##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062125_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 731506 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.19535041407726 32.0 32.0 32.0 32.0 32.0 2 31.384528629977062 32.0 32.0 32.0 32.0 32.0 3 31.529634753508514 32.0 32.0 32.0 32.0 32.0 4 31.622808288653818 32.0 32.0 32.0 32.0 32.0 5 31.592191998425168 32.0 32.0 32.0 32.0 32.0 6 35.21442886319456 36.0 36.0 36.0 36.0 36.0 7 35.22723668705383 36.0 36.0 36.0 36.0 36.0 8 35.171327371204065 36.0 36.0 36.0 36.0 36.0 9 35.254953479534 36.0 36.0 36.0 36.0 36.0 10 35.13295994838047 36.0 36.0 36.0 36.0 36.0 11 35.256737470369345 36.0 36.0 36.0 36.0 36.0 12 35.18905518204909 36.0 36.0 36.0 36.0 36.0 13 35.21983141628367 36.0 36.0 36.0 36.0 36.0 14 35.181038843153715 36.0 36.0 36.0 36.0 36.0 15 35.15630493803195 36.0 36.0 36.0 36.0 36.0 16 35.1678906256408 36.0 36.0 36.0 36.0 36.0 17 35.15387433595897 36.0 36.0 36.0 36.0 36.0 18 35.14797281225308 36.0 36.0 36.0 36.0 36.0 19 35.13674802393965 36.0 36.0 36.0 36.0 36.0 20 35.12807687154993 36.0 36.0 36.0 36.0 36.0 21 35.12641318047972 36.0 36.0 36.0 36.0 36.0 22 35.105609523366866 36.0 36.0 36.0 36.0 36.0 23 35.07878404278297 36.0 36.0 36.0 36.0 36.0 24 35.066811482065766 36.0 36.0 36.0 36.0 36.0 25 35.05054777404423 36.0 36.0 36.0 36.0 36.0 26 35.001198896523064 36.0 36.0 36.0 36.0 36.0 27 34.98664535902645 36.0 36.0 36.0 36.0 36.0 28 34.96162437491969 36.0 36.0 36.0 36.0 36.0 29 34.93890275677848 36.0 36.0 36.0 36.0 36.0 30 34.931740819624174 36.0 36.0 36.0 36.0 36.0 31 34.922932962955876 36.0 36.0 36.0 36.0 36.0 32 34.892307103427726 36.0 36.0 36.0 32.0 36.0 33 34.869768669019805 36.0 36.0 36.0 32.0 36.0 34 34.8470661894776 36.0 36.0 36.0 32.0 36.0 35 34.839814027499436 36.0 36.0 36.0 32.0 36.0 36 34.81225991311076 36.0 36.0 36.0 32.0 36.0 37 34.784683926037516 36.0 36.0 36.0 32.0 36.0 38 34.781326468955825 36.0 36.0 36.0 32.0 36.0 39 34.75564793726914 36.0 36.0 36.0 32.0 36.0 40 34.73541980516906 36.0 36.0 36.0 32.0 36.0 41 34.700074913944654 36.0 36.0 36.0 32.0 36.0 42 34.68077363685329 36.0 36.0 36.0 32.0 36.0 43 34.6694299158175 36.0 36.0 36.0 32.0 36.0 44 34.63696128261422 36.0 36.0 36.0 32.0 36.0 45 34.591170817464246 36.0 36.0 36.0 32.0 36.0 46 34.56218951040729 36.0 36.0 36.0 32.0 36.0 47 34.527041473344035 36.0 36.0 36.0 32.0 36.0 48 34.50841278130323 36.0 36.0 36.0 32.0 36.0 49 34.48221340631519 36.0 36.0 36.0 32.0 36.0 50 34.056421956894404 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 2.0 20 3.0 21 22.0 22 65.0 23 137.0 24 397.0 25 959.0 26 1947.0 27 3760.0 28 6521.0 29 9959.0 30 15058.0 31 21890.0 32 32993.0 33 54382.0 34 121502.0 35 461908.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.968591714163814 17.461902000897066 11.865078930958658 26.70442735398046 2 15.89235936899754 20.175235928697106 37.25957693469734 26.67282776760801 3 18.719924976486798 23.646350532601325 28.472298169251296 29.161426321660578 4 12.629715449655162 15.948489757417928 35.57405622654664 35.84773856638027 5 14.41439224612272 36.64021435260183 33.64652326368241 15.298870137593045 6 34.440639503489386 35.19497474385001 16.645409122288978 13.718976630371632 7 30.15887771255465 30.340147585939143 20.538040699597815 18.96293400190839 8 27.831624074170275 33.285031154905084 19.379061825877024 19.504282945047613 9 27.263070979595522 14.444857595153012 18.330266600684066 39.9618048245674 10 15.438014178967773 27.309687138588064 32.41203763195381 24.84026105049036 11 36.521778358619066 21.450678463334548 22.50439504255604 19.523148135490345 12 24.26596637621564 23.611836403255747 29.34904156630294 22.773155654225665 13 29.58171224842995 20.00885843725137 25.144564774588314 25.264864539730365 14 23.29864690105071 19.066419140786266 26.07784488438919 31.55708907377383 15 24.976008399110874 26.819192187077075 22.909039707124755 25.2957597066873 16 25.193779374492483 26.017973976831232 24.014151704301558 24.774094944374724 17 23.78859503544742 25.78844192665542 25.7273351141344 24.695627923762757 18 23.997648683194235 25.61745989432745 26.368650931982696 24.016240490495623 19 25.063225728838862 25.16630075488103 26.050914141510802 23.71955937476931 20 25.40361938247943 24.734725347433926 25.89452444682614 23.967130823260508 21 25.483591385443184 24.478541529392785 25.559325555771245 24.478541529392785 22 24.960970928468118 24.68578521570568 25.806213482869587 24.547030372956613 23 24.45205432635457 24.69374782127258 25.72819051134305 25.126007341029794 24 24.28116981384851 24.91165425611175 26.11589047725157 24.691285452788172 25 24.776795173772356 24.45731596452783 26.047466654272096 24.71842220742772 26 24.430318316347805 24.85875011107238 26.035228740746817 24.675702831833 27 24.431068635398624 25.216848051204167 25.866469447151957 24.485613866245252 28 24.505600866172518 24.895487864562117 25.972461838374617 24.62644943089075 29 24.384762394293418 25.20430454432363 25.749891320098538 24.661041741284418 30 24.60164046479836 25.149555707450443 25.75816814764183 24.490635680109367 31 24.60403389191007 25.044224075942378 25.64982734155204 24.701914690595515 32 24.366543951289334 25.273307149799795 25.6927175965102 24.667431302400676 33 24.48742730749987 24.976555216225158 25.859391447233516 24.676626029041458 34 24.51271493447728 25.038072349768008 26.035198810119454 24.414013905635255 35 24.691833958756263 24.912338261529314 25.89838757083 24.497440208884424 36 24.665073601784815 25.17689582011855 25.736838076073404 24.421192502023228 37 24.975529599615033 24.872863282916104 25.5440904666601 24.60751665080875 38 24.617843189256135 25.22139257914494 25.615647718542295 24.545116513056627 39 24.771565276828433 25.31414900888585 25.445386192754615 24.4688995215311 40 24.765927779030903 25.15963663953083 25.679113608246013 24.395321973192257 41 24.41985883858303 25.18663628173774 25.750953858015617 24.642551021663618 42 24.630334448892096 25.265902180808013 25.62299035369775 24.48077301660214 43 24.54623129660895 24.87706514829422 25.711395312275716 24.86530824282111 44 24.37359530592938 25.190846999764858 25.783621062071756 24.651936632234005 45 24.589334733204282 25.368286361101084 25.327137810733074 24.715241094961556 46 24.60689824877989 25.3028749538613 25.380934804303546 24.70929199305527 47 24.513019192149795 25.465312913108324 25.598601224611993 24.423066670129884 48 24.62411514284855 25.55237780153498 25.23671381347799 24.586793242138477 49 24.64845149136406 25.246555603859584 25.344439614041708 24.76055329073465 50 24.484411355390474 25.684831317823527 25.19214101551072 24.63861631127528 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 522.0 1 300.0 2 78.0 3 247.0 4 416.0 5 384.0 6 352.0 7 270.0 8 188.0 9 270.0 10 352.0 11 557.0 12 762.0 13 1261.0 14 1760.0 15 2142.0 16 2524.0 17 2373.5 18 2223.0 19 2155.5 20 2088.0 21 2344.0 22 2600.0 23 2957.5 24 3315.0 25 3964.5 26 4614.0 27 5734.0 28 6854.0 29 8234.5 30 9615.0 31 11302.5 32 12990.0 33 14796.0 34 16602.0 35 18924.0 36 21246.0 37 24246.5 38 27247.0 39 29798.0 40 32349.0 41 35087.5 42 37826.0 43 39915.0 44 42004.0 45 44794.5 46 47585.0 47 49573.5 48 51562.0 49 53252.0 50 54942.0 51 55460.0 52 55978.0 53 56027.5 54 56077.0 55 54494.0 56 52911.0 57 50340.5 58 47770.0 59 44031.0 60 40292.0 61 35576.0 62 30860.0 63 26447.5 64 22035.0 65 18455.0 66 14875.0 67 12621.5 68 10368.0 69 8579.5 70 6791.0 71 5465.5 72 4140.0 73 3479.5 74 2819.0 75 2202.5 76 1586.0 77 1302.5 78 1019.0 79 862.5 80 706.0 81 527.0 82 348.0 83 256.0 84 164.0 85 125.0 86 86.0 87 57.5 88 29.0 89 20.0 90 11.0 91 11.5 92 12.0 93 7.5 94 3.0 95 4.5 96 6.0 97 4.0 98 2.0 99 2.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03198880118549951 2 0.0047846497499678745 3 2.734085571410214E-4 4 1.367042785705107E-4 5 1.367042785705107E-4 6 1.367042785705107E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 5.468171142820428E-4 17 0.0 18 1.367042785705107E-4 19 0.0 20 0.0 21 0.0 22 0.0 23 1.367042785705107E-4 24 6.835213928525535E-4 25 4.1011283571153206E-4 26 1.367042785705107E-4 27 4.1011283571153206E-4 28 0.0016404513428461282 29 0.0 30 8.202256714230641E-4 31 5.468171142820428E-4 32 4.1011283571153206E-4 33 0.0 34 5.468171142820428E-4 35 1.367042785705107E-4 36 2.734085571410214E-4 37 0.001367042785705107 38 0.0 39 8.202256714230641E-4 40 1.367042785705107E-4 41 4.1011283571153206E-4 42 0.004647945471397364 43 0.002870789849980725 44 0.004101128357115321 45 0.001367042785705107 46 0.0021872684571281713 47 0.0012303385071345963 48 0.0043745369142563426 49 0.0038277197999742997 50 0.0016404513428461282 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 731506.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.08351223580368 #Duplication Level Percentage of deduplicated Percentage of total 1 76.25789527850205 48.86873765156521 2 14.323225349090048 18.357651738291715 3 4.498512153664384 8.648413759267894 4 1.7873231237314313 4.5815177307591215 5 0.938904333592952 3.008414367502652 6 0.5452387699792388 2.096448923243946 7 0.3574330620254379 1.6033896202651547 8 0.2581028018460694 1.323210724815824 9 0.18429975734187443 1.0629518179206294 >10 0.8177598827915935 8.705845115494881 >50 0.02594514000282221 1.0819559073163534 >100 0.005145933535570144 0.5395853349492625 >500 2.1441389648452008E-4 0.12187730860737281 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 887 0.12125669509204298 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 1.367042785705107E-4 7 0.0 0.0 0.0 0.0 1.367042785705107E-4 8 0.0 0.0 0.0 1.367042785705107E-4 1.367042785705107E-4 9 0.0 0.0 0.0 1.367042785705107E-4 1.367042785705107E-4 10 0.0 0.0 0.0 2.734085571410214E-4 1.367042785705107E-4 11 0.0 0.0 0.0 4.101128357115321E-4 1.367042785705107E-4 12 0.0 0.0 0.0 4.101128357115321E-4 6.835213928525535E-4 13 0.0 0.0 0.0 4.101128357115321E-4 6.835213928525535E-4 14 0.0 0.0 0.0 5.468171142820428E-4 6.835213928525535E-4 15 0.0 0.0 0.0 9.569299499935749E-4 6.835213928525535E-4 16 0.0 0.0 0.0 0.0010936342285640856 8.202256714230642E-4 17 0.0 0.0 0.0 0.0012303385071345963 8.202256714230642E-4 18 0.0 0.0 0.0 0.001367042785705107 9.569299499935749E-4 19 0.0 0.0 0.0 0.0015037470642756178 9.569299499935749E-4 20 0.0 0.0 0.0 0.0023239727356986818 0.0012303385071345963 21 0.0 0.0 0.0 0.0028707898499807246 0.001367042785705107 22 0.0 0.0 0.0 0.003691015521403789 0.001367042785705107 23 0.0 0.0 0.0 0.005468171142820428 0.001367042785705107 24 0.0 0.0 0.0 0.006425101092814003 0.001367042785705107 25 0.0 0.0 0.0 0.008475665271371663 0.001367042785705107 26 0.0 0.0 0.0 0.010799638007070345 0.001367042785705107 27 0.0 0.0 0.0 0.012576793628486984 0.001367042785705107 28 0.0 0.0 0.0 0.016131104871320263 0.001367042785705107 29 0.0 0.0 0.0 0.02146257173557018 0.001367042785705107 30 0.0 0.0 0.0 0.03144198407121746 0.001367042785705107 31 0.0 0.0 0.0 0.04962365312109539 0.001367042785705107 32 0.0 0.0 0.0 0.06548134943527463 0.001367042785705107 33 0.0 0.0 0.0 0.08065552435660131 0.001367042785705107 34 0.0 0.0 0.0 0.09815367201362668 0.001367042785705107 35 0.0 0.0 0.0 0.1163353410635046 0.001367042785705107 36 0.0 0.0 0.0 0.14476983100617083 0.001367042785705107 37 0.0 0.0 0.0 0.18058635199164463 0.001367042785705107 38 0.0 0.0 0.0 0.23007330083416952 0.001367042785705107 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCTAGA 50 0.0025782406 22.00181 37 ATAGGGG 50 0.0025802883 21.998802 3 TTCGTAT 55 0.0044815848 20.00028 25 CCGCTAG 55 0.0044815848 20.00028 36 ATTGCGC 55 0.004483358 19.998913 30 GTATCAA 1420 0.0 19.05921 1 AGGCGTT 60 0.007402935 18.336096 42 GCTTAAC 60 0.007402935 18.336096 1 ATAATAC 60 0.007411698 18.332336 3 TAACGGA 60 0.007411698 18.332336 4 TATTGCG 60 0.007411698 18.332336 29 ACTTATC 85 1.4304499E-4 18.116663 8 GTCCTAT 110 2.7893439E-6 18.002714 1 AAATCCG 75 0.0012906801 17.599043 29 ACGCTCC 75 0.0012906801 17.599043 35 GTTATAG 90 2.2113182E-4 17.113691 1 TAAGACT 155 1.4373654E-8 17.031332 4 CTATAAC 105 3.7728154E-5 16.760994 3 ATTCGTA 80 0.0019862463 16.501358 24 GCATTCG 80 0.0019862463 16.501358 22 >>END_MODULE