##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062120_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 276696 Sequences flagged as poor quality 0 Sequence length 50 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.2545790325845 32.0 32.0 32.0 32.0 32.0 2 31.499367536935843 32.0 32.0 32.0 32.0 32.0 3 31.598855783965075 32.0 32.0 32.0 32.0 32.0 4 31.6796122820713 32.0 32.0 32.0 32.0 32.0 5 31.656988174747738 32.0 32.0 32.0 32.0 32.0 6 35.28472402925955 36.0 36.0 36.0 36.0 36.0 7 35.30713129210397 36.0 36.0 36.0 36.0 36.0 8 35.2640695926215 36.0 36.0 36.0 36.0 36.0 9 35.335631884812216 36.0 36.0 36.0 36.0 36.0 10 35.23172723855784 36.0 36.0 36.0 36.0 36.0 11 35.33898213201492 36.0 36.0 36.0 36.0 36.0 12 35.267087344956195 36.0 36.0 36.0 36.0 36.0 13 35.3071818891491 36.0 36.0 36.0 36.0 36.0 14 35.27590207303322 36.0 36.0 36.0 36.0 36.0 15 35.24889409315639 36.0 36.0 36.0 36.0 36.0 16 35.261518055916966 36.0 36.0 36.0 36.0 36.0 17 35.24142741492468 36.0 36.0 36.0 36.0 36.0 18 35.25808468499725 36.0 36.0 36.0 36.0 36.0 19 35.22512793824269 36.0 36.0 36.0 36.0 36.0 20 35.23932402347703 36.0 36.0 36.0 36.0 36.0 21 35.21668184578021 36.0 36.0 36.0 36.0 36.0 22 35.21419897649406 36.0 36.0 36.0 36.0 36.0 23 35.195608176482494 36.0 36.0 36.0 36.0 36.0 24 35.18247101512129 36.0 36.0 36.0 36.0 36.0 25 35.16181296440859 36.0 36.0 36.0 36.0 36.0 26 35.12531442449475 36.0 36.0 36.0 36.0 36.0 27 35.11483722207766 36.0 36.0 36.0 36.0 36.0 28 35.100174921213174 36.0 36.0 36.0 36.0 36.0 29 35.073239222829386 36.0 36.0 36.0 36.0 36.0 30 35.03927776332148 36.0 36.0 36.0 36.0 36.0 31 35.02708026136988 36.0 36.0 36.0 36.0 36.0 32 35.02356376673317 36.0 36.0 36.0 36.0 36.0 33 35.0096423511724 36.0 36.0 36.0 36.0 36.0 34 34.972594471911414 36.0 36.0 36.0 36.0 36.0 35 34.965084424783875 36.0 36.0 36.0 36.0 36.0 36 34.93914259692948 36.0 36.0 36.0 36.0 36.0 37 34.93346127157603 36.0 36.0 36.0 36.0 36.0 38 34.91293694162547 36.0 36.0 36.0 36.0 36.0 39 34.84477187960795 36.0 36.0 36.0 36.0 36.0 40 34.84055786856333 36.0 36.0 36.0 32.0 36.0 41 34.821059935814034 36.0 36.0 36.0 32.0 36.0 42 34.793564055859136 36.0 36.0 36.0 32.0 36.0 43 34.79154740220314 36.0 36.0 36.0 32.0 36.0 44 34.713562899355246 36.0 36.0 36.0 32.0 36.0 45 34.68215297655188 36.0 36.0 36.0 32.0 36.0 46 34.643204094023766 36.0 36.0 36.0 32.0 36.0 47 34.61059429843583 36.0 36.0 36.0 32.0 36.0 48 34.571905629282675 36.0 36.0 36.0 32.0 36.0 49 34.503173157544744 36.0 36.0 36.0 32.0 36.0 50 34.10951007604013 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 1.0 21 4.0 22 12.0 23 29.0 24 112.0 25 265.0 26 585.0 27 1150.0 28 2025.0 29 3324.0 30 5067.0 31 7776.0 32 11308.0 33 19025.0 34 42369.0 35 183644.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.842571837626 22.83113277126206 14.025510130298342 24.300785260813605 2 13.840637853389136 22.687022459320943 40.6313476315428 22.840992055747115 3 16.065342705867472 28.10350747212635 30.126673774372502 25.70447604763368 4 11.159178303987046 18.492497181021772 40.12815508717148 30.220169427819698 5 12.184129875386706 38.606629658542225 35.791988319310725 13.417252146760344 6 28.374822910342033 40.816274900974356 18.284326481047792 12.524575707635819 7 26.683074565588228 31.674834475380926 24.304652036892474 17.337438922138375 8 24.153222308960014 36.74682684245526 21.515309220227252 17.584641628357474 9 25.26924856159829 15.354757567872321 22.63169688033076 36.74429699019863 10 15.50262924881187 27.41249390122698 33.680044814687655 23.404832035273497 11 31.985644895480963 25.199858328273628 24.819657674848933 17.99483910139648 12 20.613959001937143 27.49660276982681 31.210064475091798 20.679373753144244 13 26.948347645068953 22.201260589238732 28.12653598172724 22.723855783965075 14 20.461806459074218 21.29954896348339 29.14462081128748 29.094023766154915 15 23.539552432995055 30.66759186977766 22.743733194552867 23.049122502674415 16 22.294865122733974 28.581186572989854 26.9931621707578 22.130786133518374 17 19.662373145979704 30.416775088906235 27.78681296440859 22.134038800705465 18 19.757784716801112 29.792985803914767 29.45651545378321 20.99271402550091 19 22.671895046892786 27.41827644156924 28.379262364697595 21.530566146840382 20 22.408708474282243 27.920172319079423 28.583355017781248 21.087764188857086 21 22.835530690721946 27.567438633012404 27.55153670454217 22.045493971723477 22 22.045493971723477 27.595628415300546 28.824775204556623 21.534102408419347 23 21.779498077312283 28.837063058374536 28.340489201144937 21.042949663168244 24 21.837763602522635 27.63692874826072 28.668389381810293 21.85691826740635 25 21.77046289068147 27.731517622228 29.05354613004886 21.444473357041662 26 21.076636729973437 28.408897883951646 29.466379949041364 21.048085437033556 27 20.875768899940006 28.987256680665286 28.493570514720233 21.64340390467448 28 21.127101614791897 27.021381174735808 29.549462940742778 22.302054269729517 29 20.80536912751678 27.804100573559865 28.492227848192762 22.898302450730593 30 20.724562779418196 28.09126426229982 28.33738719365646 22.846785764625523 31 22.663023639918613 27.34691517313412 28.700039393840825 21.29002179310644 32 20.78708740074668 28.41509120282192 28.96407906292579 21.833742333505608 33 20.917255461790056 29.31964798785667 28.54840166970852 21.214694880644753 34 21.656414667466585 26.796388790505034 30.09208728776193 21.455109254266446 35 21.205944429988147 28.633229247983344 28.377714170063896 21.783112151964612 36 21.235656589385425 28.184824445689298 28.37456405066951 22.20495491425577 37 22.855098286536244 27.07099255125754 28.22643309684811 21.84747606535811 38 21.5579553011247 28.142437910197472 29.06980946598433 21.229797322693496 39 21.642632549062128 28.1914778271712 28.392786150565613 21.773103473201054 40 21.650114204759014 27.602133749674735 29.220877786451556 21.526874259114695 41 22.32229338036517 27.75107339568907 28.681711072239167 21.24492215170659 42 21.356647703862194 28.248313948865484 28.583717047007035 21.811321300265288 43 21.192823685884463 28.194211530677155 29.000896316428616 21.612068467009774 44 20.197624744294977 28.317659729802013 29.194827349414137 22.289888176488873 45 21.790089992410277 28.13762694712494 28.243521630705843 21.828761429758934 46 21.85052531904051 27.371164014471123 28.226998543491067 22.5513121229973 47 21.14460226245979 28.865155950702952 28.651198091727203 21.339043695110053 48 20.78919501096907 28.842338093224473 27.771814360631325 22.596652535175128 49 21.7664258375108 27.856066328614336 28.253633219243685 22.123874614631184 50 20.727454091387145 28.152704641639954 28.371721523287714 22.748119743685194 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 302.0 1 165.5 2 29.0 3 66.5 4 104.0 5 103.5 6 103.0 7 79.5 8 56.0 9 82.5 10 109.0 11 188.0 12 267.0 13 462.0 14 657.0 15 859.0 16 1061.0 17 1088.5 18 1116.0 19 1125.0 20 1134.0 21 1322.5 22 1511.0 23 1873.5 24 2236.0 25 3059.0 26 3882.0 27 5234.5 28 6587.0 29 7552.5 30 8518.0 31 10087.0 32 11656.0 33 13715.0 34 15774.0 35 17671.0 36 19568.0 37 19822.0 38 20076.0 39 21915.0 40 23754.0 41 23726.5 42 23699.0 43 21191.5 44 18684.0 45 17456.5 46 16229.0 47 15606.0 48 14983.0 49 14537.0 50 14091.0 51 13594.0 52 13097.0 53 12496.0 54 11895.0 55 11203.0 56 10511.0 57 9920.5 58 9330.0 59 8737.5 60 8145.0 61 7293.0 62 6441.0 63 5289.0 64 4137.0 65 3350.5 66 2564.0 67 2191.5 68 1819.0 69 1415.0 70 1011.0 71 860.0 72 709.0 73 529.5 74 350.0 75 310.0 76 270.0 77 198.0 78 126.0 79 87.0 80 48.0 81 33.0 82 18.0 83 11.5 84 5.0 85 6.0 86 7.0 87 7.5 88 8.0 89 9.0 90 10.0 91 7.5 92 5.0 93 3.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 1.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03614074652326019 2 0.006505334374186833 3 3.6140746523260185E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 3.6140746523260185E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 3.6140746523260185E-4 20 0.0 21 0.0 22 0.0 23 0.0 24 3.6140746523260185E-4 25 0.0 26 3.6140746523260185E-4 27 7.228149304652037E-4 28 0.0014456298609304074 29 0.0010842223956978054 30 0.0018070373261630092 31 0.0010842223956978054 32 0.0018070373261630092 33 3.6140746523260185E-4 34 7.228149304652037E-4 35 0.0 36 3.6140746523260185E-4 37 0.0018070373261630092 38 0.0 39 0.0021684447913956108 40 0.0 41 0.0014456298609304074 42 0.005059704513256426 43 0.002891259721860815 44 0.0036140746523260184 45 0.0021684447913956108 46 0.002529852256628213 47 0.0021684447913956108 48 0.0032526671870934166 49 0.004698297048023823 50 0.0018070373261630092 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 276696.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.623095382658224 #Duplication Level Percentage of deduplicated Percentage of total 1 56.314109273602675 15.55570011854165 2 14.033389156374293 7.752912944169775 3 7.672179191961483 6.3578801283719315 4 4.873613146326146 5.384971231965768 5 3.316673644546787 4.580839621823228 6 2.4073686414067406 3.989938416167924 7 1.7806677831274857 3.443128921270998 8 1.4169457818714675 3.1312342787752625 9 1.0715407159305004 2.663934426229508 >10 6.5339124973832945 32.4926995692023 >50 0.44091480008373457 8.174675456096221 >100 0.13737701486288464 6.274395003903201 >500 0.0013083525225036634 0.19768988348223324 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CATTTACACCTACTACCCAACTATCCATAAATCTAAGTATAGCCATTCCA 547 0.19768988348223324 No Hit GTATAGGGGTCCTAGGAAGATAATAGTTGTTAGGGCGTTTATTAGAATAA 471 0.17022291612455548 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 447 0.16154913695897302 No Hit GTATAGTAGGGGTGAAATGGAATTTTATCTGCATCTGAGTTTAATCCTGT 432 0.156128024980484 No Hit GTATTGGAATTAGTGAAATTGGAGTTCCTTGTGGAAGGAAGTGGGCAAGT 416 0.15034550553676235 No Hit GATATAGGCTTACTAGGAGGGTGAATACGTAGGCTTGAATTAATGCTACT 400 0.14456298609304075 No Hit GTGTAAATGTATGTGGTAAAAGGCCTAGGAGATTTGTTGATCCAATAAAT 393 0.14203313383641253 No Hit ATCCTATTCCCATCCTCAAAACGCCTAATCAACAACCGTCTCCATTCTTT 347 0.12540839043571284 No Hit ATTAATAAGTGTCCTGCAGTAATGTTAGCTGTAAGCCGGACTGCTAATGC 319 0.11528898140919998 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 287 0.10372394252175672 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 0.0 0.0 22 0.0 0.0 0.0 0.0 0.0 23 0.0 0.0 0.0 0.0 0.0 24 0.0 0.0 0.0 0.0 0.0 25 0.0 0.0 0.0 3.6140746523260185E-4 0.0 26 0.0 0.0 0.0 7.228149304652037E-4 0.0 27 0.0 0.0 0.0 7.228149304652037E-4 0.0 28 0.0 0.0 0.0 0.0010842223956978056 0.0 29 0.0 0.0 0.0 0.0014456298609304074 0.0 30 0.0 0.0 0.0 0.004698297048023824 0.0 31 0.0 0.0 0.0 0.012287853817908463 0.0 32 0.0 0.0 0.0 0.01770896579639749 0.0 33 0.0 0.0 0.0 0.02313007777488652 0.0 34 0.0 0.0 0.0 0.03288807933616677 0.0 35 0.0 0.0 0.0 0.04481452568884263 0.0 36 0.0 0.0 0.0 0.0592708242981467 0.0 37 0.0 0.0 0.0 0.08167808714256802 0.0 38 0.0 0.0 0.0 0.11275912915257177 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GACTTAT 20 7.8422966E-4 44.004337 1 CTGGGCT 25 0.0023485315 35.203472 37 CGCCAGC 25 0.0023485315 35.203472 42 GGGCCCG 30 0.0057346923 29.336224 34 AGGGCCC 30 0.0057346923 29.336224 33 AGTAGTG 30 0.005739762 29.330923 7 GTAAAGG 30 0.005739762 29.330923 3 GGGGTCC 100 6.002665E-11 26.397831 6 AATAACC 50 8.323276E-5 26.397831 2 AGATAAT 105 1.10958354E-10 25.140793 18 TTCGTTT 45 0.0013946911 24.446856 28 TTAGAAT 110 1.9826984E-10 24.002367 42 CGTTTAT 110 1.9826984E-10 24.002367 36 AGGGGTC 110 2.0008883E-10 23.99803 5 TCGGTTT 55 1.5901768E-4 23.99803 13 GTCGGTT 55 1.5901768E-4 23.99803 12 GCGTTTA 115 3.4742698E-10 22.958784 35 TAGGGCG 115 3.4742698E-10 22.958784 31 GAAGATA 125 4.0017767E-11 22.87812 16 TTTAATC 145 0.0 22.760866 40 >>END_MODULE