##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062123_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2407248 Sequences flagged as poor quality 0 Sequence length 25 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.29217596192831 32.0 32.0 32.0 32.0 32.0 2 30.875074358769847 32.0 32.0 32.0 32.0 32.0 3 30.903532166191436 32.0 32.0 32.0 32.0 32.0 4 30.905946541444838 32.0 32.0 32.0 32.0 32.0 5 30.83542161007092 32.0 32.0 32.0 32.0 32.0 6 34.46827871494752 36.0 36.0 36.0 32.0 36.0 7 34.4216711365011 36.0 36.0 36.0 32.0 36.0 8 34.383599861750845 36.0 36.0 36.0 32.0 36.0 9 34.50609824995181 36.0 36.0 36.0 32.0 36.0 10 34.22652173768552 36.0 36.0 36.0 32.0 36.0 11 34.475944314835864 36.0 36.0 36.0 32.0 36.0 12 34.324878865825205 36.0 36.0 36.0 32.0 36.0 13 34.403683376203865 36.0 36.0 36.0 32.0 36.0 14 34.31575641562481 36.0 36.0 36.0 32.0 36.0 15 34.273820146490934 36.0 36.0 36.0 32.0 36.0 16 34.27514904986939 36.0 36.0 36.0 32.0 36.0 17 34.21102063435092 36.0 36.0 36.0 32.0 36.0 18 34.21580452034855 36.0 36.0 36.0 32.0 36.0 19 34.21534507454155 36.0 36.0 36.0 32.0 36.0 20 34.20149191109516 36.0 36.0 36.0 32.0 36.0 21 34.1907410453763 36.0 36.0 36.0 32.0 36.0 22 34.16525800416077 36.0 36.0 36.0 32.0 36.0 23 34.133987856672846 36.0 36.0 36.0 32.0 36.0 24 34.102485078396576 36.0 36.0 36.0 32.0 36.0 25 33.76147035951427 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 1.0 4 23.0 5 185.0 6 531.0 7 105.0 8 462.0 9 327.0 10 190.0 11 47.0 12 99.0 13 100.0 14 328.0 15 497.0 16 884.0 17 1090.0 18 1507.0 19 2045.0 20 2975.0 21 4196.0 22 6188.0 23 8663.0 24 12568.0 25 18148.0 26 25233.0 27 32746.0 28 44359.0 29 58761.0 30 78647.0 31 108189.0 32 155983.0 33 224337.0 34 503063.0 35 1114771.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.04577894833044 17.34660728973671 11.838136938044716 25.769476823888137 2 16.98126610505554 19.128246818660866 36.87204563232348 27.018441443960118 3 19.053870036946908 22.652932530975335 28.13913705250582 30.15406037957194 4 13.15578795093828 15.307587134073867 34.592558648513574 36.94406626647429 5 15.448668375151314 35.91225309287112 32.86245424221281 15.77662428976476 6 35.490697502346514 34.27595649994305 16.16595266737554 14.067393330334896 7 31.1315505370513 29.95664165362229 19.8337611223765 19.07804668694991 8 28.661215411896613 32.56409424665556 18.745446197762273 20.02924414368556 9 27.045436113069353 14.485903762531896 18.400825165896194 40.06783495850256 10 16.82124340261832 26.26365233712038 30.35111714553841 26.56398711472289 11 37.274888988915116 21.23234160380129 21.645102324888697 19.847667082394892 12 24.67801661060746 23.380349300292927 27.997933449417346 23.943700639682262 13 29.336024281760935 19.237064542414675 24.98143802964009 26.445473146184305 14 23.849944893842668 19.288153215912164 24.455114475243818 32.406787415001354 15 25.43078418028709 26.775674421003764 21.646572279062955 26.14696911964619 16 26.200027367166307 25.672772705701895 22.96117730388493 25.16602262324687 17 24.4840721200959 25.905743753046735 24.45333439813128 25.156849728726087 18 25.165023089924276 24.97155347945862 25.29627633382574 24.567147096791366 19 25.8077608077421 24.991776955265387 24.811514508112225 24.38894772888029 20 25.99949770432581 24.199757334639525 24.37535291676611 25.42539204426855 21 26.80320121881496 24.097624949115556 24.195755520156474 24.903418311913008 22 26.2384756455094 23.90886143328246 24.657856106192483 25.194806815015657 23 24.82100605800065 24.108397924705507 25.12754396738134 25.943052049912502 24 25.055799858961908 24.670938834706018 24.824367657037936 25.448893649294146 25 25.13510063578482 24.296659666145402 24.707834610294384 25.860405087775394 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 695.0 1 695.0 2 705.0 3 715.0 4 715.0 5 715.0 6 1538.5 7 2362.0 8 2362.0 9 2362.0 10 2875.0 11 3388.0 12 3388.0 13 3388.0 14 4493.0 15 5598.0 16 5598.0 17 5598.0 18 9787.5 19 13977.0 20 13977.0 21 13977.0 22 21482.5 23 28988.0 24 28988.0 25 28988.0 26 43120.0 27 57252.0 28 57252.0 29 57252.0 30 71768.5 31 86285.0 32 86285.0 33 86285.0 34 110744.5 35 135204.0 36 135204.0 37 135204.0 38 161157.0 39 187110.0 40 187110.0 41 187110.0 42 217536.0 43 247962.0 44 247962.0 45 247962.0 46 276872.5 47 305783.0 48 305783.0 49 305783.0 50 319623.5 51 333464.0 52 333464.0 53 333464.0 54 315668.5 55 297873.0 56 297873.0 57 297873.0 58 276233.0 59 254593.0 60 254593.0 61 254593.0 62 224298.0 63 194003.0 64 194003.0 65 194003.0 66 158387.5 67 122772.0 68 122772.0 69 122772.0 70 93594.5 71 64417.0 72 64417.0 73 64417.0 74 48632.0 75 32847.0 76 32847.0 77 32847.0 78 25941.0 79 19035.0 80 19035.0 81 19035.0 82 13152.0 83 7269.0 84 7269.0 85 7269.0 86 5290.0 87 3311.0 88 3311.0 89 3311.0 90 2213.0 91 1115.0 92 1115.0 93 1115.0 94 695.0 95 275.0 96 275.0 97 275.0 98 615.0 99 955.0 100 955.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0011631539417625437 2 2.907884854406359E-4 3 4.154121220580513E-4 4 0.009928349717187427 5 0.03435458249420085 6 0.06438887891899796 7 0.10950263537450233 8 0.11066578931626488 9 0.1197633147893362 10 0.13559051663974797 11 0.14265252271473483 12 0.13467660997122025 13 0.13039786511402232 14 0.11623231175184277 15 0.13542435179092474 16 0.12076030388227553 17 0.1261191202568244 18 0.11365675659508286 19 0.10057127475025422 20 0.09512937595129375 21 0.09508783473908795 22 0.10626242082244955 23 0.08304088319940446 24 0.09238765594571062 25 0.09093371351850743 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2407248.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.4750992337968 #Duplication Level Percentage of deduplicated Percentage of total 1 74.3061678021543 36.76305025694741 2 14.327141042363797 14.176734496151036 3 4.73993256260018 7.03525901688446 4 2.1299070094049317 4.215094425962734 5 1.1634690659626075 2.8781373746976433 6 0.7184510134391894 2.132726111071546 7 0.4699245615354747 1.627469502005624 8 0.3513796271874157 1.3907633539065534 9 0.24507991126017772 1.0912817636826664 >10 1.3809745452490276 12.339958339158812 >50 0.08987480908492772 3.068303719334647 >100 0.06343301808201315 6.515535437261183 >500 0.009453748803068821 3.1147572384618676 >1k 0.004811282872989957 3.6509289644737075 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 4232 0.17580241005496733 No Hit TATCAACGCAGAGTACTTTTTTTTT 2747 0.1141137099293467 No Hit GCGCAAGACGGACCAGAGCGAAAGC 2440 0.10136055778216452 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.308242441161027E-5 2 0.0 0.0 0.0 0.0 8.308242441161027E-5 3 0.0 0.0 0.0 0.0 8.308242441161027E-5 4 0.0 0.0 0.0 0.0 8.308242441161027E-5 5 0.0 0.0 0.0 0.0 8.308242441161027E-5 6 0.0 0.0 0.0 0.0 8.308242441161027E-5 7 0.0 0.0 0.0 0.0 8.308242441161027E-5 8 0.0 0.0 0.0 0.0 8.308242441161027E-5 9 0.0 0.0 0.0 0.0 8.308242441161027E-5 10 0.0 0.0 0.0 0.0 8.308242441161027E-5 11 0.0 0.0 0.0 0.0 8.308242441161027E-5 12 0.0 0.0 0.0 0.0 2.907884854406359E-4 13 0.0 0.0 0.0 0.0 3.323296976464411E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCGTA 215 0.0 14.142107 9 GGTATCA 1050 0.0 13.745441 1 GCGTTAT 345 0.0 13.210722 1 CGAACGA 110 2.752131E-9 12.953396 16 CGCGTAA 250 0.0 12.542541 10 GTATCAA 2680 0.0 12.223307 1 CGGTCCA 415 0.0 12.134989 10 GGGTATA 55 0.0030809084 12.084807 1 GTATAGA 185 0.0 11.804852 1 CGTTATT 355 0.0 11.771889 2 GCGTAAC 260 0.0 11.694677 11 ACTCTAA 375 0.0 11.40231 10 CGCATCG 365 0.0 11.193117 13 CGCGCTA 85 5.3302494E-5 11.175479 16 CGCATGT 60 0.005869295 11.085349 12 CGAGCCG 465 0.0 11.032198 15 GGTCGCG 305 0.0 10.903621 7 TAACGAA 140 8.341885E-9 10.8584385 13 AGAACCG 245 0.0 10.858213 5 CGCCAGT 395 0.0 10.820925 18 >>END_MODULE