##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062123_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2407248 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.27422185001296 32.0 32.0 32.0 32.0 32.0 2 31.431697523479095 32.0 32.0 32.0 32.0 32.0 3 31.558576847919284 32.0 32.0 32.0 32.0 32.0 4 31.638082158547853 32.0 32.0 32.0 32.0 32.0 5 31.601879822934738 32.0 32.0 32.0 32.0 32.0 6 35.25014788671545 36.0 36.0 36.0 36.0 36.0 7 35.25241354442916 36.0 36.0 36.0 36.0 36.0 8 35.201584132586255 36.0 36.0 36.0 36.0 36.0 9 35.29234628089835 36.0 36.0 36.0 36.0 36.0 10 35.16233557988209 36.0 36.0 36.0 36.0 36.0 11 35.289081557031096 36.0 36.0 36.0 36.0 36.0 12 35.20864489242488 36.0 36.0 36.0 36.0 36.0 13 35.24841561816647 36.0 36.0 36.0 36.0 36.0 14 35.206733581251285 36.0 36.0 36.0 36.0 36.0 15 35.18589900168159 36.0 36.0 36.0 36.0 36.0 16 35.19674291971579 36.0 36.0 36.0 36.0 36.0 17 35.17688331239656 36.0 36.0 36.0 36.0 36.0 18 35.17158514619183 36.0 36.0 36.0 36.0 36.0 19 35.16223297308794 36.0 36.0 36.0 36.0 36.0 20 35.16558451808871 36.0 36.0 36.0 36.0 36.0 21 35.160303383780985 36.0 36.0 36.0 36.0 36.0 22 35.14333629106764 36.0 36.0 36.0 36.0 36.0 23 35.11260451768991 36.0 36.0 36.0 36.0 36.0 24 35.093675848936215 36.0 36.0 36.0 36.0 36.0 25 35.07890670176068 36.0 36.0 36.0 36.0 36.0 26 35.033443168298405 36.0 36.0 36.0 36.0 36.0 27 35.02614022319263 36.0 36.0 36.0 36.0 36.0 28 35.005600170817466 36.0 36.0 36.0 36.0 36.0 29 34.98414164224043 36.0 36.0 36.0 36.0 36.0 30 34.96410423853296 36.0 36.0 36.0 36.0 36.0 31 34.96790276697706 36.0 36.0 36.0 36.0 36.0 32 34.94496121712429 36.0 36.0 36.0 36.0 36.0 33 34.92631378237722 36.0 36.0 36.0 32.0 36.0 34 34.91223961968189 36.0 36.0 36.0 32.0 36.0 35 34.902052468212666 36.0 36.0 36.0 32.0 36.0 36 34.879555409330486 36.0 36.0 36.0 32.0 36.0 37 34.870626956591096 36.0 36.0 36.0 32.0 36.0 38 34.85619387782231 36.0 36.0 36.0 32.0 36.0 39 34.84219448930895 36.0 36.0 36.0 32.0 36.0 40 34.827193957581436 36.0 36.0 36.0 32.0 36.0 41 34.803623473775865 36.0 36.0 36.0 32.0 36.0 42 34.76600250576592 36.0 36.0 36.0 32.0 36.0 43 34.765108538879254 36.0 36.0 36.0 32.0 36.0 44 34.71853668587532 36.0 36.0 36.0 32.0 36.0 45 34.70107732979734 36.0 36.0 36.0 32.0 36.0 46 34.6897901670289 36.0 36.0 36.0 32.0 36.0 47 34.667746738184015 36.0 36.0 36.0 32.0 36.0 48 34.63828280260281 36.0 36.0 36.0 32.0 36.0 49 34.62885253201997 36.0 36.0 36.0 32.0 36.0 50 34.20152057453158 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 3.0 19 4.0 20 26.0 21 56.0 22 186.0 23 492.0 24 1133.0 25 2705.0 26 5709.0 27 11102.0 28 18612.0 29 29614.0 30 44726.0 31 66547.0 32 101715.0 33 174211.0 34 400662.0 35 1549745.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.72841056462775 17.842654179681446 12.26867905586358 26.16025619982722 2 16.406543075245366 19.709653632445345 36.54621176714961 27.33759152515968 3 18.441550025381787 23.14320395407517 28.45701172879458 29.95823429174847 4 12.901880406073996 15.720703243457463 34.73720591912916 36.64021043133938 5 15.103234152222084 36.18915557446144 32.74538622143312 15.962224051883355 6 35.59331750333576 34.55274994973505 15.999416760411492 13.854515786517693 7 31.220588821758287 29.96371790525945 19.857696423467793 18.957996849514466 8 28.815061846556734 32.67203877622912 18.612124716688932 19.900774660525215 9 27.215102058450146 14.26994642845274 18.383731131981413 40.131220381115696 10 16.82806126666686 26.284631365206813 30.437051121052388 26.450256247073938 11 37.52459239762584 21.08382684293434 21.60537676217822 19.7862039972616 12 24.67635241570457 23.325099865074144 28.08476733597868 23.913780383242607 13 29.521303995267623 19.10006779525832 25.052674257076962 26.325953952397096 14 23.930147620851695 19.106631306786838 24.507155058390328 32.45606601397114 15 25.481628814314107 26.73201930170884 21.73938871275415 26.04696317122291 16 26.340839074386096 25.593422132713865 22.900320036689564 25.16541875621047 17 24.5541797106073 25.93014928250018 24.478159292270675 25.03751171462184 18 25.398598482000395 24.76052519745585 25.339485312475208 24.501391008068556 19 25.95656949346308 24.765167527400582 24.918745388925444 24.359517590210896 20 26.13112942623087 24.068684468519965 24.51458932221133 25.285596783037832 21 26.975658511295887 23.990673167035553 24.260732587585494 24.772935734083067 22 26.3574837324613 23.772124849620813 24.758105521325596 25.11228589659229 23 24.942880833217018 23.865384871022844 25.252695193847913 25.939039101912226 24 25.19879728783255 24.5158119761086 24.88366277200396 25.401727964054892 25 25.376540714834356 24.029688735204545 24.962000097206637 25.63177045275446 26 25.156673332674213 24.924540074558475 25.115879692826383 24.802906899940925 27 25.598517140577115 24.413384451328305 24.622212732335484 25.3658856757591 28 25.23100365443357 24.256931148178413 25.232914577978764 25.27915061940925 29 25.183072730596034 24.503290074940594 25.147430252072912 25.166206942390456 30 25.133743154984202 24.58053377622209 25.193023006564403 25.092700062229305 31 25.67932570080258 24.309125803825125 24.442847410312226 25.56870108506007 32 25.551328018517527 24.371591781933862 24.245181085503564 25.831899114045047 33 25.147004147895206 24.14070856933964 24.827177956543682 25.885109326221468 34 25.784937133162543 24.258120637363014 24.943887811348393 25.013054418126053 35 26.05496248403775 24.093796967650118 25.01136154985664 24.839878998455493 36 25.088046672421516 24.632796149624923 24.649703437039673 25.629453740913892 37 26.032534800704717 24.328402168986713 24.633278317984285 25.00578471232428 38 25.22012688347856 24.100092719985643 25.07772360803706 25.602056788498732 39 25.915699026932177 24.19392896073166 24.424691928322652 25.465680084013503 40 25.919610109988895 24.40638522990824 24.733855285901758 24.94014937420111 41 25.02318022751518 24.7783338816828 25.117064303114294 25.081421587687725 42 26.1027052020624 24.662093811523643 24.589018417574984 24.646182568838974 43 25.75698471511319 23.832882800358433 24.828832781020203 25.581299703508176 44 25.327491869045627 24.47254211292233 24.539342851884733 25.66062316614731 45 25.466124402311408 24.65804527270386 24.562456640315055 25.313373684669678 46 25.311928667360974 24.56030884001793 24.59412404697406 25.53363844564704 47 25.39852926148189 24.465422025185838 24.928652315985286 25.207396397346987 48 26.094687117415667 24.946731589943123 23.971926955913407 24.986654336727806 49 25.417910701978645 24.97124196093892 24.176859551511683 25.433987785570757 50 25.506375441071516 25.013438816619765 24.28865664176643 25.191529100542287 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 341.0 1 224.5 2 108.0 3 254.5 4 401.0 5 419.0 6 437.0 7 337.0 8 237.0 9 348.5 10 460.0 11 773.0 12 1086.0 13 2037.0 14 2988.0 15 3795.5 16 4603.0 17 4434.0 18 4265.0 19 3975.0 20 3685.0 21 4426.5 22 5168.0 23 6267.5 24 7367.0 25 9532.5 26 11698.0 27 14683.5 28 17669.0 29 20638.5 30 23608.0 31 27064.0 32 30520.0 33 35852.5 34 41185.0 35 48315.5 36 55446.0 37 66763.0 38 78080.0 39 87207.5 40 96335.0 41 107594.5 42 118854.0 43 123951.0 44 129048.0 45 141413.5 46 153779.0 47 165598.0 48 177417.0 49 184848.5 50 192280.0 51 188802.0 52 185324.0 53 185513.5 54 185703.0 55 186119.5 56 186536.0 57 180754.5 58 174973.0 59 161136.0 60 147299.0 61 129446.0 62 111593.0 63 96378.0 64 81163.0 65 68341.5 66 55520.0 67 47811.5 68 40103.0 69 35442.5 70 30782.0 71 24282.5 72 17783.0 73 15624.5 74 13466.0 75 10037.0 76 6608.0 77 5917.0 78 5226.0 79 4407.0 80 3588.0 81 2825.5 82 2063.0 83 1680.0 84 1297.0 85 1007.5 86 718.0 87 471.0 88 224.0 89 152.0 90 80.0 91 60.0 92 40.0 93 32.0 94 24.0 95 24.0 96 24.0 97 30.0 98 36.0 99 23.0 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.028621895209799738 2 0.005109569101314031 3 4.154121220580513E-4 4 8.308242441161027E-5 5 8.308242441161027E-5 6 1.6616484882322054E-4 7 0.0 8 0.0 9 0.0 10 4.1541212205805134E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 9.969890929393231E-4 17 0.0 18 4.1541212205805134E-5 19 0.0 20 3.323296976464411E-4 21 0.0 22 0.0 23 0.0 24 9.139066685277129E-4 25 2.0770606102902566E-4 26 4.154121220580513E-4 27 2.907884854406359E-4 28 0.0014539424272031797 29 3.323296976464411E-4 30 9.139066685277129E-4 31 3.323296976464411E-4 32 6.23118183087077E-4 33 1.246236366174154E-4 34 7.062006074986873E-4 35 2.492472732348308E-4 36 8.308242441161027E-5 37 0.0017031897004380107 38 0.0 39 6.646593952928821E-4 40 2.0770606102902566E-4 41 9.969890929393231E-4 42 0.0060234757698417445 43 0.004112580008374708 44 0.003697167886316657 45 0.002409390307936698 46 0.0019524369736728415 47 9.139066685277129E-4 48 0.004112580008374708 49 0.0039464151595514875 50 0.0017447309126438157 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2407248.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.4340746740651 #Duplication Level Percentage of deduplicated Percentage of total 1 73.73961869947034 37.18989435926174 2 14.9226467695804 15.052197630234284 3 4.7021812970836745 7.1145048800433095 4 2.1368975253581493 4.310897974589513 5 1.1786128453724547 2.9721124127663363 6 0.726420092013362 2.1981795099205885 7 0.4806806953237361 1.6969880257637189 8 0.33720563022177485 1.3605323148096142 9 0.2649566312800671 1.2026558274630874 >10 1.3567348357384894 12.19912124709159 >50 0.0837288750354693 2.942025727981759 >100 0.058217901014155984 6.010450886087958 >500 0.008203575673291559 2.8268454849805837 >1k 0.0038946268347945286 2.9235937190059906 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2508 0.10418536021215927 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.6616484882322054E-4 2 0.0 0.0 0.0 0.0 1.6616484882322054E-4 3 0.0 0.0 0.0 0.0 1.6616484882322054E-4 4 0.0 0.0 0.0 0.0 1.6616484882322054E-4 5 0.0 0.0 0.0 0.0 1.6616484882322054E-4 6 0.0 0.0 0.0 0.0 1.6616484882322054E-4 7 0.0 0.0 0.0 0.0 1.6616484882322054E-4 8 0.0 0.0 0.0 0.0 2.0770606102902568E-4 9 0.0 0.0 0.0 0.0 2.0770606102902568E-4 10 0.0 0.0 0.0 0.0 2.0770606102902568E-4 11 0.0 0.0 0.0 0.0 2.0770606102902568E-4 12 0.0 0.0 0.0 4.1541212205805134E-5 3.323296976464411E-4 13 0.0 0.0 0.0 4.1541212205805134E-5 4.5695333426385646E-4 14 0.0 0.0 0.0 4.1541212205805134E-5 4.984945464696617E-4 15 0.0 0.0 0.0 1.6616484882322054E-4 5.400357586754668E-4 16 0.0 0.0 0.0 2.0770606102902568E-4 6.23118183087077E-4 17 0.0 0.0 0.0 3.323296976464411E-4 6.23118183087077E-4 18 0.0 0.0 0.0 3.738709098522462E-4 6.646593952928821E-4 19 0.0 0.0 0.0 3.738709098522462E-4 6.646593952928821E-4 20 0.0 0.0 0.0 4.1541212205805137E-4 7.062006074986873E-4 21 0.0 0.0 0.0 5.815769708812719E-4 7.477418197044924E-4 22 0.0 0.0 0.0 7.477418197044924E-4 7.892830319102975E-4 23 0.0 0.0 0.0 9.969890929393233E-4 8.308242441161027E-4 24 0.0 0.0 0.0 0.0014539424272031797 8.308242441161027E-4 25 0.0 4.1541212205805134E-5 0.0 0.0020355193980844516 8.308242441161027E-4 26 0.0 4.1541212205805134E-5 0.0 0.002783261217788944 9.139066685277129E-4 27 0.0 4.1541212205805134E-5 0.0 0.003115590915435385 9.554478807335181E-4 28 0.0 4.1541212205805134E-5 0.0 0.004071038796168903 9.554478807335181E-4 29 0.0 4.1541212205805134E-5 0.0 0.005151110313519836 9.554478807335181E-4 30 0.0 4.1541212205805134E-5 0.0 0.007477418197044924 9.554478807335181E-4 31 0.0 4.1541212205805134E-5 0.0 0.011589998205419633 9.554478807335181E-4 32 0.0 4.1541212205805134E-5 0.0 0.016616484882322053 9.554478807335181E-4 33 0.0 4.1541212205805134E-5 0.0 0.021809136408047696 9.969890929393233E-4 34 0.0 4.1541212205805134E-5 0.0 0.027707988541272027 0.0010800715173509335 35 0.0 4.1541212205805134E-5 0.0 0.03402225279655441 0.0010800715173509335 36 0.0 4.1541212205805134E-5 0.0 0.04311977826962573 0.0010800715173509335 37 0.0 4.1541212205805134E-5 0.0 0.057534578905040115 0.0010800715173509335 38 0.0 4.1541212205805134E-5 0.0 0.07410952257515636 0.0011216127295567387 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2920 0.0 27.580746 1 GGTATCA 1200 0.0 26.038435 1 GTATAGG 305 0.0 18.03632 1 ACCGTCG 610 0.0 18.031824 8 TCAACGC 4470 0.0 17.520319 4 ATCAACG 4500 0.0 17.403515 3 TACCGTC 660 0.0 17.332407 7 AACGCAG 4630 0.0 17.057405 6 CAACGCA 4620 0.0 16.951477 5 ATACGAA 520 0.0 16.924635 40 TATCAAC 4755 0.0 16.748837 2 CGCAATA 560 0.0 16.50152 36 CAATACG 565 0.0 15.96574 38 CGTCGTA 720 0.0 15.8883705 10 GTATTAT 250 0.0 15.843104 1 GTTCTAG 295 0.0 15.664085 1 GTATTAC 270 0.0 15.484515 1 CCGTCGT 725 0.0 15.475036 9 CGAATGC 555 0.0 15.461205 43 ATACCGT 740 0.0 15.458635 6 >>END_MODULE