##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062135_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1195891 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.26848099032437 32.0 32.0 32.0 32.0 32.0 2 31.419772370558857 32.0 32.0 32.0 32.0 32.0 3 31.559033390166828 32.0 32.0 32.0 32.0 32.0 4 31.638605023367514 32.0 32.0 32.0 32.0 32.0 5 31.616031895883488 32.0 32.0 32.0 32.0 32.0 6 35.24566118484042 36.0 36.0 36.0 36.0 36.0 7 35.24924512351042 36.0 36.0 36.0 36.0 36.0 8 35.20265392080047 36.0 36.0 36.0 36.0 36.0 9 35.29448336010556 36.0 36.0 36.0 36.0 36.0 10 35.16669077700225 36.0 36.0 36.0 36.0 36.0 11 35.29152071551672 36.0 36.0 36.0 36.0 36.0 12 35.20712088309052 36.0 36.0 36.0 36.0 36.0 13 35.24734612100936 36.0 36.0 36.0 36.0 36.0 14 35.210087708662414 36.0 36.0 36.0 36.0 36.0 15 35.18348076873227 36.0 36.0 36.0 36.0 36.0 16 35.19503700588097 36.0 36.0 36.0 36.0 36.0 17 35.172624428146044 36.0 36.0 36.0 36.0 36.0 18 35.17448329320983 36.0 36.0 36.0 36.0 36.0 19 35.16309429538311 36.0 36.0 36.0 36.0 36.0 20 35.16296384871197 36.0 36.0 36.0 36.0 36.0 21 35.14952951397744 36.0 36.0 36.0 36.0 36.0 22 35.13963061850955 36.0 36.0 36.0 36.0 36.0 23 35.10954677307547 36.0 36.0 36.0 36.0 36.0 24 35.09343911777913 36.0 36.0 36.0 36.0 36.0 25 35.06399997993128 36.0 36.0 36.0 36.0 36.0 26 35.0265609491166 36.0 36.0 36.0 36.0 36.0 27 35.0200436327391 36.0 36.0 36.0 36.0 36.0 28 34.993304573744595 36.0 36.0 36.0 36.0 36.0 29 34.967998755739444 36.0 36.0 36.0 36.0 36.0 30 34.93831795707134 36.0 36.0 36.0 36.0 36.0 31 34.94898531722373 36.0 36.0 36.0 36.0 36.0 32 34.91843821886777 36.0 36.0 36.0 32.0 36.0 33 34.9059972857058 36.0 36.0 36.0 32.0 36.0 34 34.8889288405047 36.0 36.0 36.0 32.0 36.0 35 34.877269751172975 36.0 36.0 36.0 32.0 36.0 36 34.849021357297616 36.0 36.0 36.0 32.0 36.0 37 34.83244375950651 36.0 36.0 36.0 32.0 36.0 38 34.80253551536051 36.0 36.0 36.0 32.0 36.0 39 34.79237656274694 36.0 36.0 36.0 32.0 36.0 40 34.78148342950988 36.0 36.0 36.0 32.0 36.0 41 34.74504616223385 36.0 36.0 36.0 32.0 36.0 42 34.7141018704882 36.0 36.0 36.0 32.0 36.0 43 34.711788114468625 36.0 36.0 36.0 32.0 36.0 44 34.661078643454964 36.0 36.0 36.0 32.0 36.0 45 34.65115215349894 36.0 36.0 36.0 32.0 36.0 46 34.62112349704112 36.0 36.0 36.0 32.0 36.0 47 34.594687977416 36.0 36.0 36.0 32.0 36.0 48 34.560900617196715 36.0 36.0 36.0 32.0 36.0 49 34.54675384295057 36.0 36.0 36.0 32.0 36.0 50 34.13043830917701 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 3.0 20 7.0 21 37.0 22 76.0 23 190.0 24 586.0 25 1352.0 26 2871.0 27 5636.0 28 9526.0 29 15343.0 30 23091.0 31 34209.0 32 51998.0 33 88388.0 34 200902.0 35 761675.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.11510572325008 17.933179259021333 11.674098535624875 26.27761648210371 2 16.062828696220095 20.146208928913392 37.34917291271367 26.441789462152844 3 18.36673941583256 23.837142212076362 28.829323767236115 28.96679460485496 4 12.19458964069468 16.00246176281952 36.07494328496493 35.72800531152087 5 14.2143389322271 37.02912723651236 33.542939950212855 15.213593881047688 6 34.5363415227642 35.880778432148084 16.385690669132888 13.197189375954832 7 30.1335991323624 30.395579530241466 20.60681115586621 18.86401018152992 8 27.926207321570278 33.70976117388625 19.10332965128093 19.260701853262546 9 27.109075994384103 13.92894502927106 18.48830704470558 40.47367193163925 10 15.773093032726226 26.995604114421802 31.504710713601824 25.726592139250148 11 37.82343039624848 21.034860200469776 22.1056099594361 19.036099443845636 12 24.2637497899056 23.640448836892325 29.287033684508035 22.808767688694036 13 29.45837036987485 19.29791260240273 25.306654201762534 25.937062825959888 14 23.36901941732148 19.76944387072066 25.16182494892929 31.69971176302857 15 24.95369561272725 27.71891418197812 22.07659393707286 25.25079626822177 16 25.652215723083742 25.78650957240872 24.026474117494576 24.534800587012963 17 23.857525476820214 26.269032880086897 25.23457405398987 24.638867589103018 18 24.64902679094799 25.227759432522586 26.355121587371404 23.768092189158025 19 25.609859092509268 24.996926977458646 25.218268220096984 24.174945709935102 20 25.609382865533558 24.69875790420794 24.81356856278462 24.87829066747388 21 26.662630624362922 24.588026835221605 24.360414118009082 24.38892842240639 22 25.79892314600578 24.582089839291374 25.224372455349194 24.394614559353652 23 24.364615474667403 24.455760981361163 25.69918638001823 25.480437163953205 24 24.708705795780478 25.11267947184895 25.49139956684255 24.687215165528027 25 24.8457213384531 24.53741487497157 25.529313781892622 25.08755000468271 26 24.293473034614532 25.74829519560827 25.898811340555323 24.059420429221873 27 24.97635638268961 24.902352487659744 25.278141758014787 24.843149371635853 28 24.317277572720872 24.972865034276186 25.8901857553555 24.819671637647446 29 24.33279481956444 24.922066019781184 25.736609905308544 25.008529255345834 30 24.41459182606878 25.199456464931536 25.962914184174767 24.42303752482492 31 25.008968268634973 25.007964825990502 24.900763703472663 25.08230320190186 32 24.93101291438243 24.932852569998897 24.810180988664378 25.325953526954297 33 24.37241248978793 24.68949877455182 25.611490698551453 25.326598037108795 34 25.057070848127154 25.09269309179334 25.737238289396448 24.112997770683062 35 25.676045184795576 24.616498688423423 25.73115063354542 23.976305493235575 36 24.112207832171574 25.526219846674604 25.180033581740098 25.18153873941372 37 25.387897838308376 25.18545091477411 25.114205652960315 24.312445593957197 38 24.685694599256955 24.891817063595262 25.468876344081526 24.953611993066257 39 25.399328696309503 24.612545384912558 24.997198720275076 24.990927198502863 40 25.683862492484682 24.877434481905123 25.376142140044532 24.062560885565656 41 24.324950350162013 25.357583359464826 25.936908121668235 24.380558168704923 42 25.629337501181197 25.59488418417138 25.24759140373016 23.52818691091727 43 24.979010289139538 24.533376148998514 25.616980425213075 24.87063313664887 44 24.412500104529908 25.435387973206897 25.162773972889124 24.989337949374075 45 24.57764669580611 25.545653793632862 25.217186976056542 24.659512534504486 46 24.3044562796909 25.255568572654223 25.197953277256673 25.242021870398197 47 24.82406202649773 25.009616381631538 25.52413460927387 24.642186982596858 48 25.601336638134324 25.56153184884884 24.395485668603385 24.441645844413447 49 24.648532751763607 25.77133806750713 24.70313853646462 24.876990644264637 50 24.95944382007439 25.83679524230018 24.594020095796207 24.609740841829225 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 168.0 1 105.5 2 43.0 3 126.0 4 209.0 5 214.5 6 220.0 7 169.5 8 119.0 9 168.5 10 218.0 11 383.5 12 549.0 13 1027.5 14 1506.0 15 1916.5 16 2327.0 17 2404.5 18 2482.0 19 2604.5 20 2727.0 21 3193.5 22 3660.0 23 4428.5 24 5197.0 25 6726.0 26 8255.0 27 10764.0 28 13273.0 29 15497.5 30 17722.0 31 19568.5 32 21415.0 33 24820.5 34 28226.0 35 32300.5 36 36375.0 37 42042.0 38 47709.0 39 50784.5 40 53860.0 41 58192.0 42 62524.0 43 63552.0 44 64580.0 45 70647.5 46 76715.0 47 81437.5 48 86160.0 49 89408.5 50 92657.0 51 89222.0 52 85787.0 53 84009.0 54 82231.0 55 83882.5 56 85534.0 57 83287.5 58 81041.0 59 73569.0 60 66097.0 61 57868.5 62 49640.0 63 42454.0 64 35268.0 65 29727.0 66 24186.0 67 20931.5 68 17677.0 69 16327.5 70 14978.0 71 11662.5 72 8347.0 73 7563.5 74 6780.0 75 4878.0 76 2976.0 77 2705.0 78 2434.0 79 2038.5 80 1643.0 81 1327.0 82 1011.0 83 857.0 84 703.0 85 553.0 86 403.0 87 272.0 88 141.0 89 93.5 90 46.0 91 33.5 92 21.0 93 19.0 94 17.0 95 18.0 96 19.0 97 14.0 98 9.0 99 7.5 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.030437556600058036 2 0.005686136947263588 3 8.361966098917042E-5 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 5.017179659350226E-4 17 0.0 18 1.6723932197834084E-4 19 0.0 20 7.525769489025338E-4 21 0.0 22 0.0 23 8.361966098917042E-5 24 0.001756012880772579 25 2.508589829675113E-4 26 5.017179659350226E-4 27 6.689572879133634E-4 28 0.001421534236815897 29 5.853376269241929E-4 30 0.0013379145758267267 31 6.689572879133634E-4 32 0.0012542949148375564 33 1.6723932197834084E-4 34 7.525769489025338E-4 35 1.6723932197834084E-4 36 2.508589829675113E-4 37 0.0018396325417617493 38 0.0 39 7.525769489025338E-4 40 0.0 41 0.0013379145758267267 42 0.0058533762692419295 43 0.005602517286274418 44 0.005100799320339395 45 0.0026758291516534535 46 0.0023413505076967716 47 0.0012542949148375564 48 0.004599081354404373 49 0.00393012406649101 50 0.001588773558794238 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1195891.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.5918153189529 #Duplication Level Percentage of deduplicated Percentage of total 1 72.11831403588033 36.48596424817505 2 15.902122801310023 16.09034519886373 3 5.545344096631004 8.416470732504042 4 2.3844087290194245 4.825262642537996 5 1.2183119495507357 3.0818306576272136 6 0.6984984675209306 2.120298328163432 7 0.45474218438524855 1.6104362827109004 8 0.2991727110359185 1.210855243615972 9 0.21587960854080301 0.9829567157781737 >10 0.985054788595106 8.931350466996484 >50 0.08785557248078325 3.131594335519363 >100 0.0798380956839397 8.601212926900025 >500 0.007967207135797858 2.899624176859189 >1k 0.00248975222993683 1.6117980437484876 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1692 0.14148446639367634 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1536 0.12843979927936577 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1477 0.12350623928100472 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1428 0.11940887589253536 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 1365 0.11414083725021762 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 1306 0.10920727725185657 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1284 0.10736764471009483 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 1275 0.10661506776119228 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1253 0.10477543521943053 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 1225 0.10243408471173375 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 1212 0.10134702911887454 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.361966098917042E-5 2 0.0 0.0 0.0 0.0 8.361966098917042E-5 3 0.0 0.0 0.0 0.0 8.361966098917042E-5 4 0.0 0.0 0.0 0.0 8.361966098917042E-5 5 0.0 0.0 0.0 0.0 8.361966098917042E-5 6 0.0 0.0 0.0 0.0 1.6723932197834084E-4 7 0.0 0.0 0.0 8.361966098917042E-5 1.6723932197834084E-4 8 0.0 0.0 0.0 8.361966098917042E-5 1.6723932197834084E-4 9 0.0 0.0 0.0 8.361966098917042E-5 1.6723932197834084E-4 10 0.0 0.0 0.0 8.361966098917042E-5 1.6723932197834084E-4 11 0.0 0.0 0.0 8.361966098917042E-5 1.6723932197834084E-4 12 0.0 0.0 0.0 8.361966098917042E-5 1.6723932197834084E-4 13 0.0 0.0 0.0 8.361966098917042E-5 1.6723932197834084E-4 14 0.0 0.0 0.0 8.361966098917042E-5 1.6723932197834084E-4 15 0.0 0.0 0.0 8.361966098917042E-5 1.6723932197834084E-4 16 0.0 0.0 0.0 1.6723932197834084E-4 1.6723932197834084E-4 17 0.0 0.0 0.0 1.6723932197834084E-4 1.6723932197834084E-4 18 0.0 0.0 0.0 1.6723932197834084E-4 1.6723932197834084E-4 19 0.0 0.0 0.0 2.508589829675113E-4 1.6723932197834084E-4 20 0.0 0.0 0.0 4.180983049458521E-4 2.508589829675113E-4 21 0.0 0.0 0.0 5.853376269241929E-4 2.508589829675113E-4 22 0.0 0.0 0.0 6.689572879133634E-4 2.508589829675113E-4 23 0.0 0.0 0.0 7.525769489025337E-4 2.508589829675113E-4 24 0.0 0.0 0.0 0.0010034359318700451 2.508589829675113E-4 25 0.0 0.0 0.0 0.0010034359318700451 2.508589829675113E-4 26 0.0 0.0 0.0 0.0012542949148375562 2.508589829675113E-4 27 0.0 0.0 0.0 0.001588773558794238 3.344786439566817E-4 28 0.0 0.0 0.0 0.0018396325417617493 3.344786439566817E-4 29 0.0 0.0 0.0 0.002843068473631794 3.344786439566817E-4 30 0.0 0.0 0.0 0.004766320676382714 3.344786439566817E-4 31 0.0 0.0 0.0 0.008278346437927872 3.344786439566817E-4 32 0.0 0.0 0.0 0.013211906436288926 3.344786439566817E-4 33 0.0 0.0 0.0 0.017392889485747447 3.344786439566817E-4 34 0.0 0.0 0.0 0.022828167450043523 3.344786439566817E-4 35 0.0 0.0 0.0 0.02809620609236126 3.344786439566817E-4 36 0.0 0.0 0.0 0.0342004413445707 3.344786439566817E-4 37 0.0 0.0 0.0 0.042980505748433595 3.344786439566817E-4 38 0.0 0.0 0.0 0.05635965150670086 3.344786439566817E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1495 0.0 27.08521 1 ATTTCGT 175 0.0 25.144243 42 GATTTCG 170 0.0 24.588562 41 GTATAGG 105 3.0595402E-9 23.054674 1 CGCAATA 380 0.0 22.57925 36 ATACGAA 390 0.0 22.000294 40 TTACACG 60 2.873307E-4 21.999372 4 TACGAAT 395 0.0 21.721807 41 CAATACG 395 0.0 21.721807 38 GGTATCA 630 0.0 20.958794 1 CGAATGC 410 0.0 20.927982 43 TCTAGCG 410 0.0 20.926231 28 CTAGCGG 415 0.0 20.67411 29 GTCCTAC 545 0.0 20.189663 1 AATACGA 425 0.0 20.188503 39 TAGCGGC 425 0.0 20.187658 30 CGCCGGT 425 0.0 20.187658 7 GCAATAC 430 0.0 19.953753 37 GCGCAAT 430 0.0 19.952919 35 CGGTCCA 435 0.0 19.724401 10 >>END_MODULE