##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062126_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1002248 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.259717155833687 32.0 32.0 32.0 32.0 32.0 2 31.40517416846928 32.0 32.0 32.0 32.0 32.0 3 31.527849394561027 32.0 32.0 32.0 32.0 32.0 4 31.616603874490146 32.0 32.0 32.0 32.0 32.0 5 31.59261280641119 32.0 32.0 32.0 32.0 32.0 6 35.21418451321429 36.0 36.0 36.0 36.0 36.0 7 35.211361858542 36.0 36.0 36.0 36.0 36.0 8 35.15956629496891 36.0 36.0 36.0 36.0 36.0 9 35.253793472274324 36.0 36.0 36.0 36.0 36.0 10 35.13156623909452 36.0 36.0 36.0 36.0 36.0 11 35.251988529785045 36.0 36.0 36.0 36.0 36.0 12 35.16131636082088 36.0 36.0 36.0 36.0 36.0 13 35.201618761025216 36.0 36.0 36.0 36.0 36.0 14 35.16151990325748 36.0 36.0 36.0 36.0 36.0 15 35.13762661536865 36.0 36.0 36.0 36.0 36.0 16 35.164066179229096 36.0 36.0 36.0 36.0 36.0 17 35.135343747256165 36.0 36.0 36.0 36.0 36.0 18 35.140122005731115 36.0 36.0 36.0 36.0 36.0 19 35.124244697919075 36.0 36.0 36.0 36.0 36.0 20 35.12223521523615 36.0 36.0 36.0 36.0 36.0 21 35.11484283331072 36.0 36.0 36.0 36.0 36.0 22 35.10043921264996 36.0 36.0 36.0 36.0 36.0 23 35.06771278166681 36.0 36.0 36.0 36.0 36.0 24 35.05162893814705 36.0 36.0 36.0 36.0 36.0 25 35.03851142631365 36.0 36.0 36.0 36.0 36.0 26 34.99425591270823 36.0 36.0 36.0 36.0 36.0 27 34.97779591478356 36.0 36.0 36.0 36.0 36.0 28 34.959664673813265 36.0 36.0 36.0 36.0 36.0 29 34.93677512950887 36.0 36.0 36.0 32.0 36.0 30 34.914884340003674 36.0 36.0 36.0 32.0 36.0 31 34.92718768209066 36.0 36.0 36.0 32.0 36.0 32 34.89616442237849 36.0 36.0 36.0 32.0 36.0 33 34.88433601264358 36.0 36.0 36.0 32.0 36.0 34 34.86334420223338 36.0 36.0 36.0 32.0 36.0 35 34.85103287809005 36.0 36.0 36.0 32.0 36.0 36 34.82285921249032 36.0 36.0 36.0 32.0 36.0 37 34.82370032167687 36.0 36.0 36.0 32.0 36.0 38 34.8081013880796 36.0 36.0 36.0 32.0 36.0 39 34.786748389620136 36.0 36.0 36.0 32.0 36.0 40 34.78033380959603 36.0 36.0 36.0 32.0 36.0 41 34.756608144890286 36.0 36.0 36.0 32.0 36.0 42 34.71606029645357 36.0 36.0 36.0 32.0 36.0 43 34.72260159162203 36.0 36.0 36.0 32.0 36.0 44 34.67306993877763 36.0 36.0 36.0 32.0 36.0 45 34.66032159704983 36.0 36.0 36.0 32.0 36.0 46 34.64768500411076 36.0 36.0 36.0 32.0 36.0 47 34.616682697296476 36.0 36.0 36.0 32.0 36.0 48 34.59485277097086 36.0 36.0 36.0 32.0 36.0 49 34.58157661576775 36.0 36.0 36.0 32.0 36.0 50 34.15513026715943 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 2.0 19 1.0 20 8.0 21 22.0 22 66.0 23 194.0 24 475.0 25 1126.0 26 2398.0 27 4609.0 28 8120.0 29 13241.0 30 19990.0 31 29621.0 32 45110.0 33 76250.0 34 170244.0 35 630770.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.526697047545476 17.98410293568715 12.418034504853555 26.07116551191381 2 16.245826689629435 19.844602185986457 36.793380975092845 27.11619014929126 3 18.427992301298982 23.189493208759917 28.56451553359601 29.817998956345093 4 12.822413681285513 15.955479947517823 35.03384900897485 36.18825736222181 5 14.948296230074792 36.28313551137044 32.848057566590306 15.920510691964465 6 35.13775088700955 34.659823356388266 16.24464701210484 13.957778744497348 7 30.955611784707976 30.15361467421237 19.903556804303925 18.98721673677573 8 28.48117432012835 32.925683064471066 18.81201060017082 19.781132015229762 9 27.113448966722807 14.549093637502894 18.64179324877675 39.69566414699755 10 16.740966307740198 26.52946176994117 30.63862437241082 26.090947549907806 11 37.21354395319322 21.268189110878744 21.760382659780813 19.757884276147223 12 24.660962157070905 23.416559574077475 28.222056816277007 23.700421452574613 13 29.380851845052327 19.437803817019343 25.06844613309281 26.112898204835528 14 23.77704919341321 19.296820746960833 24.843451920083652 32.08267813954231 15 25.315590552438117 26.968774195608276 21.962927339341164 25.75270791261245 16 25.922330290827382 25.93230790107 23.241446194739005 24.903915613363612 17 24.2917920514683 26.04744534286923 24.824294984874005 24.83646762078847 18 25.016487951572813 25.15487699140032 25.550986932362978 24.27764812466388 19 25.611126188328637 24.987927139789754 25.260514363710378 24.14043230817123 20 25.93186076815779 24.291338818369216 24.76118542228324 25.015614991189754 21 26.779499684708775 24.207182254292352 24.490545254268405 24.52277280673047 22 26.129860074552408 24.07448056768385 24.935046016554786 24.86061334120896 23 24.75574907607698 24.130354962045324 25.28575761687726 25.82813834500044 24 24.82144959580459 24.740031808811878 25.187630083872293 25.25088851151124 25 25.26420711922446 24.302864372348452 25.07124013713228 25.361688371294814 26 24.823546314976564 25.04265419866979 25.48705607206215 24.646743414291503 27 25.347768911025838 24.64843960464796 24.877724630479943 25.12606685384626 28 25.036543325667132 24.51770293394264 25.321705987118794 25.12404775327144 29 24.780942004258435 24.900772864147125 25.29748185575198 25.020803275842457 30 24.84963621342678 24.962483886030835 25.34133677098009 24.8465431295623 31 25.392094747292326 24.64596979780393 24.650060613921745 25.311874840981996 32 25.233003305598768 24.701493356375074 24.599022787977717 25.46648055004844 33 24.911174413441824 24.44971040015166 25.081092946335477 25.558022240071043 34 25.522155892955674 24.55172867948663 25.16006661085829 24.76604881669941 35 25.77251801461124 24.421347339265367 25.24649735293472 24.559637293188672 36 24.770914068829548 24.95899202190285 24.916287850064457 25.353806059203148 37 25.66022900976624 24.692185810015285 24.72291734016611 24.924667840052365 38 25.01646299119579 24.467197739481644 25.2553260270911 25.26101324223146 39 25.61205460972882 24.51830351842225 24.60660580959232 25.263036062256607 40 25.713895163672063 24.584434191936527 24.953404746130698 24.74826589826071 41 24.736039687338483 25.054727738232792 25.274935793437457 24.934296780991268 42 25.82276081240864 24.966947879924767 24.77187800899018 24.438413298676416 43 25.468741425157525 24.263598764723785 24.954375601798034 25.313284208320653 44 25.015465789673243 24.781283800233883 24.834266602275765 25.36898380781711 45 25.177030752514153 24.98485871963138 24.78320779623778 25.05490273161669 46 25.08418801841111 24.797424919254336 24.78315660917103 25.335230453163526 47 25.24961561141482 24.691167094541132 25.10952954429124 24.949687749752805 48 25.828506428389687 25.214554053851796 24.197586298075723 24.759353219682797 49 25.149444876268323 25.231563476280893 24.451386886368013 25.167604761082767 50 25.357752212565977 25.27623399818405 24.39270426947906 24.97330951977091 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 106.0 1 73.0 2 40.0 3 89.0 4 138.0 5 156.5 6 175.0 7 139.0 8 103.0 9 143.0 10 183.0 11 299.0 12 415.0 13 795.0 14 1175.0 15 1481.0 16 1787.0 17 1787.0 18 1787.0 19 1796.0 20 1805.0 21 2151.0 22 2497.0 23 3119.0 24 3741.0 25 4824.5 26 5908.0 27 7245.5 28 8583.0 29 10189.0 30 11795.0 31 13343.5 32 14892.0 33 17014.0 34 19136.0 35 22153.0 36 25170.0 37 29803.0 38 34436.0 39 38497.5 40 42559.0 41 46252.0 42 49945.0 43 52321.0 44 54697.0 45 59803.5 46 64910.0 47 69193.5 48 73477.0 49 76424.0 50 79371.0 51 78051.0 52 76731.0 53 76021.0 54 75311.0 55 75448.0 56 75585.0 57 72949.5 58 70314.0 59 64160.5 60 58007.0 61 51346.0 62 44685.0 63 38602.5 64 32520.0 65 27309.5 66 22099.0 67 18889.0 68 15679.0 69 13859.5 70 12040.0 71 9543.5 72 7047.0 73 6286.0 74 5525.0 75 4066.5 76 2608.0 77 2358.5 78 2109.0 79 1792.5 80 1476.0 81 1126.5 82 777.0 83 618.5 84 460.0 85 365.0 86 270.0 87 170.5 88 71.0 89 53.5 90 36.0 91 32.0 92 28.0 93 18.0 94 8.0 95 10.0 96 12.0 97 13.5 98 15.0 99 9.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03013226267350995 2 0.004589682393978336 3 9.977570421692036E-5 4 2.993271126507611E-4 5 0.0 6 3.9910281686768144E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 3.9910281686768144E-4 17 0.0 18 9.977570421692036E-5 19 0.0 20 5.986542253015222E-4 21 0.0 22 0.0 23 0.0 24 9.977570421692036E-4 25 3.9910281686768144E-4 26 1.9955140843384072E-4 27 1.9955140843384072E-4 28 0.0012970841548199648 29 1.9955140843384072E-4 30 0.0011973084506030445 31 2.993271126507611E-4 32 8.979813379522833E-4 33 2.993271126507611E-4 34 8.979813379522833E-4 35 5.986542253015222E-4 36 3.9910281686768144E-4 37 0.0019955140843384072 38 0.0 39 8.979813379522833E-4 40 0.0 41 0.001396859859036885 42 0.004290355281327576 43 0.004290355281327576 44 0.003591925351809133 45 0.0020952897885553276 46 0.00269394401385685 47 6.984299295184426E-4 48 0.005288112323496779 49 0.003891252464459894 50 0.0017959626759045666 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1002248.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.87093321139895 #Duplication Level Percentage of deduplicated Percentage of total 1 80.64041180259662 49.89297532778163 2 12.03041940568935 14.886665511090474 3 3.2522163052516295 6.036529734337386 4 1.309095779265172 3.239799101049589 5 0.7354344772106425 2.2751008710429885 6 0.4369734085308543 1.62215715446219 7 0.3056289769133177 1.323668501265045 8 0.21036270797008993 1.0412269643989165 9 0.15238346970524755 0.8485296728989147 >10 0.8163802852613956 8.872644486990438 >50 0.05948789164643973 2.561812932095599 >100 0.047478508592703424 5.803595410525532 >500 0.003726981366672292 1.5952943320613109 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 1.9955140843384072E-4 13 0.0 0.0 0.0 0.0 2.9932711265076106E-4 14 0.0 0.0 0.0 0.0 2.9932711265076106E-4 15 0.0 0.0 0.0 0.0 3.9910281686768144E-4 16 0.0 0.0 0.0 0.0 3.9910281686768144E-4 17 0.0 0.0 0.0 9.977570421692036E-5 3.9910281686768144E-4 18 0.0 0.0 0.0 9.977570421692036E-5 3.9910281686768144E-4 19 0.0 9.977570421692036E-5 0.0 9.977570421692036E-5 3.9910281686768144E-4 20 0.0 9.977570421692036E-5 0.0 9.977570421692036E-5 3.9910281686768144E-4 21 0.0 9.977570421692036E-5 0.0 1.9955140843384072E-4 4.988785210846018E-4 22 0.0 9.977570421692036E-5 0.0 1.9955140843384072E-4 4.988785210846018E-4 23 0.0 9.977570421692036E-5 0.0 2.9932711265076106E-4 4.988785210846018E-4 24 0.0 9.977570421692036E-5 0.0 2.9932711265076106E-4 4.988785210846018E-4 25 0.0 9.977570421692036E-5 0.0 2.9932711265076106E-4 4.988785210846018E-4 26 0.0 9.977570421692036E-5 0.0 3.9910281686768144E-4 4.988785210846018E-4 27 0.0 9.977570421692036E-5 0.0 4.988785210846018E-4 4.988785210846018E-4 28 0.0 9.977570421692036E-5 0.0 5.986542253015221E-4 4.988785210846018E-4 29 0.0 9.977570421692036E-5 0.0 0.0014966355632538054 4.988785210846018E-4 30 0.0 9.977570421692036E-5 0.0 0.002993271126507611 4.988785210846018E-4 31 0.0 9.977570421692036E-5 0.0 0.005288112323496779 4.988785210846018E-4 32 0.0 9.977570421692036E-5 0.0 0.007483177816269027 4.988785210846018E-4 33 0.0 9.977570421692036E-5 0.0 0.009877794717475116 5.986542253015221E-4 34 0.0 9.977570421692036E-5 0.0 0.011973084506030443 5.986542253015221E-4 35 0.0 9.977570421692036E-5 0.0 0.015165907040971895 5.986542253015221E-4 36 0.0 9.977570421692036E-5 0.0 0.021252224998204037 5.986542253015221E-4 37 0.0 9.977570421692036E-5 0.0 0.029134505631340745 5.986542253015221E-4 38 0.0 9.977570421692036E-5 0.0 0.040010057390985065 5.986542253015221E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1150 0.0 25.068174 1 GGACCGT 80 1.3094541E-7 24.749805 6 GGTATCA 590 0.0 23.125385 1 CCGTGTA 65 4.9316173E-4 20.307531 9 TTGTTCG 65 4.9316173E-4 20.307531 36 TACTAGT 55 0.004483292 19.99984 17 ATAAGTC 60 0.007411579 18.333189 3 ACTATAC 75 0.00129073 17.599861 3 GTATTAC 140 8.3400664E-8 17.290752 1 GTCCTAA 115 4.2595675E-6 17.22241 1 GTCTTAG 135 1.081693E-6 16.301048 1 GACTATA 135 1.081693E-6 16.301048 1 TATACTG 135 1.0850799E-6 16.296167 5 CGTCGTA 230 1.8189894E-12 16.26074 10 ATACTGT 235 3.6379788E-12 15.914766 6 ATCAACG 1870 0.0 15.764581 3 TCAACGC 1865 0.0 15.688884 4 TATCAAC 1905 0.0 15.591206 2 ATATACC 85 0.0029796236 15.529287 3 CAACGCA 1890 0.0 15.481358 5 >>END_MODULE