##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062133_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3337537 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.204029798021715 32.0 32.0 32.0 32.0 32.0 2 31.291653695524573 32.0 32.0 32.0 32.0 32.0 3 31.473392504712308 32.0 32.0 32.0 32.0 32.0 4 31.5725039153124 32.0 32.0 32.0 32.0 32.0 5 31.528150549342225 32.0 32.0 32.0 32.0 32.0 6 35.1435609552793 36.0 36.0 36.0 36.0 36.0 7 35.14578594933929 36.0 36.0 36.0 36.0 36.0 8 35.084946773623784 36.0 36.0 36.0 36.0 36.0 9 35.204626046093274 36.0 36.0 36.0 36.0 36.0 10 35.04313090761241 36.0 36.0 36.0 36.0 36.0 11 35.19707167291329 36.0 36.0 36.0 36.0 36.0 12 35.100345254599425 36.0 36.0 36.0 36.0 36.0 13 35.153568934217056 36.0 36.0 36.0 36.0 36.0 14 35.10637544992011 36.0 36.0 36.0 36.0 36.0 15 35.07335499201957 36.0 36.0 36.0 36.0 36.0 16 35.089480056700495 36.0 36.0 36.0 36.0 36.0 17 35.066318066286605 36.0 36.0 36.0 36.0 36.0 18 35.067356257024265 36.0 36.0 36.0 36.0 36.0 19 35.05892998339794 36.0 36.0 36.0 36.0 36.0 20 35.06386895486102 36.0 36.0 36.0 36.0 36.0 21 35.05033382401454 36.0 36.0 36.0 36.0 36.0 22 35.02979742247052 36.0 36.0 36.0 36.0 36.0 23 34.99728452448617 36.0 36.0 36.0 36.0 36.0 24 34.97783035813536 36.0 36.0 36.0 36.0 36.0 25 34.959056334057124 36.0 36.0 36.0 32.0 36.0 26 34.91266823408999 36.0 36.0 36.0 32.0 36.0 27 34.90499131545209 36.0 36.0 36.0 32.0 36.0 28 34.87778053097239 36.0 36.0 36.0 32.0 36.0 29 34.856216425465846 36.0 36.0 36.0 32.0 36.0 30 34.83544571940326 36.0 36.0 36.0 32.0 36.0 31 34.84198077804081 36.0 36.0 36.0 32.0 36.0 32 34.81484969305209 36.0 36.0 36.0 32.0 36.0 33 34.792674957610956 36.0 36.0 36.0 32.0 36.0 34 34.78424598738531 36.0 36.0 36.0 32.0 36.0 35 34.7651906181115 36.0 36.0 36.0 32.0 36.0 36 34.745146196132055 36.0 36.0 36.0 32.0 36.0 37 34.737086660013055 36.0 36.0 36.0 32.0 36.0 38 34.71543895992764 36.0 36.0 36.0 32.0 36.0 39 34.70159911335814 36.0 36.0 36.0 32.0 36.0 40 34.689772128368915 36.0 36.0 36.0 32.0 36.0 41 34.65770956247077 36.0 36.0 36.0 32.0 36.0 42 34.622163889119435 36.0 36.0 36.0 32.0 36.0 43 34.6299513683294 36.0 36.0 36.0 32.0 36.0 44 34.58015626493429 36.0 36.0 36.0 32.0 36.0 45 34.56526474463055 36.0 36.0 36.0 32.0 36.0 46 34.55321753736363 36.0 36.0 36.0 32.0 36.0 47 34.533924268105494 36.0 36.0 36.0 32.0 36.0 48 34.51294742200611 36.0 36.0 36.0 32.0 36.0 49 34.492454166051196 36.0 36.0 36.0 32.0 36.0 50 34.04121752058479 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 2.0 19 4.0 20 26.0 21 73.0 22 193.0 23 634.0 24 1605.0 25 3787.0 26 8410.0 27 15956.0 28 28093.0 29 46298.0 30 70409.0 31 106406.0 32 163365.0 33 282813.0 34 630213.0 35 1979249.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.826755506615186 17.631179141414307 12.105457027106654 26.436608324863847 2 16.502617004114576 19.387643809379984 36.56108160714136 27.548657579364082 3 18.6684819817296 22.772895756111783 27.99460319296102 30.564019069197602 4 12.738285747843396 15.460592646613355 34.795209760970444 37.00591184457281 5 15.15276085328792 36.17730679839654 32.574020902240186 16.095911446075352 6 36.00503725356424 34.492393034016445 15.802480454874903 13.70008925754442 7 31.71722141207723 29.62052555522231 19.65038889456506 19.011864138135397 8 28.722378208840833 32.81359877059041 18.459870257618118 20.004152762950643 9 27.050216971377395 14.313009863261442 18.202374984906534 40.43439818045463 10 16.458968532474255 26.160167261117184 30.346968542062168 27.033895664346392 11 38.193973579918364 20.872188083607764 21.397455668656256 19.536382667817616 12 24.986899021643804 23.19039459337829 27.808590586411476 24.014115798566426 13 29.284049884690415 18.866517434862896 25.07037375166178 26.77905892878491 14 23.785983496212925 19.3119357178662 24.216091087529517 32.68598969839136 15 25.43345586880385 27.009198699520038 21.41929812313691 26.138047308539203 16 26.487256113967188 25.6102581496092 22.832958104845453 25.069527631578158 17 24.55343566228629 25.980715719406255 24.475803564125282 24.99004505418217 18 25.498459789586974 24.762556512583703 25.30637168613565 24.432612011693674 19 26.028670860380494 24.78185247495532 24.623621924564087 24.565854740100104 20 26.26296916404097 24.087739083849982 24.142809716880617 25.50648203522843 21 27.063768001303956 23.951981341924103 23.96076027344724 25.023490383324702 22 26.312277586735366 23.986370787799505 24.52979547492657 25.171556150538553 23 24.669276975589177 23.999471466375194 25.156372845116877 26.174878712918755 24 25.104359300412167 24.6276263607458 24.7528395437554 25.515174795086633 25 25.214567295404898 24.167925331629878 24.818076596142475 25.799430776822746 26 24.977266019778188 25.216096407057346 25.001295874325656 24.805341698838806 27 25.64756895911666 24.44808586972187 24.523650937327435 25.380694233834035 28 25.055715589518577 24.429465771541814 25.145813345733885 25.369005293205728 29 24.924232550265693 24.69879536121935 25.038778851930253 25.338193236584704 30 24.924411781185327 24.779782177689768 25.213910689197366 25.081895351927542 31 25.685433684032645 24.485321744695614 24.248798959227834 25.580445612043906 32 25.523624213035596 24.399222413848896 24.15733535320365 25.91981801991186 33 24.869738842483923 24.242957208423245 24.893858504772698 25.993445444320134 34 25.681293634687645 24.377058232916685 24.89274192654346 25.048906205852205 35 26.134363315658604 24.119012456206427 24.99414987057806 24.752474357556913 36 24.763852309941782 24.83687038019134 24.67144864615449 25.727828663712387 37 26.047524365630675 24.494260353894905 24.511129328405076 24.94708595206934 38 25.130777576398405 24.184930384292368 24.96448728508478 25.719804754224445 39 25.974610435974334 24.200445061936836 24.177014441591687 25.647930060497142 40 25.98062700803258 24.489076212879393 24.703605926892706 24.82669085219532 41 24.8750560300297 25.017438223146932 25.097018842869023 25.010486903954344 42 26.30788384353665 24.893547212721298 24.484755325635714 24.313813618106337 43 25.652315652399547 23.993368526207984 24.855981480294048 25.498334341098417 44 25.197196506149833 24.622169246963285 24.355435222614442 25.82519902427244 45 25.341590676062197 24.935085636622187 24.453433944354323 25.269889742961293 46 25.15307993595152 24.579412201810232 24.58261822121654 25.68488964102171 47 25.35843434953278 24.435228633639362 25.046134817637505 25.16020219919035 48 26.259195004509483 25.047027485385374 23.846455784575465 24.847321725529678 49 25.293272156501306 25.06534221402163 24.120573051891142 25.52081257758592 50 25.477996519521362 25.117514094500272 24.205027038429087 25.199462347549286 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 35.0 1 32.5 2 30.0 3 100.0 4 170.0 5 210.0 6 250.0 7 220.5 8 191.0 9 248.0 10 305.0 11 506.0 12 707.0 13 1445.5 14 2184.0 15 2894.5 16 3605.0 17 3858.0 18 4111.0 19 4283.5 20 4456.0 21 5835.0 22 7214.0 23 8852.0 24 10490.0 25 14162.0 26 17834.0 27 22782.5 28 27731.0 29 32184.5 30 36638.0 31 41861.0 32 47084.0 33 54257.0 34 61430.0 35 71832.5 36 82235.0 37 98385.0 38 114535.0 39 126050.5 40 137566.0 41 150859.0 42 164152.0 43 170663.0 44 177174.0 45 194163.5 46 211153.0 47 226604.5 48 242056.0 49 252170.0 50 262284.0 51 253600.5 52 244917.0 53 244067.5 54 243218.0 55 247830.5 56 252443.0 57 246182.0 58 239921.0 59 220550.5 60 201180.0 61 177557.5 62 153935.0 63 133520.0 64 113105.0 65 96166.5 66 79228.0 67 69956.0 68 60684.0 69 56059.5 70 51435.0 71 40076.0 72 28717.0 73 25311.5 74 21906.0 75 16051.0 76 10196.0 77 9037.5 78 7879.0 79 6778.0 80 5677.0 81 4375.5 82 3074.0 83 2671.5 84 2269.0 85 1769.5 86 1270.0 87 880.5 88 491.0 89 319.5 90 148.0 91 110.5 92 73.0 93 64.5 94 56.0 95 46.5 96 37.0 97 39.0 98 41.0 99 29.0 100 17.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.031460325383658665 2 0.003984974548596765 3 2.3969771720882792E-4 4 0.0 5 0.0 6 1.1984885860441396E-4 7 0.0 8 0.0 9 0.0 10 2.996221465110349E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 4.494332197665524E-4 17 0.0 18 1.7977328790662095E-4 19 5.992442930220698E-5 20 1.4981107325551748E-4 21 2.996221465110349E-5 22 0.0 23 2.996221465110349E-5 24 8.689042248820014E-4 25 1.7977328790662095E-4 26 6.591687223242769E-4 27 4.7939543441765585E-4 28 0.0015280729472062781 29 6.591687223242769E-4 30 0.0013782618739507607 31 4.494332197665524E-4 32 8.689042248820014E-4 33 3.2958436116213845E-4 34 7.790175809286908E-4 35 1.1984885860441396E-4 36 2.0973550255772448E-4 37 0.0014681485179040713 38 0.0 39 7.190931516264838E-4 40 1.1984885860441396E-4 41 0.0012284508006952433 42 0.004254634480456696 43 0.0035655035434813153 44 0.0038950879046434537 45 0.00188761952301952 46 0.0019475439523217268 47 0.0010786397274397258 48 0.0038052012606901438 49 0.003235919182319177 50 0.0019475439523217268 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 3337537.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.1386184251077 #Duplication Level Percentage of deduplicated Percentage of total 1 74.8288393202344 36.02156943230459 2 14.393487965343946 13.857652499401441 3 4.665678788367071 6.737979926619637 4 1.945001763500442 3.745187909172374 5 1.053058267304341 2.5346385054584366 6 0.6338643844081047 1.8308013440572521 7 0.43464344482990713 1.4646194459148874 8 0.32156162489545354 1.238362588879988 9 0.23496901085149954 1.0179975199594795 >10 1.3098866913545217 11.418540314702867 >50 0.09091292223005747 3.013226667656323 >100 0.06962745756757895 6.952920230951287 >500 0.010955806254034445 3.646967928942456 >1k 0.007512552858656694 6.519535685979067 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 4961 0.14864254688412443 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 4223 0.12653043247161005 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 4128 0.12368402207975522 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 4097 0.12275519342557101 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 3983 0.1193395009553452 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 3973 0.11903987880883418 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 3832 0.1148152065430286 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 3724 0.1115792873607094 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 3619 0.10843325482234355 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.9962214651103494E-5 2 0.0 0.0 0.0 0.0 2.9962214651103494E-5 3 0.0 0.0 0.0 0.0 2.9962214651103494E-5 4 0.0 0.0 0.0 0.0 2.9962214651103494E-5 5 0.0 0.0 0.0 0.0 2.9962214651103494E-5 6 0.0 0.0 0.0 0.0 8.988664395331047E-5 7 0.0 0.0 0.0 0.0 8.988664395331047E-5 8 0.0 0.0 0.0 0.0 8.988664395331047E-5 9 0.0 0.0 0.0 0.0 1.1984885860441398E-4 10 0.0 0.0 0.0 0.0 1.1984885860441398E-4 11 0.0 0.0 0.0 0.0 1.1984885860441398E-4 12 0.0 0.0 0.0 0.0 4.793954344176559E-4 13 0.0 0.0 0.0 0.0 5.093576490687593E-4 14 0.0 0.0 0.0 0.0 5.393198637198629E-4 15 0.0 0.0 0.0 0.0 6.891309369753804E-4 16 0.0 0.0 0.0 0.0 7.190931516264838E-4 17 0.0 0.0 0.0 0.0 7.790175809286908E-4 18 0.0 0.0 0.0 0.0 7.790175809286908E-4 19 0.0 0.0 0.0 0.0 7.790175809286908E-4 20 0.0 0.0 0.0 0.0 8.389420102308978E-4 21 0.0 0.0 0.0 0.0 8.389420102308978E-4 22 0.0 0.0 0.0 0.0 8.689042248820014E-4 23 0.0 0.0 0.0 0.0 8.988664395331048E-4 24 0.0 0.0 0.0 0.0 9.288286541842082E-4 25 0.0 0.0 0.0 2.9962214651103494E-5 9.587908688353118E-4 26 0.0 0.0 0.0 8.988664395331047E-5 0.0010486775127886224 27 0.0 0.0 0.0 8.988664395331047E-5 0.0010486775127886224 28 0.0 0.0 0.0 2.0973550255772445E-4 0.0010786397274397258 29 0.0 0.0 0.0 3.595465758132419E-4 0.0010786397274397258 30 0.0 0.0 0.0 8.988664395331048E-4 0.0010786397274397258 31 0.0 0.0 0.0 0.0017977328790662096 0.0011685263713930361 32 0.0 0.0 0.0 0.0029962214651103494 0.0012584130153463467 33 0.0 0.0 0.0 0.004194710051154489 0.0012883752299974501 34 0.0 0.0 0.0 0.006232140647429526 0.0014082240886018641 35 0.0 0.0 0.0 0.008239609029053461 0.0014082240886018641 36 0.0 0.0 0.0 0.010996132776954982 0.0014082240886018641 37 0.0 0.0 0.0 0.014861258466947332 0.0014082240886018641 38 0.0 0.0 0.0 0.020793776967865826 0.0014082240886018641 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1420 0.0 27.118908 1 GTATCAA 3450 0.0 26.6612 1 GTATACG 45 0.0013968574 24.450064 1 TCAACGC 5190 0.0 17.506046 4 ATCAACG 5245 0.0 17.364418 3 CGCAATA 1065 0.0 17.35246 36 ACCGTCG 1140 0.0 17.174755 8 CAACGCA 5320 0.0 17.119617 5 CGTCGTA 1185 0.0 17.079744 10 AACGCAG 5365 0.0 16.976025 6 ATACCGT 1260 0.0 16.935833 6 TACGAAT 1115 0.0 16.772139 41 ACGGACC 1960 0.0 16.723824 8 AGCGAAA 1830 0.0 16.709717 17 GCGAAAG 1865 0.0 16.632046 18 GCGCAAT 1165 0.0 16.61811 35 GTCCTAC 755 0.0 16.613089 1 ATACGAA 1105 0.0 16.525715 40 GAGCGAA 1865 0.0 16.396374 16 CCGTCGT 1200 0.0 16.316015 9 >>END_MODULE