##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062124_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 201212 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.530480289445958 32.0 32.0 32.0 32.0 32.0 2 31.25180406735185 32.0 32.0 32.0 32.0 32.0 3 31.447711866091485 32.0 32.0 32.0 32.0 32.0 4 31.59133153092261 32.0 32.0 32.0 32.0 32.0 5 31.488688547402738 32.0 32.0 32.0 32.0 32.0 6 35.15044331352007 36.0 36.0 36.0 36.0 36.0 7 35.16299226686281 36.0 36.0 36.0 36.0 36.0 8 35.110092837405325 36.0 36.0 36.0 36.0 36.0 9 35.20696081744627 36.0 36.0 36.0 36.0 36.0 10 35.04801403494822 36.0 36.0 36.0 36.0 36.0 11 35.24256505576208 36.0 36.0 36.0 36.0 36.0 12 35.12626980498181 36.0 36.0 36.0 36.0 36.0 13 35.19674770888416 36.0 36.0 36.0 36.0 36.0 14 35.1125728087788 36.0 36.0 36.0 36.0 36.0 15 35.10948154185635 36.0 36.0 36.0 36.0 36.0 16 35.13376935769239 36.0 36.0 36.0 36.0 36.0 17 35.106693437767134 36.0 36.0 36.0 36.0 36.0 18 35.10747370932151 36.0 36.0 36.0 36.0 36.0 19 35.07147685028726 36.0 36.0 36.0 36.0 36.0 20 35.04156809733018 36.0 36.0 36.0 36.0 36.0 21 35.03169791066139 36.0 36.0 36.0 36.0 36.0 22 35.02619128083812 36.0 36.0 36.0 36.0 36.0 23 35.03742321531519 36.0 36.0 36.0 36.0 36.0 24 35.01420392421923 36.0 36.0 36.0 36.0 36.0 25 35.016683895592706 36.0 36.0 36.0 36.0 36.0 26 34.96213446514125 36.0 36.0 36.0 36.0 36.0 27 34.95715961274676 36.0 36.0 36.0 36.0 36.0 28 34.93370176729022 36.0 36.0 36.0 32.0 36.0 29 34.91678428721945 36.0 36.0 36.0 32.0 36.0 30 34.90366876727034 36.0 36.0 36.0 32.0 36.0 31 34.89377373118899 36.0 36.0 36.0 32.0 36.0 32 34.85575412997237 36.0 36.0 36.0 32.0 36.0 33 34.80597081684989 36.0 36.0 36.0 32.0 36.0 34 34.80143331411645 36.0 36.0 36.0 32.0 36.0 35 34.78324354412262 36.0 36.0 36.0 32.0 36.0 36 34.79129475379202 36.0 36.0 36.0 32.0 36.0 37 34.75691807645667 36.0 36.0 36.0 32.0 36.0 38 34.74550722620917 36.0 36.0 36.0 32.0 36.0 39 34.70340735145021 36.0 36.0 36.0 32.0 36.0 40 34.67839393276743 36.0 36.0 36.0 32.0 36.0 41 34.60700654036538 36.0 36.0 36.0 32.0 36.0 42 34.58385185774208 36.0 36.0 36.0 32.0 36.0 43 34.52872095103672 36.0 36.0 36.0 32.0 36.0 44 34.44882511977417 36.0 36.0 36.0 32.0 36.0 45 34.387158817565556 36.0 36.0 36.0 32.0 36.0 46 34.32205335665865 36.0 36.0 36.0 32.0 36.0 47 34.230786434208696 36.0 36.0 36.0 32.0 36.0 48 34.15697373914081 36.0 36.0 36.0 32.0 36.0 49 34.12140429000259 36.0 36.0 36.0 32.0 36.0 50 33.703591237103154 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 4.0 21 5.0 22 22.0 23 56.0 24 115.0 25 280.0 26 570.0 27 1104.0 28 1840.0 29 2902.0 30 4519.0 31 6737.0 32 10339.0 33 17013.0 34 37009.0 35 118697.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.94183266140057 21.429104050984037 13.054220251440388 24.574843036175004 2 16.32248348666259 20.318487482666587 37.271683540340256 26.087345490330566 3 18.364212870007755 24.07957775878178 29.38542432856887 28.170785042641594 4 12.496272588116017 16.3946484305111 35.839810746873944 35.26926823449894 5 13.583185893485478 37.98232709778741 32.36834781225772 16.066139196469393 6 31.209868198715785 37.75570045524124 16.286801980001194 14.747629366041787 7 29.313361032145203 32.66753473947876 18.8159751903465 19.20312903802954 8 28.016718684770293 32.46675148599487 17.904498737649842 21.612031091584996 9 26.63459435818937 14.771981790350477 20.112120549470212 38.48130330198994 10 17.37222432061706 25.699262469435226 28.796493250899545 28.132019959048165 11 35.681768482993064 22.914637297974274 21.30290439934 20.10068981969266 12 23.95731864898714 25.653539550325032 27.3104983798183 23.07864342086953 13 27.567441305687534 20.542512375007455 26.708645607617836 25.181400711687175 14 22.927558992505418 20.852633043754846 25.26688269089319 30.95292527284655 15 26.236009780728786 26.510844283641134 22.85400473132815 24.39914120430193 16 25.274588738134284 27.322200685850607 22.688236171164455 24.714974404850654 17 22.292904995725902 26.566009979524086 25.267379679144387 25.87370534560563 18 22.657806978743707 25.974723051920623 26.71523922648364 24.65223074285203 19 25.291235115201875 25.516370792994454 26.865693894996323 22.326700196807348 20 24.978132516947298 24.681430530982247 26.33540743096833 24.005029521102124 21 25.99745542015387 23.14225791702284 27.032681947398764 23.827604715424528 22 24.780828181221796 24.44784605291931 26.479037035564478 24.292288730294416 23 24.367333956225277 24.316641154603104 27.08387173727213 24.23215315189949 24 23.83853845695088 26.011371091187403 26.039202433254477 24.11088801860724 25 24.354533300863274 25.277942060821722 26.708778347108257 23.658746291206743 26 22.863944496352108 25.114804286026676 27.684730532970203 24.336520684651013 27 23.783372761067927 26.15947359004433 26.379142397073736 23.678011251814006 28 23.637990159534812 25.042492917847024 26.872421847820682 24.447095074797474 29 23.706457400440335 25.927011942687027 26.399650118532286 23.966880538340348 30 23.813925749217233 25.38740619253516 27.25460961184832 23.544058446399283 31 23.523681725560362 24.88693404900353 26.812782664877492 24.77660156055862 32 23.14275490527404 25.29521102121146 26.66093473550285 24.90109933801165 33 23.766475160527207 25.77331371886369 26.458163529014172 24.002047591594934 34 23.69365339694846 24.745787982704638 27.3445653794543 24.2159932408926 35 23.911098741625747 25.145617557600943 26.26483509929825 24.67844860147506 36 23.74709261873049 24.898117408504465 26.52128103691629 24.833508935848755 37 24.581902399992046 25.32391692220527 25.371131510021915 24.723049167780765 38 24.15909587897342 25.159036240383276 26.642546170208536 24.039321710434766 39 23.775042119963622 25.58756728011888 26.170040405345635 24.467350194571868 40 23.416595431683994 26.18332902610182 26.731010078921734 23.669065463292448 41 23.613402779158303 26.20370554440093 26.911913802357713 23.27097787408306 42 23.269336858689226 26.38649364591047 25.868127171249792 24.47604232415051 43 23.66728626382911 26.554377106050513 25.386916891146388 24.391419738973987 44 23.758498668045007 25.50693809391277 26.425390640531194 24.309172597511033 45 24.32656753210608 25.995984255099202 25.849369806369527 23.828078406425192 46 25.362066737572437 26.235798137232486 24.691609594147295 23.710525531047782 47 24.611469779878433 26.518958087939286 24.523997674037183 24.345574458145094 48 24.49143907954574 27.154891777043318 24.030217936929997 24.323451206480954 49 24.13421204349814 26.37919723265939 25.061628993459372 24.424961730383092 50 23.21030972923542 26.844360065206157 25.234583117967475 24.71074708759095 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 67.0 1 45.0 2 23.0 3 48.0 4 73.0 5 74.0 6 75.0 7 57.5 8 40.0 9 69.0 10 98.0 11 173.0 12 248.0 13 457.5 14 667.0 15 970.0 16 1273.0 17 1436.5 18 1600.0 19 1708.5 20 1817.0 21 1927.0 22 2037.0 23 1754.0 24 1471.0 25 1801.5 26 2132.0 27 2593.5 28 3055.0 29 3387.0 30 3719.0 31 3677.5 32 3636.0 33 3858.5 34 4081.0 35 4745.5 36 5410.0 37 6679.0 38 7948.0 39 8352.0 40 8756.0 41 9977.0 42 11198.0 43 10723.0 44 10248.0 45 10815.5 46 11383.0 47 11978.0 48 12573.0 49 13434.0 50 14295.0 51 14879.0 52 15463.0 53 14796.5 54 14130.0 55 13901.5 56 13673.0 57 12874.5 58 12076.0 59 10950.0 60 9824.0 61 8822.5 62 7821.0 63 6472.5 64 5124.0 65 4733.5 66 4343.0 67 3894.5 68 3446.0 69 2964.0 70 2482.0 71 2159.0 72 1836.0 73 1577.5 74 1319.0 75 991.5 76 664.0 77 544.5 78 425.0 79 366.5 80 308.0 81 232.5 82 157.0 83 137.5 84 118.0 85 84.5 86 51.0 87 29.0 88 7.0 89 6.5 90 6.0 91 7.5 92 9.0 93 6.0 94 3.0 95 2.0 96 1.0 97 1.5 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.025346400811084826 2 0.005466870763175159 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 9.939765023954834E-4 17 0.0 18 4.969882511977417E-4 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 4.969882511977417E-4 26 0.0 27 0.0 28 9.939765023954834E-4 29 4.969882511977417E-4 30 9.939765023954834E-4 31 9.939765023954834E-4 32 0.0 33 0.0 34 9.939765023954834E-4 35 0.0 36 0.0 37 0.0014909647535932252 38 0.0 39 4.969882511977417E-4 40 0.0 41 0.0 42 0.0014909647535932252 43 0.0029819295071864503 44 0.001987953004790967 45 0.001987953004790967 46 0.0029819295071864503 47 0.002484941255988708 48 0.003478917758384192 49 0.003975906009581934 50 0.001987953004790967 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 201212.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.783651074488596 #Duplication Level Percentage of deduplicated Percentage of total 1 60.69082373855919 21.717392600838917 2 15.202566631019012 10.88006679522096 3 7.631838446688241 8.192851320994771 4 4.373550367356009 6.260064012086754 5 2.9457924195497287 5.270560403952051 6 1.9083068290718184 4.097171142874183 7 1.3319259454729795 3.3362821302904395 8 1.02498576408661 2.934218635071467 9 0.8083221066374078 2.603224459773771 >10 3.7624477437813364 23.99459276782697 >50 0.2319412230385689 5.584656978709023 >100 0.08749878473910085 5.128918752360694 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCATAGGGTCTTCTCGTCTTATTATTATATTTCAGCCTCTTCACTGAAAG 489 0.24302725483569568 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 360 0.178915770431187 No Hit GTATTAGAGGCACTGCCTGCCCAGTGACTAAAGTTTAACGGCCGCGGTAT 261 0.12971393356261057 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 254 0.12623501580422639 No Hit CCATTGGGATGTCCTGATCCAACATCGAGGTCGTAAACCCTAATTGTCGA 239 0.11878019203626025 No Hit CTTCTACACCATTGGGATGTCCTGATCCAACATCGAGGTCGTAAACCCTA 233 0.11579826252907381 No Hit ATAAATAATCCACCTATAACTTCTCTGTTAACCCAACACCGGAATGCCTA 220 0.10933741526350316 No Hit GACTATAGGCAATAATCACACTATAAATAATCCACCTATAACTTCTCTGT 212 0.10536150925392124 No Hit ATCCTGACCGTGCAAAGGTAGCATAATCACTTGTTCCTTAATTAGGGACT 212 0.10536150925392124 No Hit ACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAA 207 0.10287656799793253 No Hit ACCTATAACTTCTCTGTTAACCCAACACCGGAATGCCTAAAGGAAAGATC 206 0.10237957974673478 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 4.969882511977417E-4 0.0 19 0.0 0.0 0.0 4.969882511977417E-4 0.0 20 0.0 0.0 0.0 4.969882511977417E-4 0.0 21 0.0 0.0 0.0 4.969882511977417E-4 0.0 22 0.0 0.0 0.0 9.939765023954834E-4 0.0 23 0.0 0.0 0.0 0.001987953004790967 0.0 24 0.0 0.0 0.0 0.003975906009581934 0.0 25 0.0 0.0 0.0 0.005466870763175159 0.0 26 0.0 0.0 0.0 0.005466870763175159 0.0 27 0.0 0.0 0.0 0.005963859014372901 0.0 28 0.0 0.0 0.0 0.007951812019163867 0.0 29 0.0 0.0 0.0 0.010933741526350318 0.0 30 0.0 0.0 0.0 0.023855436057491602 0.0 31 0.0 0.0 0.0 0.03975906009581934 0.0 32 0.0 0.0 0.0 0.060135578394926746 0.0 33 0.0 0.0 0.0 0.07206329642367254 0.0 34 0.0 0.0 0.0 0.09243981472277996 0.0 35 0.0 0.0 0.0 0.11679223903146929 0.0 36 0.0 0.0 0.0 0.14859948710812476 0.0 37 0.0 0.0 0.0 0.18289167644076895 0.0 38 0.0 0.0 0.0 0.22960857205335666 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTCCGT 20 7.842515E-4 43.99826 22 GGTATTT 30 1.2975841E-4 36.66522 30 GGCAACC 25 0.0023486048 35.19861 29 TGCGCTA 25 0.0023486048 35.19861 10 GCTAGTG 25 0.0023486048 35.19861 25 GTGAGAT 25 0.0023486048 35.19861 27 AACAGGA 25 0.0023486048 35.19861 33 ACGTTAG 40 1.8130704E-5 32.998695 1 ATACATG 55 1.3645513E-7 31.998734 1 GAACAGG 35 3.209154E-4 31.42733 32 ACCAGAA 30 0.0057209693 29.34676 42 GAGTTAA 30 0.005727927 29.339466 41 TTTAGAG 30 0.0057348916 29.332176 2 CCTAGTG 30 0.0057348916 29.332176 3 CGTGAGA 30 0.0057348916 29.332176 26 ATCAGCA 30 0.0057348916 29.332176 34 ACTAGAC 30 0.0057348916 29.332176 3 CTAGTGT 30 0.0057348916 29.332176 4 CTGCAAT 30 0.0057348916 29.332176 11 TCCGTCG 30 0.0057348916 29.332176 33 >>END_MODULE