##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062130_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1133721 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.252832045979567 32.0 32.0 32.0 32.0 32.0 2 31.39603835511559 32.0 32.0 32.0 32.0 32.0 3 31.532206777505223 32.0 32.0 32.0 32.0 32.0 4 31.615722915955512 32.0 32.0 32.0 32.0 32.0 5 31.588208209956417 32.0 32.0 32.0 32.0 32.0 6 35.21656121744239 36.0 36.0 36.0 36.0 36.0 7 35.21447604833993 36.0 36.0 36.0 36.0 36.0 8 35.16391951811777 36.0 36.0 36.0 36.0 36.0 9 35.265151655477844 36.0 36.0 36.0 36.0 36.0 10 35.13508879168684 36.0 36.0 36.0 36.0 36.0 11 35.260781973695465 36.0 36.0 36.0 36.0 36.0 12 35.17365559956991 36.0 36.0 36.0 36.0 36.0 13 35.21256552538058 36.0 36.0 36.0 36.0 36.0 14 35.19001588574261 36.0 36.0 36.0 36.0 36.0 15 35.15723445186249 36.0 36.0 36.0 36.0 36.0 16 35.1683606460496 36.0 36.0 36.0 36.0 36.0 17 35.14198025792942 36.0 36.0 36.0 36.0 36.0 18 35.14397810396032 36.0 36.0 36.0 36.0 36.0 19 35.13845117096711 36.0 36.0 36.0 36.0 36.0 20 35.1329180636153 36.0 36.0 36.0 36.0 36.0 21 35.1278586177728 36.0 36.0 36.0 36.0 36.0 22 35.112218967453195 36.0 36.0 36.0 36.0 36.0 23 35.07572321585293 36.0 36.0 36.0 36.0 36.0 24 35.065449083151854 36.0 36.0 36.0 36.0 36.0 25 35.05199250962097 36.0 36.0 36.0 36.0 36.0 26 35.00323271774978 36.0 36.0 36.0 36.0 36.0 27 34.99534629772228 36.0 36.0 36.0 36.0 36.0 28 34.97096728383791 36.0 36.0 36.0 36.0 36.0 29 34.95009795178884 36.0 36.0 36.0 36.0 36.0 30 34.93763544999167 36.0 36.0 36.0 32.0 36.0 31 34.93822554226304 36.0 36.0 36.0 32.0 36.0 32 34.91150997467631 36.0 36.0 36.0 32.0 36.0 33 34.88735235565011 36.0 36.0 36.0 32.0 36.0 34 34.88120269449009 36.0 36.0 36.0 32.0 36.0 35 34.87067894129155 36.0 36.0 36.0 32.0 36.0 36 34.84624171202615 36.0 36.0 36.0 32.0 36.0 37 34.840932645686195 36.0 36.0 36.0 32.0 36.0 38 34.82227726221883 36.0 36.0 36.0 32.0 36.0 39 34.80647531447332 36.0 36.0 36.0 32.0 36.0 40 34.789256792455994 36.0 36.0 36.0 32.0 36.0 41 34.75724450724649 36.0 36.0 36.0 32.0 36.0 42 34.7354913598672 36.0 36.0 36.0 32.0 36.0 43 34.73594032394213 36.0 36.0 36.0 32.0 36.0 44 34.683438870762735 36.0 36.0 36.0 32.0 36.0 45 34.67788283007901 36.0 36.0 36.0 32.0 36.0 46 34.65385751873697 36.0 36.0 36.0 32.0 36.0 47 34.634256576353444 36.0 36.0 36.0 32.0 36.0 48 34.6183778901511 36.0 36.0 36.0 32.0 36.0 49 34.59590146076504 36.0 36.0 36.0 32.0 36.0 50 34.16740714867238 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 4.0 20 10.0 21 32.0 22 62.0 23 225.0 24 547.0 25 1207.0 26 2561.0 27 5138.0 28 8838.0 29 14452.0 30 22014.0 31 33202.0 32 50374.0 33 85811.0 34 194130.0 35 715113.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.565054430399854 17.97279627025148 12.383026256116693 26.079123043231977 2 16.292288951086704 19.61992098152972 36.98598961416087 27.101800453222708 3 18.341862791276135 23.07910785574543 28.70590393731069 29.87312541566774 4 12.843018696839875 15.810856462921654 34.86960195674244 36.476522883496024 5 14.944430723635465 36.363828811346714 32.9110362346964 15.780704230321419 6 35.2686730409625 34.72418233779064 16.17559891331193 13.83154570793494 7 31.118679110645388 29.96857251475451 19.942031593310876 18.970716781289223 8 28.353801332073765 33.35723692160593 18.56488501139169 19.724076734928612 9 26.95945475121304 14.456378597556188 18.577674754194373 40.0064918970364 10 16.777496403436118 26.579378877166427 30.610529398326396 26.032595321071057 11 37.20403873616172 21.261139204442717 21.64730123196095 19.887520827434617 12 24.31268363203998 23.57017290850218 28.385819791641858 23.73132366781598 13 29.449749982579487 19.329447015623774 25.07795127725428 26.14285172454246 14 23.574935985132146 19.314275734506108 24.81360052429125 32.29718775607049 15 25.267680496347865 27.107374742110274 21.787194556685463 25.8377502048564 16 25.999610131981793 25.766659580830137 23.228018985337613 25.005711301850464 17 24.348406706764717 26.17090095358558 24.729452837161876 24.751239502487827 18 24.99940461437093 25.212861388051184 25.572474308007543 24.215259689570342 19 25.752103030639812 24.999977948719305 25.096827173528585 24.151091847112298 20 26.002455641448126 24.298148742718634 24.688634543395345 25.010761072437894 21 26.651354257352562 24.185580050118148 24.49041695443588 24.67264873809341 22 26.032507115948277 24.11307543919536 24.839444625264946 25.01497281959142 23 24.771041148644418 24.213319173445978 25.38001039058179 25.63562928732781 24 24.887206306391334 24.811437170274154 25.098724802792958 25.20263172054155 25 25.101369916178523 24.354800439967928 25.112660191811198 25.43116945204235 26 24.84019408689455 25.10260479007585 25.344375458116165 24.71282566491344 27 25.349580802935485 24.64861098247796 24.901937435775302 25.09987077881125 28 24.997530210814148 24.632266031578016 25.28614271853224 25.084061039075596 29 24.91814528506257 24.915499119708993 25.22324815033042 24.943107444898015 30 24.87254078694818 24.871394095066048 25.34462501411313 24.911440103872643 31 25.375203864809297 24.530901450714772 24.73518523582164 25.35870944865429 32 25.197426857461913 24.726671964901108 24.605388851303374 25.470512326333605 33 24.79602511382901 24.4708119655858 25.099627949807623 25.633534970777568 34 25.491130022439563 24.48090873167083 25.20560777340277 24.82235347248684 35 25.76288677980454 24.46653494690047 25.16450269907914 24.606075574215854 36 24.707576934984658 24.95516958817765 24.944673141533556 25.39258033530414 37 25.698418634846487 24.682368590037612 24.807357123199704 24.811855651916197 38 24.937286102388597 24.48444060261793 25.27634689341284 25.301926401580637 39 25.611309377850144 24.543315157085473 24.616437655352232 25.22893780971215 40 25.651130790671417 24.667289983417422 24.993208199555443 24.688371026355714 41 24.771810730805463 25.103024764754238 25.27458569578763 24.850578808652667 42 25.73957424587111 24.958298747683386 24.816368943394796 24.485758063050707 43 25.330296609795727 24.338304174553972 25.00172006513313 25.329679150517165 44 25.036805340545325 24.777028880614854 24.80728467883426 25.378881100005557 45 25.177142000273445 25.031776624224328 24.77429996604025 25.01678140946198 46 25.061678846603364 24.822902103299388 24.834280825089643 25.28113822500761 47 25.114491562201202 24.803741351388542 25.046925663398333 25.034841423011923 48 25.741373394268013 25.241140963928753 24.289190974822546 24.72829466698069 49 25.15709900501023 25.23339919554019 24.380160186295956 25.229341613153622 50 25.144261386990983 25.289184321155574 24.596676739824964 24.96987755202848 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 82.0 1 59.0 2 36.0 3 91.5 4 147.0 5 160.5 6 174.0 7 138.0 8 102.0 9 140.0 10 178.0 11 307.5 12 437.0 13 880.5 14 1324.0 15 1617.0 16 1910.0 17 1930.0 18 1950.0 19 1924.0 20 1898.0 21 2403.0 22 2908.0 23 3670.5 24 4433.0 25 5522.5 26 6612.0 27 8334.0 28 10056.0 29 11696.0 30 13336.0 31 15183.5 32 17031.0 33 19491.5 34 21952.0 35 25298.5 36 28645.0 37 33788.0 38 38931.0 39 43324.0 40 47717.0 41 52424.5 42 57132.0 43 59961.5 44 62791.0 45 67853.0 46 72915.0 47 77634.0 48 82353.0 49 85739.0 50 89125.0 51 87792.5 52 86460.0 53 85841.0 54 85222.0 55 85084.5 56 84947.0 57 81988.0 58 79029.0 59 73091.0 60 67153.0 61 58633.0 62 50113.0 63 43559.0 64 37005.0 65 30932.5 66 24860.0 67 21675.5 68 18491.0 69 16277.5 70 14064.0 71 10974.0 72 7884.0 73 6909.0 74 5934.0 75 4407.5 76 2881.0 77 2536.5 78 2192.0 79 1841.0 80 1490.0 81 1164.5 82 839.0 83 666.0 84 493.0 85 402.5 86 312.0 87 198.0 88 84.0 89 55.5 90 27.0 91 22.5 92 18.0 93 15.0 94 12.0 95 14.0 96 16.0 97 14.5 98 13.0 99 10.0 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.030607177603660867 2 0.0054687176121814805 3 2.6461536833136194E-4 4 0.0 5 8.820512277712065E-5 6 8.820512277712065E-5 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 3.528204911084826E-4 17 0.0 18 1.764102455542413E-4 19 0.0 20 4.4102561388560327E-4 21 0.0 22 0.0 23 1.764102455542413E-4 24 0.001234871718879689 25 1.764102455542413E-4 26 1.764102455542413E-4 27 5.292307366627239E-4 28 0.0018523075783195338 29 4.4102561388560327E-4 30 0.002205128069428016 31 3.528204911084826E-4 32 8.820512277712065E-4 33 2.6461536833136194E-4 34 7.938461049940858E-4 35 8.820512277712065E-5 36 3.528204911084826E-4 37 0.001499487087211051 38 8.820512277712065E-5 39 6.174358594398445E-4 40 8.820512277712065E-5 41 0.0011466665961025685 42 0.0054687176121814805 43 0.0037928202794161882 44 0.004763076629964515 45 0.002293333192205137 46 0.002293333192205137 47 0.0011466665961025685 48 0.004233845893301791 49 0.0036164100338619467 50 0.0013230768416568099 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1133721.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.075514596755795 #Duplication Level Percentage of deduplicated Percentage of total 1 80.49851266917696 49.96986598212626 2 12.117541010742482 15.044051877782639 3 3.3185547137455202 6.180029747197284 4 1.3396387961657688 3.326350705830741 5 0.7084245675737401 2.1987909792562053 6 0.4577137434824956 1.7047689698810036 7 0.29098873579601126 1.2644292861477768 8 0.22733280060528166 1.1289440465835627 9 0.15661290664464442 0.874964409521398 >10 0.782807372836115 8.533301455259657 >50 0.05302843085192444 2.2981532919432976 >100 0.04441685316176307 5.56439753705578 >500 0.004284579887637339 1.8199269559453082 >1k 1.4281932958791127E-4 0.09202475546917527 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 8.820512277712065E-5 0.0 0.0 8.820512277712065E-5 14 0.0 8.820512277712065E-5 0.0 0.0 8.820512277712065E-5 15 0.0 8.820512277712065E-5 0.0 0.0 8.820512277712065E-5 16 0.0 8.820512277712065E-5 0.0 0.0 8.820512277712065E-5 17 0.0 8.820512277712065E-5 0.0 0.0 8.820512277712065E-5 18 0.0 8.820512277712065E-5 0.0 0.0 8.820512277712065E-5 19 0.0 8.820512277712065E-5 0.0 0.0 8.820512277712065E-5 20 0.0 8.820512277712065E-5 0.0 0.0 1.764102455542413E-4 21 0.0 8.820512277712065E-5 0.0 0.0 1.764102455542413E-4 22 0.0 8.820512277712065E-5 0.0 0.0 1.764102455542413E-4 23 0.0 8.820512277712065E-5 0.0 8.820512277712065E-5 1.764102455542413E-4 24 0.0 8.820512277712065E-5 0.0 4.4102561388560327E-4 1.764102455542413E-4 25 0.0 8.820512277712065E-5 0.0 7.938461049940859E-4 1.764102455542413E-4 26 0.0 8.820512277712065E-5 0.0 9.702563505483272E-4 1.764102455542413E-4 27 0.0 8.820512277712065E-5 0.0 0.001234871718879689 1.764102455542413E-4 28 0.0 8.820512277712065E-5 0.0 0.0013230768416568096 1.764102455542413E-4 29 0.0 8.820512277712065E-5 0.0 0.0019405127010966544 1.764102455542413E-4 30 0.0 8.820512277712065E-5 0.0 0.0031753844199763435 1.764102455542413E-4 31 0.0 8.820512277712065E-5 0.0 0.0052923073666272386 1.764102455542413E-4 32 0.0 8.820512277712065E-5 0.0 0.007673845681609497 1.764102455542413E-4 33 0.0 8.820512277712065E-5 0.0 0.010408204487700237 2.6461536833136194E-4 34 0.0 8.820512277712065E-5 0.0 0.01358358890767658 3.528204911084826E-4 35 8.820512277712065E-5 8.820512277712065E-5 0.0 0.018170255292086854 3.528204911084826E-4 36 8.820512277712065E-5 8.820512277712065E-5 0.0 0.0243446138864853 3.528204911084826E-4 37 8.820512277712065E-5 8.820512277712065E-5 0.0 0.03157743395420919 3.528204911084826E-4 38 8.820512277712065E-5 8.820512277712065E-5 0.0 0.042955894792457754 3.528204911084826E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 545 0.0 28.669401 1 GTATCAA 1300 0.0 27.085287 1 TATAGGA 140 7.2759576E-12 22.00194 2 TAGGACG 80 3.6165984E-6 21.999031 4 CGTCTTA 55 0.0044834428 20.0 15 TACTACG 60 0.0074137123 18.332523 7 TCAACGC 1940 0.0 17.803337 4 GTATAGG 175 1.9099389E-10 17.605436 1 TCTAGAT 250 0.0 17.601553 2 TCTATAC 175 1.9099389E-10 17.599224 3 ATCAACG 1960 0.0 17.509432 3 TCTAGCG 240 0.0 17.416666 28 CAACGCA 2005 0.0 17.335894 5 TCGTTTA 220 1.8189894E-12 16.99925 30 CGCAATA 260 0.0 16.923079 36 AACGCAG 2065 0.0 16.832188 6 TATCAAC 2090 0.0 16.527775 2 TATAACC 120 6.408518E-6 16.499271 3 GGCGTTA 310 0.0 16.32258 42 CGAGCCG 355 0.0 16.112677 15 >>END_MODULE