##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062127_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1768607 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.283036310497472 32.0 32.0 32.0 32.0 32.0 2 31.44812668953589 32.0 32.0 32.0 32.0 32.0 3 31.576019432242436 32.0 32.0 32.0 32.0 32.0 4 31.656155381042822 32.0 32.0 32.0 32.0 32.0 5 31.62126577583375 32.0 32.0 32.0 32.0 32.0 6 35.27471281070356 36.0 36.0 36.0 36.0 36.0 7 35.27394327852372 36.0 36.0 36.0 36.0 36.0 8 35.230566768083584 36.0 36.0 36.0 36.0 36.0 9 35.318139643233344 36.0 36.0 36.0 36.0 36.0 10 35.1869171613592 36.0 36.0 36.0 36.0 36.0 11 35.316292992168414 36.0 36.0 36.0 36.0 36.0 12 35.22869636951567 36.0 36.0 36.0 36.0 36.0 13 35.27260097918871 36.0 36.0 36.0 36.0 36.0 14 35.23436071439274 36.0 36.0 36.0 36.0 36.0 15 35.209554185864924 36.0 36.0 36.0 36.0 36.0 16 35.21895650079413 36.0 36.0 36.0 36.0 36.0 17 35.19780821855845 36.0 36.0 36.0 36.0 36.0 18 35.202195287025326 36.0 36.0 36.0 36.0 36.0 19 35.18716820639068 36.0 36.0 36.0 36.0 36.0 20 35.18243171037998 36.0 36.0 36.0 36.0 36.0 21 35.17101877353194 36.0 36.0 36.0 36.0 36.0 22 35.153898520134774 36.0 36.0 36.0 36.0 36.0 23 35.118370559428975 36.0 36.0 36.0 36.0 36.0 24 35.11079114806172 36.0 36.0 36.0 36.0 36.0 25 35.08332263753338 36.0 36.0 36.0 36.0 36.0 26 35.04478609436692 36.0 36.0 36.0 36.0 36.0 27 35.03255386866613 36.0 36.0 36.0 36.0 36.0 28 35.007994992669374 36.0 36.0 36.0 36.0 36.0 29 34.98544278067428 36.0 36.0 36.0 36.0 36.0 30 34.961183010131705 36.0 36.0 36.0 36.0 36.0 31 34.96230253527211 36.0 36.0 36.0 36.0 36.0 32 34.933610462923646 36.0 36.0 36.0 36.0 36.0 33 34.923226019121266 36.0 36.0 36.0 32.0 36.0 34 34.908724776052566 36.0 36.0 36.0 32.0 36.0 35 34.893367492043176 36.0 36.0 36.0 32.0 36.0 36 34.868161779298624 36.0 36.0 36.0 32.0 36.0 37 34.85101268964784 36.0 36.0 36.0 32.0 36.0 38 34.82317213490617 36.0 36.0 36.0 32.0 36.0 39 34.79318695447886 36.0 36.0 36.0 32.0 36.0 40 34.7938569733129 36.0 36.0 36.0 32.0 36.0 41 34.767519296259714 36.0 36.0 36.0 32.0 36.0 42 34.736956825343334 36.0 36.0 36.0 32.0 36.0 43 34.737048422854826 36.0 36.0 36.0 32.0 36.0 44 34.68406604745995 36.0 36.0 36.0 32.0 36.0 45 34.67439007082975 36.0 36.0 36.0 32.0 36.0 46 34.641884262586316 36.0 36.0 36.0 32.0 36.0 47 34.62503823630688 36.0 36.0 36.0 32.0 36.0 48 34.59139537500417 36.0 36.0 36.0 32.0 36.0 49 34.5733467073239 36.0 36.0 36.0 32.0 36.0 50 34.1645679339729 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 3.0 19 2.0 20 18.0 21 39.0 22 122.0 23 325.0 24 770.0 25 1859.0 26 4214.0 27 7914.0 28 13797.0 29 21923.0 30 32973.0 31 48998.0 32 74689.0 33 128403.0 34 296319.0 35 1136239.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.81370647089764 17.88882793102083 12.02548541630139 26.271980181780137 2 16.048559691723987 19.87752644122711 37.47673935353638 26.597174513512524 3 18.835304102286614 23.355209405863057 28.219398518262196 29.590087973588137 4 12.47258435593662 15.90387236961066 35.48170961666442 36.141833657788304 5 14.594084497008097 36.805972157749004 33.09700798424975 15.502935360993142 6 35.0718221423099 35.26802197211927 16.29521572086475 13.364940164706082 7 30.706143309395472 29.89799316637331 20.28302500216272 19.112838522068497 8 27.959122631539962 33.64919397016975 18.98081371384372 19.41086968444657 9 27.04970635081734 14.267952122772328 18.502075362135283 40.18026616427505 10 16.415263111470967 26.73034777711687 30.74967601565981 26.10471309575236 11 37.746203650669706 21.01823638603715 21.956036586986254 19.27952337630689 12 24.57951370768068 23.46456844284796 28.67957663856357 23.276341210907795 13 29.527814828280107 19.346129467993737 25.10783910727482 26.01821659645133 14 23.48814632080502 19.81429452670944 24.69423676373553 32.003322388750014 15 25.098735897799795 27.67517034592761 21.717034932011465 25.50905882426113 16 25.79351078482593 25.639659933642278 23.883521165941797 24.683308115589995 17 24.08771422933416 26.18693695094501 24.97287413201463 24.7524746877062 18 24.889870954937983 24.99074130092214 26.301546923652342 23.817840820487536 19 25.809196621519998 24.77906328486955 24.93709735237809 24.474642741232362 20 25.84210579881737 24.578621985048077 24.617126973734056 24.962145242400492 21 26.77779744171543 24.224658163175878 24.324171508989846 24.673372886118848 22 25.97722388297683 24.53071824322758 24.866688868697228 24.625369005098364 23 24.48069270374521 24.559681466646612 25.50211861771361 25.457507211894566 24 24.99024648958438 24.925166544724227 25.274483572826778 24.810103392864615 25 24.947769510738134 24.520313490364995 25.394053951056282 25.137863047840586 26 24.381644022591868 25.702801253646246 25.64846452082748 24.267090202934412 27 25.087739038345084 24.834261281682597 25.178997815782793 24.899001864189525 28 24.653168078345338 24.846034671883658 25.53856766445397 24.962229585317033 29 24.456844703808265 24.80876127515477 25.404034035941404 25.330359985095562 30 24.403054191314418 25.17434832120123 25.781782734908 24.64081475257635 31 25.320691326082027 24.813963126787783 24.783882854301226 25.081462692828964 32 25.022517874357895 24.918876283151313 24.740259923837847 25.31834591865294 33 24.459954506414956 24.653158061088963 25.488507583112302 25.39837984938378 34 25.252984444644227 24.966314916936515 25.49051870221821 24.290181936201048 35 25.5482566495873 24.571385599732217 25.697639836119517 24.182717914560957 36 24.188598251956623 25.416457933536357 25.161398298999327 25.233545515507693 37 25.371316519768488 25.132479763334487 24.936898243328514 24.559305473568507 38 24.768306356358423 24.79572906813102 25.20045436889032 25.235510206620237 39 25.57011195295714 24.52725319461721 24.732387198914395 25.17024765351125 40 25.78985935816117 24.87563651825223 25.169031429272547 24.16547269431405 41 24.504208446747853 25.164170699078248 25.903744573348426 24.427876280825473 42 25.832527579402104 25.519329612729212 24.943031783458576 23.7051110244101 43 25.12856671927135 24.445120458322332 25.3596616864674 25.066651135938915 44 24.483525282042468 25.166183402241867 25.06202898681842 25.288262328897254 45 24.79429638961327 25.394161590985682 25.012382927618116 24.799159091782936 46 24.558613073930225 25.006375196274057 25.038943826463484 25.396067903332238 47 24.95117568498224 24.928558746931166 25.381745643129594 24.738519924957 48 25.671170539514815 25.304542925511946 24.337367518738493 24.68691901623475 49 24.850894969443928 25.58143611270689 24.59198259366985 24.97568632417933 50 25.0627619321176 25.804370492166633 24.484334395574322 24.648533180141445 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 335.0 1 196.0 2 57.0 3 157.5 4 258.0 5 248.0 6 238.0 7 205.5 8 173.0 9 235.5 10 298.0 11 481.0 12 664.0 13 1213.0 14 1762.0 15 2300.5 16 2839.0 17 2865.5 18 2892.0 19 2962.5 20 3033.0 21 3701.5 22 4370.0 23 5319.5 24 6269.0 25 8328.0 26 10387.0 27 13959.0 28 17531.0 29 21107.0 30 24683.0 31 27678.0 32 30673.0 33 35578.5 34 40484.0 35 46750.0 36 53016.0 37 61486.5 38 69957.0 39 74983.5 40 80010.0 41 85298.5 42 90587.0 43 92723.5 44 94860.0 45 103193.5 46 111527.0 47 118802.5 48 126078.0 49 131262.5 50 136447.0 51 131453.5 52 126460.0 53 125737.5 54 125015.0 55 126401.5 56 127788.0 57 125131.5 58 122475.0 59 111872.5 60 101270.0 61 88830.5 62 76391.0 63 65896.0 64 55401.0 65 46566.5 66 37732.0 67 32969.0 68 28206.0 69 25454.5 70 22703.0 71 17566.0 72 12429.0 73 10930.0 74 9431.0 75 6895.0 76 4359.0 77 3977.0 78 3595.0 79 3032.5 80 2470.0 81 1973.5 82 1477.0 83 1265.5 84 1054.0 85 803.0 86 552.0 87 377.5 88 203.0 89 143.5 90 84.0 91 51.0 92 18.0 93 23.5 94 29.0 95 20.5 96 12.0 97 14.0 98 16.0 99 12.5 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03036287880801105 2 0.003505583772991965 3 4.5233339006347937E-4 4 0.0 5 0.0 6 1.1308334751586984E-4 7 0.0 8 0.0 9 0.0 10 1.6962502127380476E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 6.219584113372842E-4 17 0.0 18 0.0 19 5.654167375793492E-5 20 2.827083687896746E-4 21 0.0 22 0.0 23 5.654167375793492E-5 24 7.350417588531539E-4 25 2.2616669503173968E-4 26 3.392500425476095E-4 27 5.654167375793492E-4 28 0.0015266251914642429 29 3.392500425476095E-4 30 0.0011873751489166332 31 3.392500425476095E-4 32 6.78500085095219E-4 33 3.392500425476095E-4 34 0.0011308334751586983 35 5.654167375793492E-5 36 5.654167375793492E-5 37 0.001978958581527722 38 0.0 39 3.9579171630554444E-4 40 5.654167375793492E-5 41 0.0011873751489166332 42 0.004353708879360989 43 0.003957917163055444 44 0.004466792226876858 45 0.0024312919715912015 46 0.0019224169077697872 47 0.0011873751489166332 48 0.0031097920566864204 49 0.0031097920566864204 50 0.0010742918014007635 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1768607.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.1094899064655 #Duplication Level Percentage of deduplicated Percentage of total 1 70.06854480617766 33.70961949113529 2 16.39000713863435 15.770297660060534 3 6.073685924892002 8.766057950959 4 2.706328657196463 5.208003648678862 5 1.4328763114185479 3.4467474220702075 6 0.84913151425863 2.4510770408692393 7 0.5250385164411708 1.768153464506249 8 0.3669868160902899 1.4124438819601368 9 0.25052984181620885 1.0847576606512768 >10 1.1711424990561183 9.746747895185766 >50 0.07834234957772898 2.6739105129445724 >100 0.0721527661300077 7.334423696213283 >500 0.010745659738668017 3.501295015472798 >1k 0.00448719857219104 3.1264646592927368 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2555 0.1444639764515237 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 2297 0.1298762246219765 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 2140 0.12099918184198073 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2122 0.11998143171433788 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 2078 0.11749359806898876 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 2062 0.1165889312888618 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 2000 0.11308334751586983 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA 1787 0.10103997100542969 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.6962502127380476E-4 2 0.0 0.0 0.0 0.0 1.6962502127380476E-4 3 0.0 0.0 0.0 0.0 1.6962502127380476E-4 4 0.0 0.0 0.0 0.0 1.6962502127380476E-4 5 0.0 0.0 0.0 0.0 1.6962502127380476E-4 6 0.0 0.0 0.0 0.0 2.827083687896746E-4 7 0.0 0.0 0.0 0.0 2.827083687896746E-4 8 0.0 0.0 0.0 0.0 2.827083687896746E-4 9 0.0 0.0 0.0 0.0 2.827083687896746E-4 10 0.0 0.0 0.0 0.0 2.827083687896746E-4 11 0.0 0.0 0.0 0.0 3.392500425476095E-4 12 0.0 0.0 0.0 0.0 0.0014700835177063078 13 0.0 0.0 0.0 0.0 0.0016962502127380475 14 0.0 0.0 0.0 0.0 0.0016962502127380475 15 0.0 0.0 0.0 1.6962502127380476E-4 0.0018658752340118523 16 0.0 0.0 0.0 2.827083687896746E-4 0.001978958581527722 17 0.0 0.0 0.0 2.827083687896746E-4 0.002035500255285657 18 0.0 0.0 0.0 3.9579171630554444E-4 0.002035500255285657 19 0.0 0.0 0.0 4.523333900634793E-4 0.002035500255285657 20 0.0 0.0 0.0 5.654167375793492E-4 0.0022616669503173967 21 0.0 0.0 0.0 7.350417588531539E-4 0.0025443753191070713 22 0.0 0.0 0.0 9.046667801269586E-4 0.0026009169928650063 23 0.0 0.0 0.0 0.0015266251914642427 0.0026009169928650063 24 0.0 0.0 0.0 0.0017527918864959824 0.0026009169928650063 25 0.0 0.0 0.0 0.0019224169077697872 0.0026009169928650063 26 0.0 0.0 0.0 0.0022616669503173967 0.002657458666622941 27 0.0 0.0 0.0 0.002883625361654681 0.0027705420141388108 28 0.0 0.0 0.0 0.003901375489297509 0.002827083687896746 29 0.0 0.0 0.0 0.005201833985730013 0.002827083687896746 30 0.0 0.0 0.0 0.006728459177194255 0.002827083687896746 31 0.0 0.0 0.0 0.010403667971460025 0.0029401670354126156 32 0.0 0.0 0.0 0.014700835177063078 0.0029967087091705507 33 0.0 0.0 0.0 0.018658752340118524 0.0029967087091705507 34 0.0 0.0 0.0 0.023069002893237447 0.00322287540420229 35 0.0 0.0 0.0 0.028949336964062676 0.00322287540420229 36 0.0 0.0 0.0 0.035225462751193454 0.00322287540420229 37 0.0 0.0 0.0 0.04800388102048674 0.00322287540420229 38 0.0 0.0 0.0 0.06151734104863319 0.00344904209923403 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1000 0.0 25.30891 1 GTATCAA 2260 0.0 24.734371 1 CGCAATA 495 0.0 20.000822 36 GTCCTAC 755 0.0 19.238564 1 TAGGACG 500 0.0 18.918636 4 CGTCGTA 640 0.0 18.905426 10 ATACCGT 620 0.0 18.805098 6 CAATACG 530 0.0 18.682653 38 ATACGAA 520 0.0 18.618782 40 GTCCTAG 345 0.0 18.499268 1 ACCGTCG 645 0.0 18.41728 8 TACGAAT 525 0.0 18.022337 41 CTAGCGG 520 0.0 17.767952 29 GTAGGAC 855 0.0 17.753107 3 TACCGTC 660 0.0 17.665394 7 CCGTCGT 675 0.0 17.598734 9 GGCGTTA 660 0.0 17.336496 42 CCTATTC 600 0.0 17.232092 3 ACGGACC 910 0.0 17.163599 8 CGGACCA 910 0.0 17.163599 9 >>END_MODULE