##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062129_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1219907 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.227282899434137 32.0 32.0 32.0 32.0 32.0 2 31.38970347739623 32.0 32.0 32.0 32.0 32.0 3 31.532429111399477 32.0 32.0 32.0 32.0 32.0 4 31.615961708556473 32.0 32.0 32.0 32.0 32.0 5 31.593358346169012 32.0 32.0 32.0 32.0 32.0 6 35.21504754050923 36.0 36.0 36.0 36.0 36.0 7 35.21611319551408 36.0 36.0 36.0 36.0 36.0 8 35.17200737433264 36.0 36.0 36.0 36.0 36.0 9 35.258118856601364 36.0 36.0 36.0 36.0 36.0 10 35.137137503104746 36.0 36.0 36.0 36.0 36.0 11 35.260746925790244 36.0 36.0 36.0 36.0 36.0 12 35.18105396558918 36.0 36.0 36.0 36.0 36.0 13 35.21622467942228 36.0 36.0 36.0 36.0 36.0 14 35.180797388653396 36.0 36.0 36.0 36.0 36.0 15 35.15899572672343 36.0 36.0 36.0 36.0 36.0 16 35.17471741698343 36.0 36.0 36.0 36.0 36.0 17 35.15702016629137 36.0 36.0 36.0 36.0 36.0 18 35.15354695071018 36.0 36.0 36.0 36.0 36.0 19 35.14203869639243 36.0 36.0 36.0 36.0 36.0 20 35.137703939726556 36.0 36.0 36.0 36.0 36.0 21 35.12960742089356 36.0 36.0 36.0 36.0 36.0 22 35.10589085889334 36.0 36.0 36.0 36.0 36.0 23 35.08404984970166 36.0 36.0 36.0 36.0 36.0 24 35.0640368487106 36.0 36.0 36.0 36.0 36.0 25 35.051750666239315 36.0 36.0 36.0 36.0 36.0 26 35.01250423187997 36.0 36.0 36.0 36.0 36.0 27 34.997282579737636 36.0 36.0 36.0 36.0 36.0 28 34.978023734596164 36.0 36.0 36.0 36.0 36.0 29 34.962319258763166 36.0 36.0 36.0 36.0 36.0 30 34.9356114851378 36.0 36.0 36.0 36.0 36.0 31 34.930571756699486 36.0 36.0 36.0 36.0 36.0 32 34.9046050231698 36.0 36.0 36.0 32.0 36.0 33 34.87946950054389 36.0 36.0 36.0 32.0 36.0 34 34.86086890230157 36.0 36.0 36.0 32.0 36.0 35 34.84137561305903 36.0 36.0 36.0 32.0 36.0 36 34.81826073626924 36.0 36.0 36.0 32.0 36.0 37 34.80662542308553 36.0 36.0 36.0 32.0 36.0 38 34.7932137449822 36.0 36.0 36.0 32.0 36.0 39 34.763744285425034 36.0 36.0 36.0 32.0 36.0 40 34.758810302752586 36.0 36.0 36.0 32.0 36.0 41 34.722664924457355 36.0 36.0 36.0 32.0 36.0 42 34.708576965293254 36.0 36.0 36.0 32.0 36.0 43 34.68508419084406 36.0 36.0 36.0 32.0 36.0 44 34.65747388940304 36.0 36.0 36.0 32.0 36.0 45 34.62882990260733 36.0 36.0 36.0 32.0 36.0 46 34.604310820415 36.0 36.0 36.0 32.0 36.0 47 34.56603659131393 36.0 36.0 36.0 32.0 36.0 48 34.54563175717493 36.0 36.0 36.0 32.0 36.0 49 34.53053552442932 36.0 36.0 36.0 32.0 36.0 50 34.10907880682708 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 7.0 19 8.0 20 30.0 21 56.0 22 108.0 23 289.0 24 689.0 25 1530.0 26 3181.0 27 6091.0 28 10333.0 29 16299.0 30 24753.0 31 36332.0 32 54061.0 33 90275.0 34 201612.0 35 774252.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.140917436007186 17.441419014046975 11.812790117018476 26.604873432927363 2 15.865397227213704 20.058269172754816 37.33465261473485 26.74168098529662 3 18.531898463974976 23.817241057068518 28.501797685387842 29.149062793568664 4 12.557760550599347 15.958019750685912 35.864701161645925 35.619518537068814 5 14.312320529351826 36.73517735368352 33.79249401798662 15.160008098978036 6 34.369451416748504 35.32911552201563 16.700631032227072 13.600802029008793 7 30.102130736195466 30.336656810724094 20.705430823825093 18.855781629255343 8 27.73350755426438 33.576657892773795 19.28269941889013 19.407135134071694 9 27.25879923633523 14.40511448823558 18.297460380176524 40.03862589525267 10 15.246105229505577 27.51902812104221 32.54507523126801 24.689791418184203 11 36.51032414766044 21.452291035300235 22.57631114502991 19.461073672009423 12 24.254635804204746 23.48154408491795 29.56749981760905 22.696320293268258 13 29.596600396587608 19.949963398849256 25.12322660661837 25.330209597944766 14 23.124713605217448 19.147689127121986 26.017147208762637 31.710450058897933 15 24.956000744319034 27.152397682774176 22.6213965490812 25.270205023825586 16 25.146138907993354 26.07891951887899 24.03203210752348 24.742909465604175 17 23.756892943478476 25.933616251074877 25.734994552863455 24.574496252583188 18 24.163580353175913 25.652388470549276 26.274487622776256 23.909543553498562 19 25.07387858254769 25.28873102621757 26.066577206295232 23.570813184939507 20 25.34088803854736 24.884293984270865 25.87019285155693 23.904625125624847 21 25.285062947473 24.70149339375329 25.665256175475815 24.34818748329789 22 25.137162095143317 24.736557786782107 25.569080265954703 24.557199852119872 23 24.510413097402587 24.884294363664086 25.49073453200493 25.1145580069284 24 24.380806856989214 25.048979665446343 25.865771944119736 24.704441533444708 25 24.697353234352867 24.629642988300716 25.94679581344106 24.726207963905356 26 24.40302581682791 25.034879851004426 25.993891312580846 24.56820301958682 27 24.577855780336634 25.26307419524339 25.576787662625634 24.582282361794338 28 24.64484386245928 24.938887732132347 25.716911252362927 24.699357153045447 29 24.453439702533483 25.299737192003946 25.701818670680105 24.545004434782467 30 24.689070835778907 25.13812698173281 25.69752076413322 24.47528141835507 31 24.658046302080002 24.836913129087417 25.80190867791019 24.703131890922386 32 24.45688082118341 25.26416142989004 25.770351291665367 24.50860645726118 33 24.50078038927653 25.052217223650388 25.623327737264574 24.82367464980851 34 24.528158045741456 25.111074678252315 25.876137388310518 24.484629887695714 35 24.714833884333427 25.084781330974675 25.774918169723332 24.425466614968567 36 24.640115418823598 25.123595689828303 25.784794717621455 24.451494173726644 37 25.076195394666733 24.969546434514587 25.490658993843706 24.463599176974974 38 24.682003926535263 25.152532369323843 25.624372389653296 24.541091314487602 39 24.740305730980346 25.286417858571554 25.412986025038197 24.560290385409903 40 24.825253072570284 25.128308961256884 25.60924726229131 24.437190703881527 41 24.4598702180193 25.22575769002502 25.78318408514852 24.53118800680716 42 24.735190029487548 25.326334584046883 25.51103139189908 24.427443994566485 43 24.559108157759475 25.04236152270307 25.627102193125918 24.77142812641154 44 24.467740626488403 25.343342238821755 25.617884865888918 24.571032268800924 45 24.671117348477893 25.257974502577284 25.405365082696118 24.665543066248706 46 24.71839466308599 25.265743133961426 25.33337268143368 24.682489521518903 47 24.702495374609494 25.45395225990391 25.430097786944305 24.413454578542286 48 24.660534815470626 25.565474726607974 25.228058957585297 24.545931500336103 49 24.731954968270713 25.390641971847383 25.21348918843367 24.663913871448234 50 24.536044613822057 25.687786859645655 25.16380561869872 24.612362907833568 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 141.0 1 113.5 2 86.0 3 299.5 4 513.0 5 471.0 6 429.0 7 358.5 8 288.0 9 378.5 10 469.0 11 691.0 12 913.0 13 1636.0 14 2359.0 15 2980.5 16 3602.0 17 3515.0 18 3428.0 19 3382.5 20 3337.0 21 3869.5 22 4402.0 23 5111.0 24 5820.0 25 7194.5 26 8569.0 27 10546.5 28 12524.0 29 14847.5 30 17171.0 31 19855.0 32 22539.0 33 25976.0 34 29413.0 35 32843.0 36 36273.0 37 40238.5 38 44204.0 39 48696.0 40 53188.0 41 58139.5 42 63091.0 43 66763.5 44 70436.0 45 75614.0 46 80792.0 47 84098.5 48 87405.0 49 89483.5 50 91562.0 51 92616.0 52 93670.0 53 93304.5 54 92939.0 55 89905.0 56 86871.0 57 82597.0 58 78323.0 59 71933.5 60 65544.0 61 58126.0 62 50708.0 63 43863.0 64 37018.0 65 31136.0 66 25254.0 67 21128.5 68 17003.0 69 13931.5 70 10860.0 71 8881.5 72 6903.0 73 5847.0 74 4791.0 75 3833.5 76 2876.0 77 2390.5 78 1905.0 79 1495.5 80 1086.0 81 855.0 82 624.0 83 462.0 84 300.0 85 230.0 86 160.0 87 98.0 88 36.0 89 30.0 90 24.0 91 18.5 92 13.0 93 12.0 94 11.0 95 15.0 96 19.0 97 14.5 98 10.0 99 7.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.029182552440472923 2 0.00418064655748348 3 4.0986730955720394E-4 4 0.0 5 0.0 6 8.197346191144079E-5 7 0.0 8 0.0 9 0.0 10 1.6394692382288157E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 4.918407714686447E-4 17 0.0 18 4.0986730955720394E-4 19 0.0 20 4.0986730955720394E-4 21 8.197346191144079E-5 22 0.0 23 8.197346191144079E-5 24 0.0010656550048487301 25 2.4592038573432236E-4 26 4.0986730955720394E-4 27 3.2789384764576315E-4 28 0.0017214427001402566 29 4.0986730955720394E-4 30 0.001229601928671612 31 4.0986730955720394E-4 32 7.377611572029671E-4 33 2.4592038573432236E-4 34 5.738142333800855E-4 35 3.2789384764576315E-4 36 1.6394692382288157E-4 37 0.0013935488524944935 38 1.6394692382288157E-4 39 9.017080810258488E-4 40 0.0 41 0.001229601928671612 42 0.005738142333800856 43 0.00409867309557204 44 0.004918407714686448 45 0.0015574957763173749 46 0.0021313100096974603 47 8.197346191144079E-4 48 0.0038527527098377173 49 0.004590513867040684 50 0.0013115753905830526 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1219907.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.96772278196726 #Duplication Level Percentage of deduplicated Percentage of total 1 72.97210464263424 43.02998837383562 2 15.535993490917996 18.322443146298003 3 5.202549515769209 9.203474928160102 4 2.280272763881079 5.37849968831239 5 1.192767367662126 3.516738773983853 6 0.7019915016935692 2.4836904160297975 7 0.45626567077756497 1.8833463312537855 8 0.2933094494138207 1.3836632241892504 9 0.2276274634128494 1.208040584408217 >10 1.084713384451264 10.971657165140893 >50 0.04233477426024247 1.688663227373826 >100 0.009650397441298607 0.7421707914690924 >500 2.7971845649450423E-4 0.09640953653547318 >1k 1.3985922824725212E-4 0.09121381300960936 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.197346191144079E-5 2 0.0 0.0 0.0 0.0 1.6394692382288157E-4 3 0.0 0.0 0.0 0.0 1.6394692382288157E-4 4 0.0 0.0 0.0 0.0 1.6394692382288157E-4 5 0.0 0.0 0.0 0.0 1.6394692382288157E-4 6 0.0 0.0 0.0 0.0 3.2789384764576315E-4 7 0.0 0.0 0.0 0.0 3.2789384764576315E-4 8 0.0 0.0 0.0 0.0 3.2789384764576315E-4 9 0.0 0.0 0.0 0.0 4.0986730955720394E-4 10 0.0 0.0 0.0 0.0 4.0986730955720394E-4 11 0.0 0.0 0.0 0.0 4.0986730955720394E-4 12 0.0 0.0 0.0 0.0 0.0010656550048487303 13 0.0 0.0 0.0 0.0 0.001229601928671612 14 0.0 0.0 0.0 0.0 0.001229601928671612 15 0.0 0.0 0.0 0.0 0.0013935488524944935 16 0.0 0.0 0.0 8.197346191144079E-5 0.0014755223144059342 17 0.0 0.0 0.0 1.6394692382288157E-4 0.0014755223144059342 18 0.0 0.0 0.0 1.6394692382288157E-4 0.0016394692382288157 19 0.0 0.0 0.0 2.4592038573432236E-4 0.0016394692382288157 20 0.0 0.0 0.0 4.918407714686447E-4 0.001967363085874579 21 0.0 0.0 0.0 5.738142333800855E-4 0.00204933654778602 22 0.0 0.0 0.0 8.197346191144079E-4 0.00204933654778602 23 0.0 0.0 0.0 0.001229601928671612 0.00204933654778602 24 0.0 0.0 0.0 0.001557495776317375 0.00204933654778602 25 0.0 0.0 0.0 0.002459203857343224 0.00204933654778602 26 0.0 0.0 0.0 0.0029510446288118683 0.0021313100096974607 27 0.0 0.0 0.0 0.0037707792479262764 0.002377230395431783 28 0.0 0.0 0.0 0.004426566943217802 0.002459203857343224 29 0.0 0.0 0.0 0.0056561688718894144 0.002459203857343224 30 0.0 0.0 0.0 0.00827931965305552 0.002459203857343224 31 0.0 0.0 0.0 0.012459966210539 0.0025411773192546643 32 0.0 0.0 0.0 0.01762429431095977 0.002705124243077546 33 0.0 0.0 0.0 0.023198489720937743 0.002705124243077546 34 0.0 0.0 0.0 0.029510446288118684 0.0029510446288118683 35 0.0 0.0 0.0 0.03836358017455429 0.0029510446288118683 36 0.0 0.0 0.0 0.04779052829436998 0.0029510446288118683 37 0.0 0.0 0.0 0.06197193720504924 0.0029510446288118683 38 0.0 0.0 0.0 0.08246530268290944 0.0032789384764576315 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTTCGT 45 0.0013981451 24.444672 42 TTAACGG 95 2.6862836E-8 23.157162 35 GTATCAA 1790 0.0 21.514753 1 TAACGGC 105 7.745439E-8 20.952578 36 CGTCGTA 95 6.8657937E-7 20.842299 10 ATACGAT 75 5.4740227E-5 20.532684 6 TAGTGCG 55 0.004484456 19.999369 8 GTATAGG 170 5.456968E-12 19.417517 1 GTATATA 185 1.8189894E-12 19.032665 1 CCGTCGT 95 1.5975655E-5 18.525728 9 CGCGGTA 125 4.850008E-7 17.600885 43 ACTAGAC 115 4.2742395E-6 17.216846 3 TAAGACC 260 0.0 16.92254 4 AATACGA 130 7.3193587E-7 16.92254 5 GTATTAG 235 0.0 16.856058 1 CCCGACA 120 6.4085616E-6 16.499477 21 TTATTCC 295 0.0 16.40626 4 GGTATCA 1050 0.0 16.138115 1 TATAGTG 150 1.8382707E-7 16.132822 5 GTATTAC 165 3.0990122E-8 16.004742 1 >>END_MODULE