##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062136_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 203709 Sequences flagged as poor quality 0 Sequence length 25 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.068308223986175 32.0 32.0 32.0 32.0 32.0 2 30.778311218453776 32.0 32.0 32.0 32.0 32.0 3 30.844704946762292 32.0 32.0 32.0 32.0 32.0 4 30.791815776426176 32.0 32.0 32.0 32.0 32.0 5 30.797814529549505 32.0 32.0 32.0 32.0 32.0 6 34.39220652990295 36.0 36.0 36.0 32.0 36.0 7 34.289835009744294 36.0 36.0 36.0 32.0 36.0 8 34.15606085150877 36.0 36.0 36.0 32.0 36.0 9 34.23553205798468 36.0 36.0 36.0 32.0 36.0 10 34.07397807657001 36.0 36.0 36.0 32.0 36.0 11 34.37617385584338 36.0 36.0 36.0 32.0 36.0 12 34.207634419686904 36.0 36.0 36.0 32.0 36.0 13 34.289653378103075 36.0 36.0 36.0 32.0 36.0 14 34.1973894133298 36.0 36.0 36.0 32.0 36.0 15 34.19073285912748 36.0 36.0 36.0 32.0 36.0 16 34.18623133980335 36.0 36.0 36.0 32.0 36.0 17 34.09522897859201 36.0 36.0 36.0 32.0 36.0 18 34.17592251692365 36.0 36.0 36.0 32.0 36.0 19 34.09638258496188 36.0 36.0 36.0 32.0 36.0 20 33.99468359277204 36.0 36.0 36.0 32.0 36.0 21 33.97777712324934 36.0 36.0 36.0 32.0 36.0 22 33.966373601559084 36.0 36.0 36.0 32.0 36.0 23 34.017534816822035 36.0 36.0 36.0 32.0 36.0 24 33.964635828559366 36.0 36.0 36.0 32.0 36.0 25 33.68627797495447 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 4 7.0 5 18.0 6 33.0 7 13.0 8 38.0 9 28.0 10 15.0 11 7.0 12 15.0 13 9.0 14 89.0 15 96.0 16 133.0 17 171.0 18 234.0 19 336.0 20 465.0 21 611.0 22 887.0 23 1161.0 24 1445.0 25 1848.0 26 2298.0 27 2903.0 28 3758.0 29 4883.0 30 6292.0 31 8650.0 32 12379.0 33 18049.0 34 41202.0 35 95636.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.64009229032179 21.073120443778993 12.477847868240838 23.808939397658378 2 15.290663996151316 20.432387853082385 40.815194446898964 23.461753703867338 3 18.25157214179467 25.54307005787838 29.79828475771098 26.407073042615963 4 11.33133349371327 17.273901111040193 38.00955406194921 33.385211333297335 5 12.427935846944086 39.40521906520394 33.871870672467814 14.294974415384162 6 29.843839801938373 39.15450477224386 17.501338586158283 13.500316839659485 7 28.238925092639004 33.16279892666529 19.88126480504035 18.717011175655355 8 26.202470058040955 35.41186473164043 18.591781872152627 19.793883338165983 9 26.01741899968544 15.376789084617803 21.24193928908462 37.36385262661214 10 16.995703512894377 26.779306073089437 30.757735151556865 25.46725526245932 11 33.42117036286854 23.94312880087706 23.707148721528757 18.92855211472565 12 24.13691397897034 26.531384722775247 29.001558298554276 20.330142999700136 13 27.757323121844752 21.9892740044536 27.272637896879043 22.980764976822606 14 21.416986139781773 23.441954192470266 26.542809397424556 28.598250270323405 15 24.305005923733773 29.421047198147665 23.73819554712195 22.53575133099661 16 22.759691903874796 29.02827819094292 25.55605255526118 22.65597734992111 17 19.831684093065324 29.037443407217335 27.443751321112735 23.68712117860461 18 20.344131046989958 27.525077530238022 30.142183821614104 21.988607601157916 19 23.90246778901436 26.47394128804631 28.0021817967391 21.621409126200234 20 23.743421666855028 26.985047344343492 28.126028824278045 21.145502164523435 21 24.237510503117768 24.921503014579063 27.523819351288136 23.317167131015033 22 23.298704617380537 27.50378393253789 27.25954828691054 21.937963163171034 23 22.540421831473758 27.492249718729887 28.48222225497566 21.4851061948207 24 22.91321674438717 27.85800979818876 27.84621659205826 21.38255686536581 25 22.593262313770197 27.39887574197099 28.592417154762373 21.415444789496444 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 259.0 1 259.0 2 238.0 3 217.0 4 217.0 5 217.0 6 566.5 7 916.0 8 916.0 9 916.0 10 938.5 11 961.0 12 961.0 13 961.0 14 1025.0 15 1089.0 16 1089.0 17 1089.0 18 1877.0 19 2665.0 20 2665.0 21 2665.0 22 4317.5 23 5970.0 24 5970.0 25 5970.0 26 8739.0 27 11508.0 28 11508.0 29 11508.0 30 14188.0 31 16868.0 32 16868.0 33 16868.0 34 18124.0 35 19380.0 36 19380.0 37 19380.0 38 19440.0 39 19500.0 40 19500.0 41 19500.0 42 19492.5 43 19485.0 44 19485.0 45 19485.0 46 22163.0 47 24841.0 48 24841.0 49 24841.0 50 24086.0 51 23331.0 52 23331.0 53 23331.0 54 20559.0 55 17787.0 56 17787.0 57 17787.0 58 15639.5 59 13492.0 60 13492.0 61 13492.0 62 11645.0 63 9798.0 64 9798.0 65 9798.0 66 8311.5 67 6825.0 68 6825.0 69 6825.0 70 5564.5 71 4304.0 72 4304.0 73 4304.0 74 3460.5 75 2617.0 76 2617.0 77 2617.0 78 1859.5 79 1102.0 80 1102.0 81 1102.0 82 772.5 83 443.0 84 443.0 85 443.0 86 319.0 87 195.0 88 195.0 89 195.0 90 123.0 91 51.0 92 51.0 93 51.0 94 35.0 95 19.0 96 19.0 97 19.0 98 52.5 99 86.0 100 86.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.001963585310418293 2 0.0014726889828137195 3 0.002945377965627439 4 0.012763304517718902 5 0.0348536392599247 6 0.06676190055422195 7 0.1133970516766564 8 0.11388794800426098 9 0.12419677088395702 10 0.14088724602251249 11 0.1482506909365811 12 0.13843276438448962 13 0.13646917907407136 14 0.12223318557353871 15 0.14235993500532623 16 0.13057842314281648 17 0.13843276438448962 18 0.11781511862509757 19 0.10161553981414666 20 0.09817926552091465 21 0.0971974728657055 22 0.10652450309019239 23 0.0824705830375683 24 0.09916105817612379 25 0.09670657653810091 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 203709.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.42089451128816 #Duplication Level Percentage of deduplicated Percentage of total 1 67.14516462029852 27.14067616060164 2 15.890018338373348 12.845775100756471 3 6.538662391761091 7.928957483469066 4 3.166101941924436 5.11906690426049 5 1.7986179424587996 3.6350873059118647 6 1.146451949818438 2.7804367995523025 7 0.7505373993514775 2.1236175132173836 8 0.5355776587605203 1.731882243788934 9 0.42506163393692087 1.5463234319544055 >10 2.2479688126206874 17.185789533108505 >50 0.23196220594843397 6.617773392437251 >100 0.1178027956910895 9.228360062638371 >500 0.004857847244993381 1.374509717292805 >1k 0.0012144618112483452 0.7417443510105101 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 1511 0.7417443510105101 No Hit TATCAACGCAGAGTACTTTTTTTTT 937 0.4599698589654851 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 626 0.3073011010804628 No Hit GGTATCAACGCAGAGTACTTTTTTT 625 0.30681020475285825 No Hit CCATAGGGTCTTCTCGTCTTATTAT 612 0.3004285524939988 No Hit CTGTAGGACGTGGAATATGGCAAGA 465 0.22826679233612654 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 453 0.22237603640487164 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 425 0.20863093923194362 No Hit GTATCAACGCAGAGTACATGGGGTG 413 0.20274018330068871 No Hit GTACATGGGGTGGTATCAACGCAAA 403 0.19783122002464298 No Hit GTCCTACAGTGGACATTTCTAAATT 360 0.17672267793764634 No Hit GTATTAGAGGCACTGCCTGCCCAGT 352 0.17279550731680976 No Hit GTCAGGATACCGCGGCCGTTAAACT 349 0.17132281833399604 No Hit GTCCTAAAGTGTGTATTTCTCATTT 338 0.16592295873034574 No Hit CTTTAGGACGTGAAATATGGCGAGG 302 0.1482506909365811 No Hit CCATTGGGATGTCCTGATCCAACAT 297 0.14579620929855822 No Hit GTTCATGCTAGTCCCTAATTAAGGA 296 0.14530531297095367 No Hit TATCAACGCAGAGTACATGGGGTGG 287 0.14088724602251249 No Hit ACCTATAACTTCTCTGTTAACCCAA 282 0.13843276438448962 No Hit CTTCTACACCATTGGGATGTCCTGA 269 0.13205111212563017 No Hit ATAAATAATCCACCTATAACTTCTC 262 0.12861483783239816 No Hit ATCCTGACCGTGCAAAGGTAGCATA 260 0.12763304517718904 No Hit GGTCAGGATACCGCGGCCGTTAAAC 254 0.12468766721156158 No Hit CCTATAACTTCTCTGTTAACCCAAC 254 0.12468766721156158 No Hit GCCTAAAGGAAAGATCCAAAAAGAT 246 0.12076049659072499 No Hit CACTATAAATAATCCACCTATAACT 245 0.12026960026312043 No Hit CTGTTAGTATGAGTAACAAGAATTC 242 0.11879691128030671 No Hit GGTATCAACGCAGAGTACATGGGGT 242 0.11879691128030671 No Hit CTCTAATACTTGTAATGCTAGAGGT 241 0.11830601495270213 No Hit GCAGAGTACTTTTTTTTTTTTTTTT 234 0.11486974065947012 No Hit GATTAAACCTTGTACCTTTTGCATA 231 0.1133970516766564 No Hit GACTATAGGCAATAATCACACTATA 228 0.11192436269384269 No Hit GTTATATAATTTAAGCTCCATAGGG 228 0.11192436269384269 No Hit GTATCAACGCAGAGTACATGGGAGA 226 0.11094257003863353 No Hit CTGTTAACCCAACACCGGAATGCCT 222 0.10897898472821525 No Hit GATTAAAGATAAGAGACAGTTGGAC 222 0.10897898472821525 No Hit ATCGTAAATAGATAGAAACCGACCT 209 0.10259733246935579 No Hit ACGCAGAGTACATGGGGTGGTATCA 208 0.10210643614175122 No Hit ATCAACGCAGAGTACTTTTTTTTTT 206 0.10112464348654207 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTTCCA 30 7.686544E-4 19.001722 15 TTATACG 25 0.0060198624 18.99705 2 TATCACC 40 2.749599E-4 16.62242 3 CTAGGAC 40 2.749599E-4 16.62242 3 GACAGTG 35 0.0021601818 16.28719 7 AGAAAGC 35 0.0021601818 16.28719 8 GTCCTAT 35 0.0021637348 16.283186 1 CTACACC 35 0.0021637348 16.283186 4 GTTGATC 45 6.722025E-4 14.779117 15 CGACCTG 45 6.722025E-4 14.779117 10 CTATCAC 45 6.734577E-4 14.775484 2 CACTGTT 80 1.268345E-7 14.251291 7 CACCATT 40 0.0052550947 14.251291 7 CCCAGCA 40 0.0052636787 14.247787 2 CCTACAG 200 0.0 14.247787 3 AATAAAG 40 0.0052636787 14.247787 3 GCTATCA 55 1.9495709E-4 13.816037 1 TCCTACA 220 0.0 13.816037 2 ATACACT 55 1.9495709E-4 13.816037 4 ACACCAT 50 0.0014907279 13.301205 6 >>END_MODULE