##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062124_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 201212 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.002678766673956 32.0 32.0 32.0 32.0 32.0 2 30.65263503170785 32.0 32.0 32.0 32.0 32.0 3 30.726084925352364 32.0 32.0 32.0 32.0 32.0 4 30.6864302327893 32.0 32.0 32.0 32.0 32.0 5 30.64931018030734 32.0 32.0 32.0 32.0 32.0 6 34.22284953183707 36.0 36.0 36.0 32.0 36.0 7 34.13501679820289 36.0 36.0 36.0 32.0 36.0 8 34.000039759060094 36.0 36.0 36.0 32.0 36.0 9 34.10859690276922 36.0 36.0 36.0 32.0 36.0 10 33.855575214201934 36.0 36.0 36.0 32.0 36.0 11 34.23144742858279 36.0 36.0 36.0 32.0 36.0 12 34.03461523169592 36.0 36.0 36.0 32.0 36.0 13 34.15621334711648 36.0 36.0 36.0 32.0 36.0 14 34.01706657654613 36.0 36.0 36.0 32.0 36.0 15 33.99649623282905 36.0 36.0 36.0 32.0 36.0 16 33.98154185635052 36.0 36.0 36.0 32.0 36.0 17 33.89096574756973 36.0 36.0 36.0 32.0 36.0 18 33.952612170248294 36.0 36.0 36.0 32.0 36.0 19 33.88427628570861 36.0 36.0 36.0 32.0 36.0 20 33.83154583225652 36.0 36.0 36.0 32.0 36.0 21 33.83318092360297 36.0 36.0 36.0 32.0 36.0 22 33.830611494344275 36.0 36.0 36.0 32.0 36.0 23 33.820646879907756 36.0 36.0 36.0 32.0 36.0 24 33.79510665367871 36.0 36.0 36.0 32.0 36.0 25 33.52191221199531 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 4 4.0 5 14.0 6 41.0 7 12.0 8 37.0 9 18.0 10 16.0 11 3.0 12 13.0 13 8.0 14 63.0 15 80.0 16 122.0 17 211.0 18 241.0 19 344.0 20 481.0 21 625.0 22 839.0 23 1085.0 24 1370.0 25 1829.0 26 2412.0 27 3214.0 28 4003.0 29 5531.0 30 7300.0 31 10132.0 32 14572.0 33 20316.0 34 43766.0 35 82510.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.21384019760351 19.918891114302895 12.498819647037191 24.368449041056405 2 16.951275271852573 19.718008866270402 37.840685446196055 25.490030415680977 3 18.603264218833868 24.017454227382064 29.085243424845437 28.29403812893863 4 12.569338131498897 16.067558701314194 35.86148279221425 35.50162037497267 5 13.847155797281577 38.066379644636235 32.28202400246587 15.80444055561632 6 31.203843227356142 37.49285113959051 16.41477812423849 14.888527508814855 7 29.34070963761915 32.74263198742314 18.636445045869735 19.280213329087978 8 28.090793296978866 32.464275763244835 17.975062691557536 21.469868248218763 9 26.60320840714129 15.218537905777918 20.023684891427664 38.15456879565313 10 17.33277596134227 25.940191994744776 28.740488596268595 27.986543447644358 11 35.149566801196336 23.28176086231693 21.193648076358443 20.375024260128292 12 24.203428628299868 25.371351795178025 27.10457565126521 23.3206439252569 13 27.33759964967107 20.741562745702996 26.367228320909263 25.55360928371667 14 22.835307756223038 21.123754272664403 25.207600491574084 30.833337479538475 15 26.040915039835184 26.653496091125785 22.97900504097973 24.3265838280593 16 24.926109845054583 27.80260133151552 22.41085911610457 24.860429707325327 17 22.042424875725867 26.997964839998605 25.241457552732538 25.718152731542986 18 22.641584532794674 26.33325538700353 26.38400342300478 24.641156657197016 19 25.283176551936844 25.85972749386886 26.43229879168055 22.424797162513745 20 24.762477988797915 25.13853378035556 26.158261786563468 23.940726444283055 21 26.049086712563174 23.036133550877473 26.975804846989533 23.93897488956982 22 24.97873335356359 24.769300414388688 26.073654729154956 24.17831150289276 23 24.402532615129044 24.888464465300885 26.621803767090924 24.087199152479148 24 23.872103781374665 26.318407465255323 25.853818681045375 23.955670072324637 25 24.06249533672571 25.694019568342462 26.360059490944543 23.883425603987284 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 133.0 1 133.0 2 163.5 3 194.0 4 194.0 5 194.0 6 462.5 7 731.0 8 731.0 9 731.0 10 724.0 11 717.0 12 717.0 13 717.0 14 747.5 15 778.0 16 778.0 17 778.0 18 1260.5 19 1743.0 20 1743.0 21 1743.0 22 2809.0 23 3875.0 24 3875.0 25 3875.0 26 5963.5 27 8052.0 28 8052.0 29 8052.0 30 9192.5 31 10333.0 32 10333.0 33 10333.0 34 11816.0 35 13299.0 36 13299.0 37 13299.0 38 14123.0 39 14947.0 40 14947.0 41 14947.0 42 16699.0 43 18451.0 44 18451.0 45 18451.0 46 22332.5 47 26214.0 48 26214.0 49 26214.0 50 27138.0 51 28062.0 52 28062.0 53 28062.0 54 25857.0 55 23652.0 56 23652.0 57 23652.0 58 21022.0 59 18392.0 60 18392.0 61 18392.0 62 15727.0 63 13062.0 64 13062.0 65 13062.0 66 10900.0 67 8738.0 68 8738.0 69 8738.0 70 6689.5 71 4641.0 72 4641.0 73 4641.0 74 3829.5 75 3018.0 76 3018.0 77 3018.0 78 2167.0 79 1316.0 80 1316.0 81 1316.0 82 894.5 83 473.0 84 473.0 85 473.0 86 358.5 87 244.0 88 244.0 89 244.0 90 148.5 91 53.0 92 53.0 93 53.0 94 34.0 95 15.0 96 15.0 97 15.0 98 47.0 99 79.0 100 79.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 4.969882511977417E-4 2 0.0 3 0.0 4 0.011927718028745801 5 0.03280122457905095 6 0.06510546090690417 7 0.10337355624913028 8 0.1133133212730851 9 0.119277180287458 10 0.1336898395721925 11 0.13170188656740153 12 0.1277259805578196 13 0.12822296880901735 14 0.11182235651949189 15 0.1287199570602151 16 0.11828320378506252 17 0.1217621215434467 18 0.10884042701230542 19 0.09393077947637318 20 0.08846390871319802 21 0.0894578852155935 22 0.09591873248116414 23 0.07703317893564997 24 0.08647595570840705 25 0.0859789674572093 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 201212.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.54471900284277 #Duplication Level Percentage of deduplicated Percentage of total 1 60.36505867014341 20.24928930680079 2 15.36387341472087 10.307536329841163 3 7.455256607798981 7.502534640081109 4 4.421002726087472 5.932051766296245 5 2.860910276164513 4.798421565314196 6 1.9838212634822803 3.9928036101226567 7 1.3600805973687329 3.1936465021966884 8 0.9822804314329738 2.6360256843528216 9 0.734858361977006 2.218555553346719 >10 4.066907668602584 24.574578056974733 >50 0.28890600924499227 6.5667057630757615 >100 0.11111769586345857 6.259567023835556 >500 0.0029631385563588953 0.552153947080691 >1k 0.0029631385563588953 1.216130250680874 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 1437 0.7141721169711548 No Hit TATCAACGCAGAGTACTTTTTTTTT 1010 0.5019581337097191 No Hit GGTATCAACGCAGAGTACTTTTTTT 562 0.27930739717313086 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 549 0.2728465499075602 No Hit CCATAGGGTCTTCTCGTCTTATTAT 464 0.23060254855575216 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 343 0.1704669701608254 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 325 0.16152118163926607 No Hit GTACATGGGGTGGTATCAACGCAAA 280 0.13915671033536767 No Hit GTATCAACGCAGAGTACATGGGGTG 269 0.1336898395721925 No Hit CTTCTACACCATTGGGATGTCCTGA 249 0.12375007454823769 No Hit CCATTGGGATGTCCTGATCCAACAT 244 0.12126513329224896 No Hit GTATTAGAGGCACTGCCTGCCCAGT 242 0.12027115678985348 No Hit ATCCTGACCGTGCAAAGGTAGCATA 239 0.11878019203626025 No Hit ATAAATAATCCACCTATAACTTCTC 234 0.11629525078027156 No Hit GTCAGGATACCGCGGCCGTTAAACT 230 0.11430729777548058 No Hit GTTCATGCTAGTCCCTAATTAAGGA 218 0.10834343876110768 No Hit GCAGAGTACTTTTTTTTTTTTTTTT 208 0.10337355624913028 No Hit CCTATAACTTCTCTGTTAACCCAAC 208 0.10337355624913028 No Hit GGTCAGGATACCGCGGCCGTTAAAC 207 0.10287656799793253 No Hit ATCGTAAATAGATAGAAACCGACCT 205 0.10188259149553705 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAACAAG 25 0.006019214 18.997261 18 TATATGG 25 0.0060278815 18.99253 2 GACAGTG 35 0.0021598455 16.287422 7 TAAGTTG 35 0.0021598455 16.287422 5 TGCAAAT 35 0.0021598455 16.287422 10 GTGCTGG 35 0.002170656 16.27526 1 TCTAAGG 45 6.733482E-4 14.775647 3 CAGAACA 40 0.0052542854 14.251494 4 CGTGCCG 40 0.0052542854 14.251494 11 GCAAATC 40 0.0052542854 14.251494 11 TGACGTG 40 0.0052542854 14.251494 5 TGAGTAC 40 0.0052542854 14.251494 5 CTCGGCA 40 0.0052542854 14.251494 12 CTTGCCT 40 0.0052542854 14.251494 4 CAGCTAG 40 0.0052542854 14.251494 9 GCGCTTA 40 0.0052542854 14.251494 13 ACCGGCG 40 0.00526298 14.247946 19 CTCTAAG 40 0.0052716862 14.244399 2 GTTATAT 55 1.9574491E-4 13.809313 1 CTTATTA 70 7.198236E-6 13.569472 18 >>END_MODULE