##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062131_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1433197 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.29993434259212 32.0 32.0 32.0 32.0 32.0 2 31.467159085596748 32.0 32.0 32.0 32.0 32.0 3 31.5870435118131 32.0 32.0 32.0 32.0 32.0 4 31.6576653453782 32.0 32.0 32.0 32.0 32.0 5 31.636819641682198 32.0 32.0 32.0 32.0 32.0 6 35.27996918776693 36.0 36.0 36.0 36.0 36.0 7 35.283084600372455 36.0 36.0 36.0 36.0 36.0 8 35.23924136039916 36.0 36.0 36.0 36.0 36.0 9 35.318803346643904 36.0 36.0 36.0 36.0 36.0 10 35.20168406715894 36.0 36.0 36.0 36.0 36.0 11 35.321837123577566 36.0 36.0 36.0 36.0 36.0 12 35.24519588025931 36.0 36.0 36.0 36.0 36.0 13 35.27953240203545 36.0 36.0 36.0 36.0 36.0 14 35.24067033352707 36.0 36.0 36.0 36.0 36.0 15 35.21780955444367 36.0 36.0 36.0 36.0 36.0 16 35.229430427219704 36.0 36.0 36.0 36.0 36.0 17 35.20900894992105 36.0 36.0 36.0 36.0 36.0 18 35.2086740343442 36.0 36.0 36.0 36.0 36.0 19 35.20030533136757 36.0 36.0 36.0 36.0 36.0 20 35.1991931325561 36.0 36.0 36.0 36.0 36.0 21 35.18680195395329 36.0 36.0 36.0 36.0 36.0 22 35.17230080721632 36.0 36.0 36.0 36.0 36.0 23 35.145077055003604 36.0 36.0 36.0 36.0 36.0 24 35.130591258563896 36.0 36.0 36.0 36.0 36.0 25 35.109981391253264 36.0 36.0 36.0 36.0 36.0 26 35.07327534177088 36.0 36.0 36.0 36.0 36.0 27 35.06138165234786 36.0 36.0 36.0 36.0 36.0 28 35.03278614175162 36.0 36.0 36.0 36.0 36.0 29 35.01583034293262 36.0 36.0 36.0 36.0 36.0 30 34.993580784776974 36.0 36.0 36.0 36.0 36.0 31 35.00495047087037 36.0 36.0 36.0 36.0 36.0 32 34.97778253792047 36.0 36.0 36.0 36.0 36.0 33 34.956555867755796 36.0 36.0 36.0 36.0 36.0 34 34.940336883205866 36.0 36.0 36.0 36.0 36.0 35 34.929863096280556 36.0 36.0 36.0 36.0 36.0 36 34.903390113152625 36.0 36.0 36.0 32.0 36.0 37 34.8963847956701 36.0 36.0 36.0 32.0 36.0 38 34.87964250553134 36.0 36.0 36.0 32.0 36.0 39 34.86589910528699 36.0 36.0 36.0 32.0 36.0 40 34.85367887317654 36.0 36.0 36.0 32.0 36.0 41 34.822959439630424 36.0 36.0 36.0 32.0 36.0 42 34.796589722138684 36.0 36.0 36.0 32.0 36.0 43 34.79637272475452 36.0 36.0 36.0 32.0 36.0 44 34.743465831982626 36.0 36.0 36.0 32.0 36.0 45 34.73540832139615 36.0 36.0 36.0 32.0 36.0 46 34.71575714992426 36.0 36.0 36.0 32.0 36.0 47 34.69505238986685 36.0 36.0 36.0 32.0 36.0 48 34.67064960364835 36.0 36.0 36.0 32.0 36.0 49 34.65113798033348 36.0 36.0 36.0 32.0 36.0 50 34.25721586076443 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 7.0 20 7.0 21 28.0 22 78.0 23 271.0 24 650.0 25 1550.0 26 3288.0 27 6267.0 28 10863.0 29 17131.0 30 25874.0 31 38285.0 32 58902.0 33 99708.0 34 229430.0 35 940857.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.06776466909514 17.864095153075645 11.900137011829921 26.168003165999288 2 16.361080002372404 19.738198158595257 37.08808250386388 26.81263933516846 3 18.668342181886434 23.1583927055082 28.32211477744418 29.851150335161194 4 12.616897746785682 15.874370376159035 35.14164486808164 36.36708700897364 5 14.76085615645034 36.57685341014069 33.11270754314135 15.549582890267628 6 35.34464232386917 34.8603401070056 16.232322724875033 13.562694844250192 7 31.079816661631305 29.963361631373775 20.001716442331375 18.955105264663548 8 28.36169765914944 33.26402441534555 18.786531090980514 19.587746834524495 9 27.15488519721992 14.208235155390362 18.496550020688012 40.14032962670171 10 16.542666500139198 26.596762343208923 30.836305127627256 26.024266029024623 11 37.60746080266704 21.09961156770493 21.812074683382676 19.480852946245353 12 24.577988929644704 23.500746931510463 28.457846339337856 23.463417799506978 13 29.51506317693939 19.219269925906907 25.06745409040069 26.198212806753013 14 23.601779797194663 19.38491358829247 24.838943983276547 32.17436263123632 15 25.296522390152926 27.116230357724724 21.857358060336438 25.729889191785915 16 26.041366491090844 25.72110168302994 23.326023294903884 24.91150853097533 17 24.329244339752314 25.938862556926928 24.82840809742136 24.903485005899398 18 25.031468219191844 24.942924604658693 25.81684798687126 24.208759189278197 19 25.8145949230985 24.87711040422217 24.970258799034607 24.338035873644724 20 25.853983582136415 24.407564916148882 24.70250035759265 25.03595114412205 21 26.64518555369569 24.20546512447347 24.44032467274213 24.709024649088715 22 26.084690381015314 24.193533757048055 24.86315558851993 24.858620273416705 23 24.59009416025035 24.242130345137962 25.464713454903205 25.703062039708485 24 24.99600538940999 24.675250369632305 25.280617033019553 25.048127207938148 25 25.149212595678172 24.285265735875914 25.207055589279857 25.35846607916606 26 24.711117065182428 25.27789348678092 25.417511807551392 24.59347764048527 27 25.285045747566095 24.722175899792838 24.923126087171912 25.06965226546915 28 24.90836791268629 24.525581976266714 25.430424853315397 25.135625257731597 29 24.725803401789157 24.7565739851115 25.377079194829427 25.14054341826991 30 24.756660354372297 24.92223597561231 25.513577480040915 24.807526189974478 31 25.42590364976542 24.592726146185985 24.712389442278333 25.268980761770266 32 25.24141982768485 24.69885318604398 24.54367466096562 25.516052325305544 33 24.864515993985467 24.455709097505924 25.067070426564424 25.61270448194419 34 25.36877602155197 24.69907974325751 25.296838444669117 24.635305790521407 35 25.83286003151004 24.43172382803724 25.350859688220854 24.384556452231866 36 24.67933533120057 24.978526997373002 25.061279169966404 25.280858501460024 37 25.71203696403166 24.773771836974777 24.78779662246882 24.72639457652474 38 25.03152043996743 24.552032972438543 25.17183611185343 25.244610475740597 39 25.631196400200672 24.471267263051473 24.61688637453068 25.28064996221718 40 25.71998328208413 24.716071038583078 25.04066095773563 24.52328472159716 41 24.7626948818568 25.090568080961447 25.3432237213015 24.803513315880256 42 25.900545099823326 25.075638531551874 24.94292221512045 24.080894153504353 43 25.38412265130455 24.20516964196001 25.18525806343571 25.22544964329973 44 24.85599711401121 24.94454449732788 24.867789476328404 25.331668912332507 45 25.074677062262634 25.10126146845003 24.84085988343331 24.983201585854026 46 24.877177778754632 24.85778020596315 24.934533191828738 25.330508823453478 47 25.184205752243262 24.79200100475865 25.223279699688806 24.800513543309286 48 25.870306214653787 25.15656126909699 24.22636927875407 24.74676323749516 49 25.054111572410427 25.384223563479047 24.464780378885674 25.09688448522485 50 25.221624555965917 25.38748101233143 24.477887085036148 24.913007346666507 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 201.0 1 122.5 2 44.0 3 136.5 4 229.0 5 238.0 6 247.0 7 194.5 8 142.0 9 190.5 10 239.0 11 447.5 12 656.0 13 1178.5 14 1701.0 15 2071.0 16 2441.0 17 2505.5 18 2570.0 19 2566.5 20 2563.0 21 3146.0 22 3729.0 23 4479.5 24 5230.0 25 6736.5 26 8243.0 27 10746.5 28 13250.0 29 15114.5 30 16979.0 31 19286.0 32 21593.0 33 25054.5 34 28516.0 35 33180.0 36 37844.0 37 44347.0 38 50850.0 39 56010.0 40 61170.0 41 66545.5 42 71921.0 43 74686.5 44 77452.0 45 84256.0 46 91060.0 47 97662.5 48 104265.0 49 108367.5 50 112470.0 51 109854.5 52 107239.0 53 107025.0 54 106811.0 55 107487.0 56 108163.0 57 104428.0 58 100693.0 59 92521.0 60 84349.0 61 74047.0 62 63745.0 63 54858.0 64 45971.0 65 38795.0 66 31619.0 67 27270.0 68 22921.0 69 20257.0 70 17593.0 71 13791.5 72 9990.0 73 8793.0 74 7596.0 75 5602.5 76 3609.0 77 3161.0 78 2713.0 79 2370.0 80 2027.0 81 1574.5 82 1122.0 83 933.5 84 745.0 85 578.5 86 412.0 87 279.5 88 147.0 89 96.5 90 46.0 91 37.5 92 29.0 93 22.0 94 15.0 95 19.0 96 23.0 97 16.0 98 9.0 99 7.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03307291321430341 2 0.0036282520825818084 3 4.186444710671318E-4 4 0.0 5 6.977407851118863E-5 6 6.977407851118863E-5 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 5.58192628089509E-4 17 0.0 18 3.4887039255594314E-4 19 0.0 20 1.3954815702237725E-4 21 0.0 22 0.0 23 1.3954815702237725E-4 24 0.001116385256179018 25 4.884185495783204E-4 26 2.790963140447545E-4 27 4.186444710671318E-4 28 0.0013954815702237726 29 6.977407851118863E-4 30 0.0010466111776678295 31 6.279667066006976E-4 32 6.279667066006976E-4 33 1.3954815702237725E-4 34 6.977407851118863E-4 35 2.093222355335659E-4 36 1.3954815702237725E-4 37 0.0013954815702237726 38 0.0 39 4.186444710671318E-4 40 2.790963140447545E-4 41 0.001465255648734961 42 0.00453531510322726 43 0.004256218789182506 44 0.004605089181738449 45 0.0018141260412909042 46 0.0019536741983132815 47 0.0011861593346902065 48 0.0036282520825818084 49 0.003279381690025865 50 0.002093222355335659 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1433197.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.83930559576648 #Duplication Level Percentage of deduplicated Percentage of total 1 75.28142492335022 40.53099642133004 2 14.610745205422976 15.732647521932948 3 4.569151785331234 7.379998778516709 4 1.8812123447993978 4.051326652887329 5 0.9857456574900009 2.6535930846651956 6 0.6040951006607055 1.9514436440026226 7 0.3720702177208725 1.4022401508470197 8 0.27662249389332416 1.1914530386708584 9 0.20577719138798065 0.9971010982598415 >10 1.0596945227364758 10.178835500771509 >50 0.0789891134098446 2.945468076364036 >100 0.06639943416178651 7.318626959732205 >500 0.006379491485820038 2.479273804629323 >1k 0.001692518149299194 1.1869952673902446 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1699 0.11854615939050947 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1524 0.10633569565105146 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1493 0.10417269921720461 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.3954815702237725E-4 2 0.0 0.0 0.0 0.0 1.3954815702237725E-4 3 0.0 0.0 0.0 0.0 1.3954815702237725E-4 4 0.0 0.0 0.0 0.0 1.3954815702237725E-4 5 0.0 0.0 0.0 0.0 1.3954815702237725E-4 6 0.0 0.0 0.0 0.0 2.0932223553356586E-4 7 0.0 0.0 0.0 6.977407851118863E-5 3.488703925559431E-4 8 0.0 0.0 0.0 6.977407851118863E-5 3.488703925559431E-4 9 0.0 0.0 0.0 6.977407851118863E-5 4.186444710671317E-4 10 0.0 0.0 0.0 6.977407851118863E-5 4.186444710671317E-4 11 0.0 0.0 0.0 6.977407851118863E-5 4.186444710671317E-4 12 0.0 0.0 0.0 6.977407851118863E-5 6.977407851118862E-4 13 0.0 0.0 0.0 6.977407851118863E-5 7.675148636230748E-4 14 0.0 0.0 0.0 6.977407851118863E-5 7.675148636230748E-4 15 0.0 0.0 0.0 1.3954815702237725E-4 7.675148636230748E-4 16 0.0 0.0 0.0 1.3954815702237725E-4 7.675148636230748E-4 17 0.0 0.0 0.0 2.0932223553356586E-4 9.070630206454521E-4 18 0.0 0.0 0.0 2.0932223553356586E-4 9.070630206454521E-4 19 0.0 0.0 0.0 2.0932223553356586E-4 9.070630206454521E-4 20 0.0 0.0 0.0 4.186444710671317E-4 9.070630206454521E-4 21 0.0 0.0 0.0 5.58192628089509E-4 9.768370991566407E-4 22 0.0 0.0 0.0 7.675148636230748E-4 9.768370991566407E-4 23 0.0 0.0 0.0 9.768370991566407E-4 9.768370991566407E-4 24 0.0 0.0 0.0 0.0010466111776678293 9.768370991566407E-4 25 0.0 0.0 0.0 0.0013954815702237723 9.768370991566407E-4 26 0.0 0.0 0.0 0.0015350297272461496 0.0012559334132013953 27 0.0 0.0 0.0 0.0017443519627797156 0.0012559334132013953 28 0.0 0.0 0.0 0.002372318669380413 0.0012559334132013953 29 0.0 0.0 0.0 0.0032096076115146767 0.0012559334132013953 30 0.0 0.0 0.0 0.004674863260249637 0.0012559334132013953 31 0.0 0.0 0.0 0.008442663499853823 0.0012559334132013953 32 0.0 0.0 0.0 0.01214068966094682 0.0013257074917125838 33 0.0 0.0 0.0 0.01521074911543912 0.0013257074917125838 34 0.0 0.0 0.0 0.018420356726953795 0.0013954815702237723 35 0.0 0.0 0.0 0.023095219987203434 0.0013954815702237723 36 0.0 0.0 0.0 0.029235338896188033 0.0013954815702237723 37 0.0 0.0 0.0 0.03886416173073206 0.0013954815702237723 38 0.0 0.0 0.0 0.05163281809827958 0.001465255648734961 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1560 0.0 26.5165 1 GGTATCA 745 0.0 21.855383 1 TAGGACG 215 0.0 21.487604 4 ACGCGAA 55 0.0044849366 19.999287 11 ACCGCGT 55 0.0044849366 19.999287 8 AGCGAAA 640 0.0 17.874363 17 ATCGATT 125 4.854064E-7 17.599985 29 ATGACCG 100 2.4842975E-5 17.599371 5 AGAGCGA 670 0.0 17.402365 15 TCAACGC 2340 0.0 17.392542 4 GTATTAC 165 1.6570993E-9 17.33574 1 CGGACCA 725 0.0 16.992498 9 CAACGCA 2385 0.0 16.97214 5 ACGGACC 690 0.0 16.897947 8 AAGACGG 705 0.0 16.850464 5 ATCAACG 2430 0.0 16.748375 3 AACGCAG 2420 0.0 16.726675 6 GCGAAAG 685 0.0 16.700132 18 ATACCGT 345 0.0 16.579119 6 TACCGTC 345 0.0 16.579119 7 >>END_MODULE