.0 0.0012686340537853265 14 9.514755403389949E-4 0.0 0.0 0.0 0.0012686340537853265 15 9.514755403389949E-4 0.0 0.0 7.92896283615829E-5 0.001585792567231658 16 0.001665082195593241 0.0 0.0 1.585792567231658E-4 0.0017443718239548238 17 0.001665082195593241 0.0 0.0 1.585792567231658E-4 0.0017443718239548238 18 0.001665082195593241 0.0 0.0 3.171585134463316E-4 0.001982240709039573 19 0.001665082195593241 0.0 0.0 3.964481418079145E-4 0.0020615303374011554 20 0.001665082195593241 0.0 0.0 3.964481418079145E-4 0.002537268107570653 21 0.0017443718239548238 0.0 0.0 3.964481418079145E-4 0.002616557735932236 22 0.0017443718239548238 0.0 0.0 6.343170268926632E-4 0.002616557735932236 23 0.0018236614523164068 0.0 0.0 7.92896283615829E-4 0.002616557735932236 24 0.0018236614523164068 0.0 0.0 0.0012686340537853265 0.002616557735932236 25 0.001982240709039573 0.0 0.0 0.0014272133105084923 0.002616557735932236 26 0.001982240709039573 0.0 0.0 0.0021408199657627384 0.002695847364293819 27 0.001982240709039573 0.0 0.0 0.002616557735932236 0.0027751369926554015 28 0.001982240709039573 0.0 0.0 0.003409454019548065 0.0027751369926554015 29 0.001982240709039573 0.0 0.0 0.005312405100226055 0.0027751369926554015 30 0.001982240709039573 0.0 0.0 0.007611804322711959 0.0027751369926554015 31 0.001982240709039573 0.0 0.0 0.012686340537853264 0.0027751369926554015 32 0.001982240709039573 0.0 0.0 0.019505248576949394 0.0028544266210169845 33 0.0020615303374011554 0.0 0.0 0.026244866987683944 0.0028544266210169845 34 0.0020615303374011554 0.0 0.0 0.032905195770056905 0.003171585134463316 35 0.0020615303374011554 0.0 0.0 0.04289568894361635 0.003171585134463316 36 0.0020615303374011554 0.0 0.0 0.05431339542768429 0.003171585134463316 37 0.0020615303374011554 0.0 0.0 0.07262929957920994 0.003171585134463316 38 0.0020615303374011554 0.0 0.0 0.09792269102655489 0.003171585134463316 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 625 0.0 24.297897 1 TATACTG 185 0.0 23.783098 5 GTATCAA 1085 0.0 23.530321 1 TAGGACG 365 0.0 23.50617 4 GTCTACG 75 2.0570878E-6 23.476229 1 TCCGCTA 65 4.9319665E-4 20.307913 38 TGTAGGA 575 0.0 19.513254 2 AGGACGT 470 0.0 18.254793 5 GTCCTAC 555 0.0 18.241663 1 TTAGGAC 290 0.0 17.447773 3 TCCTATA 115 4.2727406E-6 17.217577 2 GTACCGT 90 2.2159542E-4 17.110619 6 CTACAGT 540 0.0 17.110617 4 GTAGGAC 505 0.0 16.553978 3 ATCAACG 1580 0.0 16.29067 3 TATCAAC 1570 0.0 16.254951 2 TCAACGC 1570 0.0 16.254309 4 ACAATAC 150 1.8383616E-7 16.132868 3 CAACGCA 1605 0.0 16.03692 5 CTGTAGG 620 0.0 15.974248 1 >>END_MODULE