##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062134_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1001145 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.265051516014164 32.0 32.0 32.0 32.0 32.0 2 31.42221356546754 32.0 32.0 32.0 32.0 32.0 3 31.550463719041698 32.0 32.0 32.0 32.0 32.0 4 31.626979108920285 32.0 32.0 32.0 32.0 32.0 5 31.605968166449415 32.0 32.0 32.0 32.0 32.0 6 35.23391117170839 36.0 36.0 36.0 36.0 36.0 7 35.23828516348781 36.0 36.0 36.0 36.0 36.0 8 35.18761418176188 36.0 36.0 36.0 36.0 36.0 9 35.27740037656883 36.0 36.0 36.0 36.0 36.0 10 35.14972456537265 36.0 36.0 36.0 36.0 36.0 11 35.2777120197374 36.0 36.0 36.0 36.0 36.0 12 35.19297604243142 36.0 36.0 36.0 36.0 36.0 13 35.22421127808659 36.0 36.0 36.0 36.0 36.0 14 35.19385703369642 36.0 36.0 36.0 36.0 36.0 15 35.16953488255947 36.0 36.0 36.0 36.0 36.0 16 35.180956804458894 36.0 36.0 36.0 36.0 36.0 17 35.163732526257434 36.0 36.0 36.0 36.0 36.0 18 35.16217830583982 36.0 36.0 36.0 36.0 36.0 19 35.15152650215503 36.0 36.0 36.0 36.0 36.0 20 35.150047195960624 36.0 36.0 36.0 36.0 36.0 21 35.14296230815716 36.0 36.0 36.0 36.0 36.0 22 35.12788257445225 36.0 36.0 36.0 36.0 36.0 23 35.09370370925291 36.0 36.0 36.0 36.0 36.0 24 35.07238711675132 36.0 36.0 36.0 36.0 36.0 25 35.06546803909524 36.0 36.0 36.0 36.0 36.0 26 35.02601421372528 36.0 36.0 36.0 36.0 36.0 27 35.0076971867212 36.0 36.0 36.0 36.0 36.0 28 34.991057239460815 36.0 36.0 36.0 36.0 36.0 29 34.972240784301974 36.0 36.0 36.0 36.0 36.0 30 34.949800478452175 36.0 36.0 36.0 36.0 36.0 31 34.95405660518706 36.0 36.0 36.0 36.0 36.0 32 34.92341668789236 36.0 36.0 36.0 32.0 36.0 33 34.906942550779355 36.0 36.0 36.0 32.0 36.0 34 34.890841985926116 36.0 36.0 36.0 32.0 36.0 35 34.88189922538693 36.0 36.0 36.0 32.0 36.0 36 34.85580909858212 36.0 36.0 36.0 32.0 36.0 37 34.85136618571735 36.0 36.0 36.0 32.0 36.0 38 34.8300635772041 36.0 36.0 36.0 32.0 36.0 39 34.81079464013704 36.0 36.0 36.0 32.0 36.0 40 34.80397744582453 36.0 36.0 36.0 32.0 36.0 41 34.766100814567324 36.0 36.0 36.0 32.0 36.0 42 34.74665308222086 36.0 36.0 36.0 32.0 36.0 43 34.74281847284859 36.0 36.0 36.0 32.0 36.0 44 34.68797227174885 36.0 36.0 36.0 32.0 36.0 45 34.68483786064956 36.0 36.0 36.0 32.0 36.0 46 34.654187954791766 36.0 36.0 36.0 32.0 36.0 47 34.633193992878155 36.0 36.0 36.0 32.0 36.0 48 34.60784501745501 36.0 36.0 36.0 32.0 36.0 49 34.59442738064916 36.0 36.0 36.0 32.0 36.0 50 34.17044284294483 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 10.0 21 24.0 22 58.0 23 196.0 24 470.0 25 1031.0 26 2260.0 27 4581.0 28 7758.0 29 12754.0 30 19145.0 31 28756.0 32 43795.0 33 73926.0 34 169527.0 35 636852.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.1678706673461 18.11536424767443 12.54608674799916 26.17067833698031 2 15.951142085711117 19.8942770353219 37.11471401158917 27.039866867377814 3 18.13776853056956 23.47456856812663 28.774310962569782 29.613351938734027 4 12.562216262379575 16.118843923707356 35.60013784217072 35.71880197174235 5 14.702680133926787 36.56167344557826 33.09733664687597 15.63830977361898 6 34.805417407902766 35.08689567823977 16.47167287790056 13.6360140359569 7 30.61304805997133 30.379515454804253 20.228837980512314 18.778598504712104 8 28.209799779252755 33.021190736606584 19.111017884522223 19.657991599618438 9 27.164596536965174 14.244989487037344 18.838429997652685 39.751983978344796 10 16.526377297993797 26.73089312736916 30.905712958662328 25.83701661597471 11 37.12409291361391 21.30900119363329 21.917804114289137 19.64910177846366 12 24.28449425407908 23.70725519280424 28.617433039170148 23.390817513946534 13 29.225436874778378 19.572189842630188 25.19265441069975 26.009718871891685 14 23.59648202807785 19.504467384844354 25.17577373906877 31.72327684800903 15 25.183065390128302 27.057319369322126 22.10748692746805 25.652128313081523 16 25.800316640612902 25.916584676392297 23.53318982954347 24.749908853451334 17 24.15773938840028 26.005723446653583 25.054512583092357 24.78202458185378 18 24.81750876996716 25.237827924853967 25.80427990379006 24.140383401388814 19 25.538158808164653 25.135419944163935 25.380838939414367 23.945582308257045 20 25.788224059899534 24.3998110160087 24.846999879138146 24.96496504495362 21 26.58890887715341 24.38432871228186 24.66520766763589 24.36155474292883 22 25.936302933141555 24.287690594269563 25.07089382656858 24.705112646020307 23 24.636016397241555 24.3866017276236 25.33651502680933 25.640866848325516 24 24.598107353831338 25.0177298234609 25.316789493556335 25.067373329151426 25 24.969135309206266 24.449130195056856 25.319933995509135 25.26180050022774 26 24.729409555468543 25.28747113302382 25.497530824736504 24.485588486771135 27 25.28342632713441 24.778602835561788 24.99175941075292 24.946211426550878 28 24.802097640154827 24.669546759895116 25.52038956174304 25.00796603820702 29 24.614339652795813 24.892822182711708 25.516810835647362 24.976027328845117 30 24.724487156052195 24.943439083518374 25.611382303849737 24.720691456579697 31 25.122185830339244 24.730032492990482 24.827022021917035 25.32075965475324 32 25.125732042667487 24.897691324963517 24.693223804534245 25.283352827834754 33 24.68029042804075 24.680590085532238 25.13786741754175 25.501252068885265 34 25.225543782263347 24.722814882293715 25.451986543286825 24.599654792156112 35 25.675704021711226 24.53890111382912 25.42868586942299 24.356708995036662 36 24.663359107258618 24.984093149716173 25.019053260230077 25.333494482795132 37 25.45276382963634 24.934648781525656 25.024147737204693 24.588439651633305 38 24.9390447937112 24.605227015067747 25.345679197319072 25.110048993901984 39 25.309147571768186 24.662484767365203 24.87594142677348 25.152426234093134 40 25.79945961873655 24.72908519744892 25.081581589080503 24.38987359473403 41 24.599556505583635 25.220948119144175 25.445392252831773 24.734103122440416 42 25.674606583544936 25.09854140736908 25.02512231520864 24.201729693877347 43 25.339398606944897 24.323325432095803 25.15150697876056 25.18576898219874 44 24.851164314596687 24.964439259058 25.049745081430103 25.134651344915216 45 25.14106601859704 25.09222106685765 24.787963964611883 24.978748949933426 46 24.767687745160224 25.105605560111517 24.97355490939747 25.15315178533079 47 24.935223456600212 24.933225722031217 25.310597782115078 24.82095303925349 48 25.761124823572068 25.258985712958626 24.341810198008822 24.63807926546048 49 24.971956044658565 25.501369983428347 24.531743360100368 24.994930611812723 50 25.27094383346818 25.479008720146233 24.516196697731562 24.73385074865402 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 120.0 1 73.5 2 27.0 3 71.0 4 115.0 5 121.0 6 127.0 7 114.5 8 102.0 9 140.5 10 179.0 11 302.5 12 426.0 13 797.5 14 1169.0 15 1481.5 16 1794.0 17 1878.5 18 1963.0 19 2039.0 20 2115.0 21 2594.5 22 3074.0 23 3757.0 24 4440.0 25 5566.0 26 6692.0 27 8337.5 28 9983.0 29 11477.0 30 12971.0 31 14487.0 32 16003.0 33 18176.0 34 20349.0 35 23385.0 36 26421.0 37 31119.0 38 35817.0 39 39784.0 40 43751.0 41 47577.5 42 51404.0 43 53647.0 44 55890.0 45 60220.5 46 64551.0 47 68524.5 48 72498.0 49 75605.5 50 78713.0 51 76391.0 52 74069.0 53 73742.5 54 73416.0 55 73828.5 56 74241.0 57 71707.0 58 69173.0 59 63235.0 60 57297.0 61 50166.0 62 43035.0 63 37348.0 64 31661.0 65 26522.0 66 21383.0 67 18242.5 68 15102.0 69 13401.0 70 11700.0 71 9188.0 72 6676.0 73 5923.5 74 5171.0 75 3789.0 76 2407.0 77 2128.5 78 1850.0 79 1666.5 80 1483.0 81 1147.5 82 812.0 83 655.5 84 499.0 85 401.5 86 304.0 87 200.5 88 97.0 89 60.0 90 23.0 91 18.5 92 14.0 93 14.5 94 15.0 95 13.5 96 12.0 97 9.5 98 7.0 99 5.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03146397375005618 2 0.0037956539761972536 3 1.9977126190511864E-4 4 0.0 5 9.988563095255932E-5 6 1.9977126190511864E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 9.988563095255933E-4 17 0.0 18 9.988563095255932E-5 19 0.0 20 1.9977126190511864E-4 21 1.9977126190511864E-4 22 0.0 23 9.988563095255932E-5 24 6.991994166679152E-4 25 9.988563095255932E-5 26 9.988563095255932E-5 27 2.9965689285767796E-4 28 0.0019977126190511866 29 4.994281547627967E-4 30 0.0011986275714307118 31 5.993137857153559E-4 32 7.990850476204746E-4 33 1.9977126190511864E-4 34 8.989706785730338E-4 35 3.995425238102373E-4 36 3.995425238102373E-4 37 0.0015981700952409491 38 0.0 39 4.994281547627967E-4 40 0.0 41 4.994281547627967E-4 42 0.004295082130960051 43 0.0035958827142921353 44 0.004095310869054933 45 0.0017979413571460677 46 0.0013983988333358304 47 0.0010987419404781525 48 0.0027967976666716608 49 0.0037956539761972536 50 0.0014982844642883898 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1001145.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.11524691635452 #Duplication Level Percentage of deduplicated Percentage of total 1 78.86961481634457 47.41266368882327 2 13.262681263731457 15.94578717884251 3 3.732120086686576 6.730719615979498 4 1.4878389222214339 3.5776721672441716 5 0.6786068994833712 2.0397310660792316 6 0.4465284074457068 1.6105899281259135 7 0.2804009140427574 1.1799459128276304 8 0.20305468407109512 0.9765345976364995 9 0.14737865963294156 0.7973734062632089 >10 0.7636183667042 8.339971534209873 >50 0.06825836462736809 2.8634931974121436 >100 0.055226857184266794 6.593010941452353 >500 0.004504909330529104 1.8292966409904021 >1k 1.6684849372330016E-4 0.10321012411334159 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1029 0.10278231425018354 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 1.9977126190511864E-4 11 0.0 0.0 0.0 0.0 1.9977126190511864E-4 12 0.0 0.0 0.0 0.0 3.995425238102373E-4 13 0.0 0.0 0.0 0.0 4.994281547627965E-4 14 0.0 0.0 0.0 0.0 6.991994166679152E-4 15 0.0 0.0 0.0 0.0 9.98856309525593E-4 16 0.0 0.0 0.0 9.988563095255932E-5 0.0010987419404781525 17 0.0 0.0 0.0 9.988563095255932E-5 0.0010987419404781525 18 0.0 0.0 0.0 9.988563095255932E-5 0.0012985132023832712 19 0.0 0.0 0.0 9.988563095255932E-5 0.0012985132023832712 20 0.0 0.0 0.0 2.9965689285767796E-4 0.0012985132023832712 21 0.0 0.0 0.0 3.995425238102373E-4 0.0012985132023832712 22 0.0 0.0 0.0 3.995425238102373E-4 0.0012985132023832712 23 0.0 0.0 0.0 5.993137857153559E-4 0.0012985132023832712 24 9.988563095255932E-5 0.0 0.0 7.990850476204746E-4 0.0012985132023832712 25 9.988563095255932E-5 0.0 0.0 9.98856309525593E-4 0.0012985132023832712 26 9.988563095255932E-5 0.0 0.0 0.0013983988333358304 0.0014982844642883898 27 9.988563095255932E-5 0.0 0.0 0.001897826988098627 0.0015981700952409491 28 9.988563095255932E-5 0.0 0.0 0.002497140773813983 0.0017979413571460677 29 9.988563095255932E-5 0.0 0.0 0.003396111452387017 0.0017979413571460677 30 9.988563095255932E-5 0.0 0.0 0.004594739023817729 0.0017979413571460677 31 9.988563095255932E-5 0.0 0.0 0.008090736107157305 0.001897826988098627 32 9.988563095255932E-5 0.0 0.0 0.010687762511923847 0.001897826988098627 33 9.988563095255932E-5 0.0 0.0 0.013684331440500627 0.001897826988098627 34 9.988563095255932E-5 0.0 0.0 0.01897826988098627 0.001897826988098627 35 9.988563095255932E-5 0.0 0.0 0.02337323764289888 0.001897826988098627 36 9.988563095255932E-5 0.0 0.0 0.030165460547672916 0.001897826988098627 37 9.988563095255932E-5 0.0 0.0 0.03965459548816605 0.001897826988098627 38 9.988563095255932E-5 0.0 0.0 0.05413801197628715 0.001897826988098627 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 600 0.0 25.307268 1 GTATCAA 1390 0.0 25.172697 1 TTCGGGT 50 0.0025803177 21.999725 38 CGGATCG 115 8.767529E-9 21.043215 26 TCGATTT 105 7.743802E-8 20.95212 30 GTATATA 150 2.1827873E-11 20.539232 1 TAGACCG 55 0.0044834064 19.99975 5 CGTCGTA 300 0.0 19.799753 10 ACCGTCG 285 0.0 19.298004 8 TACCGTC 320 0.0 19.24976 7 CGATTTT 115 2.0208063E-7 19.130196 31 ATACCGT 295 0.0 18.643835 6 ATCGATT 120 3.1610398E-7 18.333105 29 GTAAACG 205 0.0 18.243675 27 GTACTAA 85 1.4273782E-4 18.122852 1 TCTATAC 110 2.795785E-6 17.999775 3 CGAACGT 135 5.5235432E-8 17.925703 26 GATAATT 135 5.5235432E-8 17.925703 7 CCGTCGT 310 0.0 17.741714 9 TCAACGC 2140 0.0 16.7568 4 >>END_MODULE